Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89055274

Identifier: 89055274

GI number: 89055274

Start: 2801095

End: 2801802

Strand: Direct

Name: 89055274

Synonym: Jann_2783

Alternate gene names: NA

Gene position: 2801095-2801802 (Clockwise)

Preceding gene: 89055273

Following gene: 89055275

Centisome position: 64.87

GC content: 62.99

Gene sequence:

>708_bases
ATGATAAATTTAGTAAAATCCTTTGCCACCGATGACGGTGGCGCTGTTACCGTCGATTGGGTGGTCCTGACCAGTGGTGT
CGTGGGCCTCGGGCTGGCTGTGATGGCGGTGGCCTCGGGCGGGGTCGAGGATCTGAGTGTGGAGGTTGCCGAAGCGCTGG
CAGATATCAGTCTCGTATCGGGTCAGGTCGTGGAGGTTGCGTTTCACGACTTCTCGGATGGGGATGCAGCGGGATGGCTT
GGCGGTCGTGTGATGGATATGGGCGGCCAGTTGGGAGAGCTTCTGGTTCTTGGCCCCGGTGAGACTGCGGGCTTCACGCT
GGAGGTTCCATCGGGGACGGCGGAGGCCGCCATGGTCTTCGATCTCGTGGCGGGCGATAGCCTGGACAACAGCACCCGTT
GGGGCACGGACACGGCAACGGTCCTGATCAATGGCGTGCCCGTGGCCATCGCGACCAGCGCCCGCGGAAGCCAGATGACG
TTCGATATCCCCCAGGTCGATGGCACCATGGTCGAAGCGACTGTAACGGTGGATCCCGGTCAGCTGGGTGGCTCGGGCCG
CTGGTACGACGCGGTGGCCGAAGTGACCGTAACCGTGGACCAGCCCGTCGGGCCGATCGACGTCCAATTACATTCCGGGG
CCAACCAGAACATCCGGGACGAGTTCTGGGGGGTCGACAACTTCAACGCCTCTGTCACGGGGGGCTAG

Upstream 100 bases:

>100_bases
GTTTGCCTTGCAGTGATCAATCAAGCACCGCTCCGTCGTCCTGCTATCGCCTTGTTTCACGGACTTATCTGACGCCAGAC
ACTTTTTGGGATCCAGCGTA

Downstream 100 bases:

>100_bases
AGTATGACTGGCCAGACGCATGTCAGATTGGCCAATGCTGCAACCGCTTGTGTCAATCCGCCGATCCGGGCCATTGACCC
GTCGCGCTGACCGCAACCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MINLVKSFATDDGGAVTVDWVVLTSGVVGLGLAVMAVASGGVEDLSVEVAEALADISLVSGQVVEVAFHDFSDGDAAGWL
GGRVMDMGGQLGELLVLGPGETAGFTLEVPSGTAEAAMVFDLVAGDSLDNSTRWGTDTATVLINGVPVAIATSARGSQMT
FDIPQVDGTMVEATVTVDPGQLGGSGRWYDAVAEVTVTVDQPVGPIDVQLHSGANQNIRDEFWGVDNFNASVTGG

Sequences:

>Translated_235_residues
MINLVKSFATDDGGAVTVDWVVLTSGVVGLGLAVMAVASGGVEDLSVEVAEALADISLVSGQVVEVAFHDFSDGDAAGWL
GGRVMDMGGQLGELLVLGPGETAGFTLEVPSGTAEAAMVFDLVAGDSLDNSTRWGTDTATVLINGVPVAIATSARGSQMT
FDIPQVDGTMVEATVTVDPGQLGGSGRWYDAVAEVTVTVDQPVGPIDVQLHSGANQNIRDEFWGVDNFNASVTGG
>Mature_235_residues
MINLVKSFATDDGGAVTVDWVVLTSGVVGLGLAVMAVASGGVEDLSVEVAEALADISLVSGQVVEVAFHDFSDGDAAGWL
GGRVMDMGGQLGELLVLGPGETAGFTLEVPSGTAEAAMVFDLVAGDSLDNSTRWGTDTATVLINGVPVAIATSARGSQMT
FDIPQVDGTMVEATVTVDPGQLGGSGRWYDAVAEVTVTVDQPVGPIDVQLHSGANQNIRDEFWGVDNFNASVTGG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23916; Mature: 23916

Theoretical pI: Translated: 3.53; Mature: 3.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINLVKSFATDDGGAVTVDWVVLTSGVVGLGLAVMAVASGGVEDLSVEVAEALADISLVS
CCCCHHHHCCCCCCEEEEEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC
GQVVEVAFHDFSDGDAAGWLGGRVMDMGGQLGELLVLGPGETAGFTLEVPSGTAEAAMVF
CEEEEEEEECCCCCCCCCCCCCEEEECCCCCCCEEEECCCCCCCEEEECCCCCCCCEEEE
DLVAGDSLDNSTRWGTDTATVLINGVPVAIATSARGSQMTFDIPQVDGTMVEATVTVDPG
EEECCCCCCCCCCCCCCEEEEEEECCCEEEEECCCCCEEEEECCCCCCEEEEEEEEECCC
QLGGSGRWYDAVAEVTVTVDQPVGPIDVQLHSGANQNIRDEFWGVDNFNASVTGG
CCCCCCCEEEEEEEEEEEECCCCCCEEEEEECCCCCCCHHHHCCCCCCCEEECCC
>Mature Secondary Structure
MINLVKSFATDDGGAVTVDWVVLTSGVVGLGLAVMAVASGGVEDLSVEVAEALADISLVS
CCCCHHHHCCCCCCEEEEEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC
GQVVEVAFHDFSDGDAAGWLGGRVMDMGGQLGELLVLGPGETAGFTLEVPSGTAEAAMVF
CEEEEEEEECCCCCCCCCCCCCEEEECCCCCCCEEEECCCCCCCEEEECCCCCCCCEEEE
DLVAGDSLDNSTRWGTDTATVLINGVPVAIATSARGSQMTFDIPQVDGTMVEATVTVDPG
EEECCCCCCCCCCCCCCEEEEEEECCCEEEEECCCCCEEEEECCCCCCEEEEEEEEECCC
QLGGSGRWYDAVAEVTVTVDQPVGPIDVQLHSGANQNIRDEFWGVDNFNASVTGG
CCCCCCCEEEEEEEEEEEECCCCCCEEEEEECCCCCCCHHHHCCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA