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The map label for this gene is ybdA [C]

Identifier: 89055263

GI number: 89055263

Start: 2788240

End: 2789442

Strand: Reverse

Name: ybdA [C]

Synonym: Jann_2772

Alternate gene names: 89055263

Gene position: 2789442-2788240 (Counterclockwise)

Preceding gene: 89055265

Following gene: 89055262

Centisome position: 64.6

GC content: 65.67

Gene sequence:

>1203_bases
ATGAAAATCGCAGGAGGCGCCTTCGCTGACCGTCAATTCAAGCTGTTCTTCGGTGGAGTTTTCTTTGCGGTGCAGGCGAT
CTGGATCCAGCGGGTCACGTTGGGCTGGCTCGCGTGGGAGCGGACAGGCCAGGCCTCTGCCGTGGGATTGGTCGCCGCCC
TCAGCCTTGTGCCGACCCTCTTTCTGGGTCCGTTCTTTGGCGTCATGACAGACCGCGTCGACATCCGCCGCGCGGCGTTT
GTGACCAACGGGTTGATGGCATTGGTCATCGCTGTCCTGGCTCTTCTGGCAAGCGATGTCGGAGCCACGGGCCTTGCCAT
CGCCGCCCTCAGCATTGGCCTTATTTCCGCCGCGCATCACCCGATCCGCATGTCCCTTGGCCCCCGGCTCGTGGCCTCCG
ACATGGTGCAGCATGTCGTGGCGATCACAGCGCTGAACTTTAATATCGCGCGCCTGATCGCGCCGGTTCTTGCGGGTTGG
ATCATTGCGACCGCGGGCGGTGCCGTGGCGCTGTGGGTCGCGGCGCTATGCTATGTGCCGATGCTGCTGATCTTGCCCGC
GCTGCATCCGCGCGCCTTACCGCACCGGTCCCCCGCGCCCTTCCTGACCGATATGGTCGAGGGATTTCGATATGGCGCCT
CGACCCCGCTGATCCGCCAGGCTCTGTTGATCACGCTCGTCTTCGCCACCACCGCGCGCGGTGCGCTGGAAATCTTGCCG
GTGCTGGCCGATGGCGGATTTGGGCGTGGGGCGGCGGGCCTGGGGTATCTGACGGCGGCGGCGGGTGTCGGAGCCTTGAC
CTCCGCGCTTTTGAAAGCCGTAGGAGTTGCGGCCGTCGGTGCGCGCATCCCGCTTGCCGTTTGGGTGGCGAGCTTTGCAG
GGCAGGGGGCCGTGATCGCGATGGGCCTCGCGCCAACCTGGCCCCTTGTGTTGATAGCGGTTGCCGTGACCGGCCTGACG
TCCACCTGGTGCGGGGTCAGTTTGCAGGCGGCGATCCAGTCCGACCTGCCTGATACGTTCCGGGGCCGGGTAATGAGCCT
GTGGGTCGTCGTGGGCTTCGGCACTGTCGCGGTGGGCGCCATGGGGATCGGAGCTGCGGCGGATGTGATCGGTATCGGTG
GGGCCCTCGCGATCGCGGGCGCATTAGGCGCAATAGGAATGGCGGTTGTGGGGGTGCGCGTCCGCGCAAACCATCCTATG
TGA

Upstream 100 bases:

>100_bases
AAGATAAGCGAATGCTGCACATGCACAATGGACGATACGGAAATGCTGCTATGCAGCGTGCGCATGACACATTTTCGTTA
CTTTCCCTAGGGTTAATCCC

Downstream 100 bases:

>100_bases
AAGGAAACGCTGCCCCTATGAAGGATGCGCCCCATGGCTCAGACCCGCGAAACGATCCTCGATGCCCTGTCCAAGATCGG
TCTGCCCGACGGCGGAGACC

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 400; Mature: 400

Protein sequence:

>400_residues
MKIAGGAFADRQFKLFFGGVFFAVQAIWIQRVTLGWLAWERTGQASAVGLVAALSLVPTLFLGPFFGVMTDRVDIRRAAF
VTNGLMALVIAVLALLASDVGATGLAIAALSIGLISAAHHPIRMSLGPRLVASDMVQHVVAITALNFNIARLIAPVLAGW
IIATAGGAVALWVAALCYVPMLLILPALHPRALPHRSPAPFLTDMVEGFRYGASTPLIRQALLITLVFATTARGALEILP
VLADGGFGRGAAGLGYLTAAAGVGALTSALLKAVGVAAVGARIPLAVWVASFAGQGAVIAMGLAPTWPLVLIAVAVTGLT
STWCGVSLQAAIQSDLPDTFRGRVMSLWVVVGFGTVAVGAMGIGAAADVIGIGGALAIAGALGAIGMAVVGVRVRANHPM

Sequences:

>Translated_400_residues
MKIAGGAFADRQFKLFFGGVFFAVQAIWIQRVTLGWLAWERTGQASAVGLVAALSLVPTLFLGPFFGVMTDRVDIRRAAF
VTNGLMALVIAVLALLASDVGATGLAIAALSIGLISAAHHPIRMSLGPRLVASDMVQHVVAITALNFNIARLIAPVLAGW
IIATAGGAVALWVAALCYVPMLLILPALHPRALPHRSPAPFLTDMVEGFRYGASTPLIRQALLITLVFATTARGALEILP
VLADGGFGRGAAGLGYLTAAAGVGALTSALLKAVGVAAVGARIPLAVWVASFAGQGAVIAMGLAPTWPLVLIAVAVTGLT
STWCGVSLQAAIQSDLPDTFRGRVMSLWVVVGFGTVAVGAMGIGAAADVIGIGGALAIAGALGAIGMAVVGVRVRANHPM
>Mature_400_residues
MKIAGGAFADRQFKLFFGGVFFAVQAIWIQRVTLGWLAWERTGQASAVGLVAALSLVPTLFLGPFFGVMTDRVDIRRAAF
VTNGLMALVIAVLALLASDVGATGLAIAALSIGLISAAHHPIRMSLGPRLVASDMVQHVVAITALNFNIARLIAPVLAGW
IIATAGGAVALWVAALCYVPMLLILPALHPRALPHRSPAPFLTDMVEGFRYGASTPLIRQALLITLVFATTARGALEILP
VLADGGFGRGAAGLGYLTAAAGVGALTSALLKAVGVAAVGARIPLAVWVASFAGQGAVIAMGLAPTWPLVLIAVAVTGLT
STWCGVSLQAAIQSDLPDTFRGRVMSLWVVVGFGTVAVGAMGIGAAADVIGIGGALAIAGALGAIGMAVVGVRVRANHPM

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40698; Mature: 40698

Theoretical pI: Translated: 11.46; Mature: 11.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIAGGAFADRQFKLFFGGVFFAVQAIWIQRVTLGWLAWERTGQASAVGLVAALSLVPTL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
FLGPFFGVMTDRVDIRRAAFVTNGLMALVIAVLALLASDVGATGLAIAALSIGLISAAHH
HHHHHHHHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC
PIRMSLGPRLVASDMVQHVVAITALNFNIARLIAPVLAGWIIATAGGAVALWVAALCYVP
CEEECCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
MLLILPALHPRALPHRSPAPFLTDMVEGFRYGASTPLIRQALLITLVFATTARGALEILP
HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHH
VLADGGFGRGAAGLGYLTAAAGVGALTSALLKAVGVAAVGARIPLAVWVASFAGQGAVIA
HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEE
MGLAPTWPLVLIAVAVTGLTSTWCGVSLQAAIQSDLPDTFRGRVMSLWVVVGFGTVAVGA
ECCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
MGIGAAADVIGIGGALAIAGALGAIGMAVVGVRVRANHPM
HCCCHHHHHHHCCHHHHHHHHHHHHHHHHHEEEEECCCCC
>Mature Secondary Structure
MKIAGGAFADRQFKLFFGGVFFAVQAIWIQRVTLGWLAWERTGQASAVGLVAALSLVPTL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
FLGPFFGVMTDRVDIRRAAFVTNGLMALVIAVLALLASDVGATGLAIAALSIGLISAAHH
HHHHHHHHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC
PIRMSLGPRLVASDMVQHVVAITALNFNIARLIAPVLAGWIIATAGGAVALWVAALCYVP
CEEECCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
MLLILPALHPRALPHRSPAPFLTDMVEGFRYGASTPLIRQALLITLVFATTARGALEILP
HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHH
VLADGGFGRGAAGLGYLTAAAGVGALTSALLKAVGVAAVGARIPLAVWVASFAGQGAVIA
HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEE
MGLAPTWPLVLIAVAVTGLTSTWCGVSLQAAIQSDLPDTFRGRVMSLWVVVGFGTVAVGA
ECCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
MGIGAAADVIGIGGALAIAGALGAIGMAVVGVRVRANHPM
HCCCHHHHHHHCCHHHHHHHHHHHHHHHHHEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA