| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
Click here to switch to the map view.
The map label for this gene is mrp [H]
Identifier: 89055262
GI number: 89055262
Start: 2787118
End: 2788206
Strand: Reverse
Name: mrp [H]
Synonym: Jann_2771
Alternate gene names: 89055262
Gene position: 2788206-2787118 (Counterclockwise)
Preceding gene: 89055263
Following gene: 89055261
Centisome position: 64.57
GC content: 62.53
Gene sequence:
>1089_bases ATGGCTCAGACCCGCGAAACGATCCTCGATGCCCTGTCCAAGATCGGTCTGCCCGACGGCGGAGACCTTGTCAGCCGTGA CATGATCCGCGCGCTTATGGTGGCAGATGGCAAGGTCAGCTTCATAATCGAGGCCCCATCGCCCGAGATTGCGCAGCAAA TGGCGGGCCTGCGGGATGGGGTGCAGGAATTTGTCGGCAAAATGGACGGTGTAACCTCCGTCTCCGTCGCCCTGACGGCC CATAGTGACAAGCCGTCCGCCCCCGCAGCGCCCAAGGGTCCGCCGCCGACGCTGTCGGTAGGTGGTCATATGAAGCCGCA GGAGGGACCGATGCGGCCCAAGGGCGTGGCGCGGATCATCGGGATCGGTTCGGGCAAAGGGGGCGTGGGCAAATCGACCG TGTCGACAAACCTCGCCGTGGCCCTGGCGCGGCAGGGGCGCAAGGTCGGTCTTCTGGATGCGGACATCTATGGGCCATCG GTGCCGCGTATGATGGGGGTGAACAAACGCCCCGCCTCGCCCGATGGCAAGACGATCATTCCCTTGCATGGCCACGGCGT CACGCTGATGTCCATCGGCTTCATGCTGCCGGCTGAGAAGGCCGTGGTCTGGCGCGGGCCGATGCTGATGGGCGCGCTGC AACAGATGTTGACGCAGGTGGAGTGGGGAGAGCTTGACGTGTTGCTCGTCGATCTGCCGCCGGGCACAGGGGATGTGGCG ATGACGTTGTGCCAGAAATCCGAGGTGACTGGCGCGATTGTTGTCTCAACACCCCAAGACGTGGCGCTGCTGGATGCGCG CAAGGCGCTCAACATGTTTGAGACGTTGAAAACCCCGGTGCTGGGGTTAATCGAGAACATGGCCTCCTATCACTGCCCCA AATGCGGACATGAGGCGCATATTTTTGGGGAAGGTGGCGTGCGGGCAGAAGCCGAAAAGCTGGATCTGCCGTTCCTGGGT GCCCTCCCTATCGATCTTGATACACGGATCGCCGGTGATGAAGGCAACCCGATCGCAGTGGGCGACAGTCCAATGGCGGA GGCTTATGCCGTTCTCGCGCGTCGCTTCATTGACGGTGGGATGGCCTGA
Upstream 100 bases:
>100_bases GGGCGCATTAGGCGCAATAGGAATGGCGGTTGTGGGGGTGCGCGTCCGCGCAAACCATCCTATGTGAAAGGAAACGCTGC CCCTATGAAGGATGCGCCCC
Downstream 100 bases:
>100_bases AGCAGGGCCTCAGTGGGGGTCAAGAGGGCTCCCACCGCAGGTCGCTTTGCGAAATCCGAATCAGAAAAAACAAGAACAAA CAGGGATCACGACCCCGTGA
Product: Mrp/NBP35 family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 362; Mature: 361
Protein sequence:
>362_residues MAQTRETILDALSKIGLPDGGDLVSRDMIRALMVADGKVSFIIEAPSPEIAQQMAGLRDGVQEFVGKMDGVTSVSVALTA HSDKPSAPAAPKGPPPTLSVGGHMKPQEGPMRPKGVARIIGIGSGKGGVGKSTVSTNLAVALARQGRKVGLLDADIYGPS VPRMMGVNKRPASPDGKTIIPLHGHGVTLMSIGFMLPAEKAVVWRGPMLMGALQQMLTQVEWGELDVLLVDLPPGTGDVA MTLCQKSEVTGAIVVSTPQDVALLDARKALNMFETLKTPVLGLIENMASYHCPKCGHEAHIFGEGGVRAEAEKLDLPFLG ALPIDLDTRIAGDEGNPIAVGDSPMAEAYAVLARRFIDGGMA
Sequences:
>Translated_362_residues MAQTRETILDALSKIGLPDGGDLVSRDMIRALMVADGKVSFIIEAPSPEIAQQMAGLRDGVQEFVGKMDGVTSVSVALTA HSDKPSAPAAPKGPPPTLSVGGHMKPQEGPMRPKGVARIIGIGSGKGGVGKSTVSTNLAVALARQGRKVGLLDADIYGPS VPRMMGVNKRPASPDGKTIIPLHGHGVTLMSIGFMLPAEKAVVWRGPMLMGALQQMLTQVEWGELDVLLVDLPPGTGDVA MTLCQKSEVTGAIVVSTPQDVALLDARKALNMFETLKTPVLGLIENMASYHCPKCGHEAHIFGEGGVRAEAEKLDLPFLG ALPIDLDTRIAGDEGNPIAVGDSPMAEAYAVLARRFIDGGMA >Mature_361_residues AQTRETILDALSKIGLPDGGDLVSRDMIRALMVADGKVSFIIEAPSPEIAQQMAGLRDGVQEFVGKMDGVTSVSVALTAH SDKPSAPAAPKGPPPTLSVGGHMKPQEGPMRPKGVARIIGIGSGKGGVGKSTVSTNLAVALARQGRKVGLLDADIYGPSV PRMMGVNKRPASPDGKTIIPLHGHGVTLMSIGFMLPAEKAVVWRGPMLMGALQQMLTQVEWGELDVLLVDLPPGTGDVAM TLCQKSEVTGAIVVSTPQDVALLDARKALNMFETLKTPVLGLIENMASYHCPKCGHEAHIFGEGGVRAEAEKLDLPFLGA LPIDLDTRIAGDEGNPIAVGDSPMAEAYAVLARRFIDGGMA
Specific function: Not Known. [C]
COG id: COG0489
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Mrp/NBP35 ATP-binding proteins family [H]
Homologues:
Organism=Homo sapiens, GI157384956, Length=249, Percent_Identity=47.7911646586345, Blast_Score=238, Evalue=5e-63, Organism=Homo sapiens, GI118572611, Length=253, Percent_Identity=38.7351778656126, Blast_Score=180, Evalue=2e-45, Organism=Homo sapiens, GI6912540, Length=254, Percent_Identity=40.1574803149606, Blast_Score=178, Evalue=7e-45, Organism=Escherichia coli, GI87082045, Length=245, Percent_Identity=50.2040816326531, Blast_Score=242, Evalue=2e-65, Organism=Caenorhabditis elegans, GI25143050, Length=283, Percent_Identity=41.3427561837456, Blast_Score=177, Evalue=8e-45, Organism=Saccharomyces cerevisiae, GI6322188, Length=220, Percent_Identity=40.9090909090909, Blast_Score=175, Evalue=8e-45, Organism=Saccharomyces cerevisiae, GI6321347, Length=259, Percent_Identity=36.6795366795367, Blast_Score=156, Evalue=6e-39, Organism=Drosophila melanogaster, GI221511043, Length=255, Percent_Identity=39.2156862745098, Blast_Score=198, Evalue=5e-51, Organism=Drosophila melanogaster, GI24667611, Length=217, Percent_Identity=44.2396313364055, Blast_Score=173, Evalue=2e-43, Organism=Drosophila melanogaster, GI19921440, Length=256, Percent_Identity=39.0625, Blast_Score=158, Evalue=6e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019591 - InterPro: IPR000808 [H]
Pfam domain/function: PF10609 ParA [H]
EC number: NA
Molecular weight: Translated: 37787; Mature: 37655
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: PS01215 MRP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQTRETILDALSKIGLPDGGDLVSRDMIRALMVADGKVSFIIEAPSPEIAQQMAGLRDG CCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHH VQEFVGKMDGVTSVSVALTAHSDKPSAPAAPKGPPPTLSVGGHMKPQEGPMRPKGVARII HHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCEEEE GIGSGKGGVGKSTVSTNLAVALARQGRKVGLLDADIYGPSVPRMMGVNKRPASPDGKTII EECCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHCCCCCCCCCCCCEEE PLHGHGVTLMSIGFMLPAEKAVVWRGPMLMGALQQMLTQVEWGELDVLLVDLPPGTGDVA EECCCCEEEHHHHHHCCCCCEEEEECHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHH MTLCQKSEVTGAIVVSTPQDVALLDARKALNMFETLKTPVLGLIENMASYHCPKCGHEAH HHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE IFGEGGVRAEAEKLDLPFLGALPIDLDTRIAGDEGNPIAVGDSPMAEAYAVLARRFIDGG EEECCCCCCCHHHCCCCEECCCCCCCCCEEECCCCCEEEECCCCHHHHHHHHHHHHHCCC MA CC >Mature Secondary Structure AQTRETILDALSKIGLPDGGDLVSRDMIRALMVADGKVSFIIEAPSPEIAQQMAGLRDG CCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHH VQEFVGKMDGVTSVSVALTAHSDKPSAPAAPKGPPPTLSVGGHMKPQEGPMRPKGVARII HHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCEEEE GIGSGKGGVGKSTVSTNLAVALARQGRKVGLLDADIYGPSVPRMMGVNKRPASPDGKTII EECCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHCCCCCCCCCCCCEEE PLHGHGVTLMSIGFMLPAEKAVVWRGPMLMGALQQMLTQVEWGELDVLLVDLPPGTGDVA EECCCCEEEHHHHHHCCCCCEEEEECHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHH MTLCQKSEVTGAIVVSTPQDVALLDARKALNMFETLKTPVLGLIENMASYHCPKCGHEAH HHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE IFGEGGVRAEAEKLDLPFLGALPIDLDTRIAGDEGNPIAVGDSPMAEAYAVLARRFIDGG EEECCCCCCCHHHCCCCEECCCCCCCCCEEECCCCCEEEECCCCHHHHHHHHHHHHHCCC MA CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]