| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is murB
Identifier: 89055245
GI number: 89055245
Start: 2770870
End: 2771799
Strand: Reverse
Name: murB
Synonym: Jann_2754
Alternate gene names: 89055245
Gene position: 2771799-2770870 (Counterclockwise)
Preceding gene: 89055246
Following gene: 89055244
Centisome position: 64.19
GC content: 63.01
Gene sequence:
>930_bases ATGACGCAAGACTTACCCACGCCCCGTGGCCGGTTGACGCCGGACAAAGACCTGTCCGGCCTTACGTGGCTGCGCGTCGG CGGTCCGGCGGACTGGCTGTTCCAGCCCGCTGATGTCGATGATCTCTGCGCGTTCATGGCGGAACTGGACCCCGCTGTGC CTGTCTTCCCCATGGGCGTCGGCTCCAACCTTATCGTGCGCGATGGGGGGCTGCGCGGTGTGGTGATCAAATTGGGCCGC CCGTTCATGGATATCTCGGTGGAGGGGGACCGGATCACTGCCGGGGCAGCCGTGCTGGACGCCCGCTTGGCGAAAGAGGC GGCAGATGCGGGCGTTGACCTGACCTTCCTGCGCACGATCCCGGGATCTCTTGGCGGCGCACTCAAGATGAATGCGGGCT GCTATGGGTCATATGTCGCCGATCACTTCGTCGGCGCCCAAGCCGTCCTGCGCGATGGCACACAGGTGACGTTGACCCGG GACGACATCACATTCGCCTACCGCCAAACAGATATCCCCGAGGGAGTGACCATCACCTCCGTCACGCTTCAGGGCAACCG CGAGGACAGCCGCGTGCTTCACACGCGGATGGAGGAGCAGTTGGCCAAACGCGACGCAACCCAACCCACAAAGGCGCTGA CGGCGGGCTCCACGTTCCGCAACCCGGCGGGCTTCTCCTCCACGGGCCAGGCCGATGACACCCACGAGTTGAAAGCCTGG AAGGTCATCGACGACGCGGGCATGCGCGGCGCGACCCGCGGCGGCGCACAGATGAGCGAGATGCATTCCAACTTCCTCGT TAACAAGGGTGGCGCAACTGCCGCAGATTTGGAGGGATTGGGAGAAGAAGTCAGAAAAAGGGTTTTCCAAACCCAGGGCA TAGATTTAGTGTGGGAAATCATGCGGGTCGGTGTACCCGAAGAGACCTAA
Upstream 100 bases:
>100_bases TGGTTCTCTATGGTGTTCTCATGCCGTTCAGTGCCTGTGTGATTGTTGCAAGTCTGATCGGCACCGTCGTGCGGAAGGTC CTCGGTGCCAGAGGAGTGTC
Downstream 100 bases:
>100_bases GCGCAGCCCGAAAAGTGGGAACCGGTTTTCGGATCAAGCTGCGCGATGAAGACAAGGGTGCAGCCCGAAAAGTGGGAACC GGTTTTCGGATCAAGCTGCG
Product: UDP-N-acetylenolpyruvoylglucosamine reductase
Products: NA
Alternate protein names: UDP-N-acetylmuramate dehydrogenase
Number of amino acids: Translated: 309; Mature: 308
Protein sequence:
>309_residues MTQDLPTPRGRLTPDKDLSGLTWLRVGGPADWLFQPADVDDLCAFMAELDPAVPVFPMGVGSNLIVRDGGLRGVVIKLGR PFMDISVEGDRITAGAAVLDARLAKEAADAGVDLTFLRTIPGSLGGALKMNAGCYGSYVADHFVGAQAVLRDGTQVTLTR DDITFAYRQTDIPEGVTITSVTLQGNREDSRVLHTRMEEQLAKRDATQPTKALTAGSTFRNPAGFSSTGQADDTHELKAW KVIDDAGMRGATRGGAQMSEMHSNFLVNKGGATAADLEGLGEEVRKRVFQTQGIDLVWEIMRVGVPEET
Sequences:
>Translated_309_residues MTQDLPTPRGRLTPDKDLSGLTWLRVGGPADWLFQPADVDDLCAFMAELDPAVPVFPMGVGSNLIVRDGGLRGVVIKLGR PFMDISVEGDRITAGAAVLDARLAKEAADAGVDLTFLRTIPGSLGGALKMNAGCYGSYVADHFVGAQAVLRDGTQVTLTR DDITFAYRQTDIPEGVTITSVTLQGNREDSRVLHTRMEEQLAKRDATQPTKALTAGSTFRNPAGFSSTGQADDTHELKAW KVIDDAGMRGATRGGAQMSEMHSNFLVNKGGATAADLEGLGEEVRKRVFQTQGIDLVWEIMRVGVPEET >Mature_308_residues TQDLPTPRGRLTPDKDLSGLTWLRVGGPADWLFQPADVDDLCAFMAELDPAVPVFPMGVGSNLIVRDGGLRGVVIKLGRP FMDISVEGDRITAGAAVLDARLAKEAADAGVDLTFLRTIPGSLGGALKMNAGCYGSYVADHFVGAQAVLRDGTQVTLTRD DITFAYRQTDIPEGVTITSVTLQGNREDSRVLHTRMEEQLAKRDATQPTKALTAGSTFRNPAGFSSTGQADDTHELKAWK VIDDAGMRGATRGGAQMSEMHSNFLVNKGGATAADLEGLGEEVRKRVFQTQGIDLVWEIMRVGVPEET
Specific function: Cell wall formation
COG id: COG0812
COG function: function code M; UDP-N-acetylmuramate dehydrogenase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding PCMH-type domain
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MURB_JANSC (Q28NP1)
Other databases:
- EMBL: CP000264 - RefSeq: YP_510696.1 - ProteinModelPortal: Q28NP1 - SMR: Q28NP1 - STRING: Q28NP1 - GeneID: 3935218 - GenomeReviews: CP000264_GR - KEGG: jan:Jann_2754 - eggNOG: COG0812 - HOGENOM: HBG686573 - OMA: SKKHAGF - ProtClustDB: PRK13905 - BioCyc: JSP290400:JANN_2754-MONOMER - GO: GO:0005737 - HAMAP: MF_00037 - InterPro: IPR016169 - InterPro: IPR016166 - InterPro: IPR016167 - InterPro: IPR003170 - InterPro: IPR011601 - InterPro: IPR006094 - Gene3D: G3DSA:3.30.465.10 - Gene3D: G3DSA:3.30.43.10 - Gene3D: G3DSA:3.90.78.10 - PANTHER: PTHR21071 - TIGRFAMs: TIGR00179
Pfam domain/function: PF01565 FAD_binding_4; PF02873 MurB_C; SSF56176 FAD-binding_2; SSF56194 MurB_C
EC number: =1.1.1.158
Molecular weight: Translated: 33119; Mature: 32988
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: PS51387 FAD_PCMH
Important sites: ACT_SITE 168-168 ACT_SITE 217-217 ACT_SITE 299-299
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQDLPTPRGRLTPDKDLSGLTWLRVGGPADWLFQPADVDDLCAFMAELDPAVPVFPMGV CCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHCCCCCCHHHHHHHHHHCCCCCCEEECCC GSNLIVRDGGLRGVVIKLGRPFMDISVEGDRITAGAAVLDARLAKEAADAGVDLTFLRTI CCEEEEECCCCCEEEEECCCCEEEEEECCCEEECHHHHHHHHHHHHHHHCCCCEEEEECC PGSLGGALKMNAGCYGSYVADHFVGAQAVLRDGTQVTLTRDDITFAYRQTDIPEGVTITS CCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEECCCCCCCEEEEE VTLQGNREDSRVLHTRMEEQLAKRDATQPTKALTAGSTFRNPAGFSSTGQADDTHELKAW EEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEE KVIDDAGMRGATRGGAQMSEMHSNFLVNKGGATAADLEGLGEEVRKRVFQTQGIDLVWEI EEECCCCCCCCCCCCHHHHHHHHCEEEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHH MRVGVPEET HHCCCCCCC >Mature Secondary Structure TQDLPTPRGRLTPDKDLSGLTWLRVGGPADWLFQPADVDDLCAFMAELDPAVPVFPMGV CCCCCCCCCCCCCCCCCCCEEEEEECCCHHHCCCCCCHHHHHHHHHHCCCCCCEEECCC GSNLIVRDGGLRGVVIKLGRPFMDISVEGDRITAGAAVLDARLAKEAADAGVDLTFLRTI CCEEEEECCCCCEEEEECCCCEEEEEECCCEEECHHHHHHHHHHHHHHHCCCCEEEEECC PGSLGGALKMNAGCYGSYVADHFVGAQAVLRDGTQVTLTRDDITFAYRQTDIPEGVTITS CCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEECCCCCCCEEEEE VTLQGNREDSRVLHTRMEEQLAKRDATQPTKALTAGSTFRNPAGFSSTGQADDTHELKAW EEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEE KVIDDAGMRGATRGGAQMSEMHSNFLVNKGGATAADLEGLGEEVRKRVFQTQGIDLVWEI EEECCCCCCCCCCCCHHHHHHHHCEEEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHH MRVGVPEET HHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA