| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89055230
Identifier: 89055230
GI number: 89055230
Start: 2752538
End: 2752969
Strand: Direct
Name: 89055230
Synonym: Jann_2739
Alternate gene names: NA
Gene position: 2752538-2752969 (Clockwise)
Preceding gene: 89055229
Following gene: 89055231
Centisome position: 63.75
GC content: 60.42
Gene sequence:
>432_bases ATGGCCGCCCTCCTCTGCCTCCCGTCCGCTGCAATCGCACAATCTGATCTCAGCGCAGAGCTGGCCGACACACTCGCGCC CGTGGCGGAGGTCGAAAGCCTTGGCGCAACCCTCACCTGCACCGCGCTATACCGGTCGCTGTCGCTCCTCTTCGGATCGC AGAGTGAAAATTTTGAGGATTTTCAATCCCGCGAAGGCGCCATGGCGTCCCTCTCCGGCGTGCTTTGGGCCCGAAGTCCG GATGGCGCAGGACAATCCCCCGATGACGTCTTTGCCGTCCTGTTGCCTCTGATCAATGCGGCCACGGACCAGTATCTCGC GCACATGGACGCCCTTTCCCTGATCGACGGCACGCCCTTCGACGATCAGCTTCTGGGGCAGATCGACTATTGTAACGCGA TTTTTGATAGCTTGGACACAGGCGCGGAATAA
Upstream 100 bases:
>100_bases CCTCCGGCGCTTACGTGCCCGAAAAGGACGAACGCGTCTGCGTGGTCCTTTGCGGCGGCAATGCAGAGCCCGATTGGTTC GCGACATGAGGGGGACGGCC
Downstream 100 bases:
>100_bases CGTCACGAATTACATTATTCGTGATTTGGGTCCCCGCCTCGCCCCTGCTACGGTTCTCGCTGAGGGGCAGGCGTTTGCAT GATCGGCCCCCGGAACACGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MAALLCLPSAAIAQSDLSAELADTLAPVAEVESLGATLTCTALYRSLSLLFGSQSENFEDFQSREGAMASLSGVLWARSP DGAGQSPDDVFAVLLPLINAATDQYLAHMDALSLIDGTPFDDQLLGQIDYCNAIFDSLDTGAE
Sequences:
>Translated_143_residues MAALLCLPSAAIAQSDLSAELADTLAPVAEVESLGATLTCTALYRSLSLLFGSQSENFEDFQSREGAMASLSGVLWARSP DGAGQSPDDVFAVLLPLINAATDQYLAHMDALSLIDGTPFDDQLLGQIDYCNAIFDSLDTGAE >Mature_142_residues AALLCLPSAAIAQSDLSAELADTLAPVAEVESLGATLTCTALYRSLSLLFGSQSENFEDFQSREGAMASLSGVLWARSPD GAGQSPDDVFAVLLPLINAATDQYLAHMDALSLIDGTPFDDQLLGQIDYCNAIFDSLDTGAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14978; Mature: 14847
Theoretical pI: Translated: 3.41; Mature: 3.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAALLCLPSAAIAQSDLSAELADTLAPVAEVESLGATLTCTALYRSLSLLFGSQSENFED CCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHH FQSREGAMASLSGVLWARSPDGAGQSPDDVFAVLLPLINAATDQYLAHMDALSLIDGTPF HHHHCCHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DDQLLGQIDYCNAIFDSLDTGAE CHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure AALLCLPSAAIAQSDLSAELADTLAPVAEVESLGATLTCTALYRSLSLLFGSQSENFED CCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHH FQSREGAMASLSGVLWARSPDGAGQSPDDVFAVLLPLINAATDQYLAHMDALSLIDGTPF HHHHCCHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DDQLLGQIDYCNAIFDSLDTGAE CHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA