Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89055231

Identifier: 89055231

GI number: 89055231

Start: 2753084

End: 2753497

Strand: Direct

Name: 89055231

Synonym: Jann_2740

Alternate gene names: NA

Gene position: 2753084-2753497 (Clockwise)

Preceding gene: 89055230

Following gene: 89055232

Centisome position: 63.76

GC content: 64.98

Gene sequence:

>414_bases
ATGCGTCTTGCAATGACGTCTGCTGTGGCTTTGGCCGCAACACTACCCTTGTCACTCACGACACCCGCCACCGCTTCACC
GCTGAACTGGCCAGATTCAGGCGAGCCGATGGCGATGCATTGCGCCGCCGTTCTGCACGCCTATGGGCAGGCCTATGCGA
TGGCCGCAGACCTCAGCGGGCAAGAGGCGACGCCGGTGGGCGCTCTGCCGGCGGGTCTGTTGCAACAGGCGGGCGGCGAC
ACGCGATTGCCGGATATCACGTTGGCCGCGGAGGCCTACCTGACCCATGCGGAAAGCGTCGCGCGCACCAGTTTCTACCC
CGCTCTGATCGGTGACGGGACGCCGTATCTGGCCGACGATGGGCGGGAATTGGTCGTGGCGGTTCAGACCTGCGTGGCGC
AGTTCGGCCTTTAA

Upstream 100 bases:

>100_bases
TTATTCGTGATTTGGGTCCCCGCCTCGCCCCTGCTACGGTTCTCGCTGAGGGGCAGGCGTTTGCATGATCGGCCCCCGGA
ACACGTAAAAGGGGAACACC

Downstream 100 bases:

>100_bases
CGACGGGCTGGTATCAGGCTGGCGGCCGATGCCCTTGGGCAAATGACGCGGTGTGCGGACTGGACAGGTCCTTGGCGATT
GGCGATGACTACATCCATCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MRLAMTSAVALAATLPLSLTTPATASPLNWPDSGEPMAMHCAAVLHAYGQAYAMAADLSGQEATPVGALPAGLLQQAGGD
TRLPDITLAAEAYLTHAESVARTSFYPALIGDGTPYLADDGRELVVAVQTCVAQFGL

Sequences:

>Translated_137_residues
MRLAMTSAVALAATLPLSLTTPATASPLNWPDSGEPMAMHCAAVLHAYGQAYAMAADLSGQEATPVGALPAGLLQQAGGD
TRLPDITLAAEAYLTHAESVARTSFYPALIGDGTPYLADDGRELVVAVQTCVAQFGL
>Mature_137_residues
MRLAMTSAVALAATLPLSLTTPATASPLNWPDSGEPMAMHCAAVLHAYGQAYAMAADLSGQEATPVGALPAGLLQQAGGD
TRLPDITLAAEAYLTHAESVARTSFYPALIGDGTPYLADDGRELVVAVQTCVAQFGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14015; Mature: 14015

Theoretical pI: Translated: 4.16; Mature: 4.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLAMTSAVALAATLPLSLTTPATASPLNWPDSGEPMAMHCAAVLHAYGQAYAMAADLSG
CCCCHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEECCCC
QEATPVGALPAGLLQQAGGDTRLPDITLAAEAYLTHAESVARTSFYPALIGDGTPYLADD
CCCCCCCCCCHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCC
GRELVVAVQTCVAQFGL
CHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRLAMTSAVALAATLPLSLTTPATASPLNWPDSGEPMAMHCAAVLHAYGQAYAMAADLSG
CCCCHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEECCCC
QEATPVGALPAGLLQQAGGDTRLPDITLAAEAYLTHAESVARTSFYPALIGDGTPYLADD
CCCCCCCCCCHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCC
GRELVVAVQTCVAQFGL
CHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA