| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89055207
Identifier: 89055207
GI number: 89055207
Start: 2725630
End: 2725941
Strand: Direct
Name: 89055207
Synonym: Jann_2716
Alternate gene names: NA
Gene position: 2725630-2725941 (Clockwise)
Preceding gene: 89055206
Following gene: 89055208
Centisome position: 63.12
GC content: 58.01
Gene sequence:
>312_bases GTGCCTTCGAGAGAGGACACCGGCTGGTACACGATCACGTCACGGGGTGCACTTGGCGCGGGCGATCCAGCCTCGTGGCG CATGTGGGGTGAGGCCCACGTGCAGCACAAAGCCTGGGATCATTCGGGCCACATTCGGAAATGGCAAAGCTTCTGTCACC GACGCCATGCCTGTGGTCACTCGATCCAGGTCCCGCACTGGAGATCCGTCTGGATTGACGCATCGCCTGTGCAAAAGAAT GTCGCAACCGCCACCGGCATTAACCAATTGGGTCGCGTTTTCTTCAACGCCAATAAACACCAACTCTGTTAA
Upstream 100 bases:
>100_bases GCCGATGCGGTTCAGACAGGTGATTACACCATCCATTGGCTGGAACATTGGCTGGACGAAAACCTGTCTTAACGAAATTG GCGTAGGATGCGTCCAGCCG
Downstream 100 bases:
>100_bases TGCCGGGTTAAGGGCAGAGAGAAAAATCGAAACATCTACGTTTTGCCAAGTTATTATGGGCTTTTTTACGCAGAAGGCCT AGGTGTCATTTATGGCGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 103; Mature: 102
Protein sequence:
>103_residues MPSREDTGWYTITSRGALGAGDPASWRMWGEAHVQHKAWDHSGHIRKWQSFCHRRHACGHSIQVPHWRSVWIDASPVQKN VATATGINQLGRVFFNANKHQLC
Sequences:
>Translated_103_residues MPSREDTGWYTITSRGALGAGDPASWRMWGEAHVQHKAWDHSGHIRKWQSFCHRRHACGHSIQVPHWRSVWIDASPVQKN VATATGINQLGRVFFNANKHQLC >Mature_102_residues PSREDTGWYTITSRGALGAGDPASWRMWGEAHVQHKAWDHSGHIRKWQSFCHRRHACGHSIQVPHWRSVWIDASPVQKNV ATATGINQLGRVFFNANKHQLC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11753; Mature: 11622
Theoretical pI: Translated: 10.47; Mature: 10.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSREDTGWYTITSRGALGAGDPASWRMWGEAHVQHKAWDHSGHIRKWQSFCHRRHACGH CCCCCCCCEEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC SIQVPHWRSVWIDASPVQKNVATATGINQLGRVFFNANKHQLC CCCCCCCEEEEEECCCCCHHHHHHHCHHHHHHHHHCCCCCCCC >Mature Secondary Structure PSREDTGWYTITSRGALGAGDPASWRMWGEAHVQHKAWDHSGHIRKWQSFCHRRHACGH CCCCCCCEEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC SIQVPHWRSVWIDASPVQKNVATATGINQLGRVFFNANKHQLC CCCCCCCEEEEEECCCCCHHHHHHHCHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA