Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89055175

Identifier: 89055175

GI number: 89055175

Start: 2693703

End: 2695070

Strand: Direct

Name: 89055175

Synonym: Jann_2684

Alternate gene names: NA

Gene position: 2693703-2695070 (Clockwise)

Preceding gene: 89055174

Following gene: 89055176

Centisome position: 62.38

GC content: 67.18

Gene sequence:

>1368_bases
TTGTCCCGTTTCCTAACCCTCGCGGCCCCCGTTCTTGCCCTTGCCCTCGCGGCCTGTGCGCCCTCTTCCAGCACGGATGT
GCCGGCGCGGGCCTCCGCCGCCCTGCCCGGCGCATTGCCTGCGATGAACACGTTTGGCCGAACGCGCGTGGACGCCCCGT
CGCGGTCCAACACATCGATTGCCGCCGATTTCCTGGACCTCAGCTTCCAGATGGAATCGGGCCGCGTGATTGAACGGATG
AGCCGTTTTGAGGGGCCGATTACCGTGGCCGTCGCCTCCGGCGCGCCCGCCTCGCTCAACGCCGATCTGGATCTGCTGAT
CAGCCGTCTGCGCAATGAGGCCGACATCAACATCGCACGCGCCACCTCCGGCGCGGCGTCGATCACGATCGAGACGATGC
CCCGCGCACGTATGCAACGGGTGGTGCCGCAAGCCGCCTGTTTCGTGGTGCCGCGCGTCAGTTCCTGGACCGAGTTCCGG
CGCGCGCGATCAGGCCGGACGCTGGATTGGACAACGCTGGACACGCGCGAACGGGTGGCCGTCTTCATCCCGTCTGACGT
CTCCCCGCAAGAGGTGCGTGATTGCCTCCACGAAGAGATTGCGCAGGCCCTCGGGCCGCTGAACGACCTGTACCGCCTGT
CAGATTCGGTCTTCAACGACGATAACTTCAATGCGATCCTGACCGGTTTCGATATGGTCATCCTGCGCGCCTATTATGAC
GATGCGCTGCGATCTGGCATGACGCGGGGCCAGGTGGCCGCGGCCCTGCCCGGCATCCTGTCGCGGATCAACCCGCGTGG
CGGAAGTGCGTCTGGCGGGACCGGATCGCCCACACCGCGCCAATGGATCACCGAGATTGAGGCCGCCCTTGGGCCCGGAT
CGTCGGACGCGGATCGCATCATTGCCGCCGAACGCGCGGTCCGTCTGGCGCAACAACAGCGCTGGACCGACACACGCCTG
GCCTTCAGCTACTTCGCCCTGGGTCGCCTGACCCTGTCGCGCGATGTGGAAACCTCGATCCAGGCGTTCCAATCGGCCTC
CACCATCTTCGACCGCACCGCGCCCGGCGGCATCCAATCGGCCCATGTTGACATGCAACTGGCCGCCTTCGCCCTCTCCG
CTGGTCGTATGACCGAGGCGTTGCGCCTGACCGAACGGGCCCTGCCTGCGGCGACGCGGGCGCAGAACGCCTCCCTCCTG
TCTACCCTACTGATGATCCGTGCCGAGGCGCTGGATGACGCCGGCCGCGCGTCCGAGGCCCGCAGCGTCCGCCTTGATAG
CCTGGCGTGGGGCCGTTATGGCTTCGGCTCAAACGCGGCGGTGGGCGCGCGCCTGACAGAGGTCGCGGCACTCTCCCCCG
GACGGTAG

Upstream 100 bases:

>100_bases
GGATGACACAACGCGCCAATGCGACGGCGCGAACACTCTACGATCGGATCGGACAACCGACTGATTTCATGAAATATTCT
AGATCTTGAAGGAGGGGCAT

Downstream 100 bases:

>100_bases
TTGGGGCGAAGCAGATGCTGAATTTCATTGGCGCAGGCCTGGGCGTGATCGCAGGCGTGATCCTGGCCCGGATGCGGGGC
GGCAACCGCGCGGATATGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 455; Mature: 454

Protein sequence:

>455_residues
MSRFLTLAAPVLALALAACAPSSSTDVPARASAALPGALPAMNTFGRTRVDAPSRSNTSIAADFLDLSFQMESGRVIERM
SRFEGPITVAVASGAPASLNADLDLLISRLRNEADINIARATSGAASITIETMPRARMQRVVPQAACFVVPRVSSWTEFR
RARSGRTLDWTTLDTRERVAVFIPSDVSPQEVRDCLHEEIAQALGPLNDLYRLSDSVFNDDNFNAILTGFDMVILRAYYD
DALRSGMTRGQVAAALPGILSRINPRGGSASGGTGSPTPRQWITEIEAALGPGSSDADRIIAAERAVRLAQQQRWTDTRL
AFSYFALGRLTLSRDVETSIQAFQSASTIFDRTAPGGIQSAHVDMQLAAFALSAGRMTEALRLTERALPAATRAQNASLL
STLLMIRAEALDDAGRASEARSVRLDSLAWGRYGFGSNAAVGARLTEVAALSPGR

Sequences:

>Translated_455_residues
MSRFLTLAAPVLALALAACAPSSSTDVPARASAALPGALPAMNTFGRTRVDAPSRSNTSIAADFLDLSFQMESGRVIERM
SRFEGPITVAVASGAPASLNADLDLLISRLRNEADINIARATSGAASITIETMPRARMQRVVPQAACFVVPRVSSWTEFR
RARSGRTLDWTTLDTRERVAVFIPSDVSPQEVRDCLHEEIAQALGPLNDLYRLSDSVFNDDNFNAILTGFDMVILRAYYD
DALRSGMTRGQVAAALPGILSRINPRGGSASGGTGSPTPRQWITEIEAALGPGSSDADRIIAAERAVRLAQQQRWTDTRL
AFSYFALGRLTLSRDVETSIQAFQSASTIFDRTAPGGIQSAHVDMQLAAFALSAGRMTEALRLTERALPAATRAQNASLL
STLLMIRAEALDDAGRASEARSVRLDSLAWGRYGFGSNAAVGARLTEVAALSPGR
>Mature_454_residues
SRFLTLAAPVLALALAACAPSSSTDVPARASAALPGALPAMNTFGRTRVDAPSRSNTSIAADFLDLSFQMESGRVIERMS
RFEGPITVAVASGAPASLNADLDLLISRLRNEADINIARATSGAASITIETMPRARMQRVVPQAACFVVPRVSSWTEFRR
ARSGRTLDWTTLDTRERVAVFIPSDVSPQEVRDCLHEEIAQALGPLNDLYRLSDSVFNDDNFNAILTGFDMVILRAYYDD
ALRSGMTRGQVAAALPGILSRINPRGGSASGGTGSPTPRQWITEIEAALGPGSSDADRIIAAERAVRLAQQQRWTDTRLA
FSYFALGRLTLSRDVETSIQAFQSASTIFDRTAPGGIQSAHVDMQLAAFALSAGRMTEALRLTERALPAATRAQNASLLS
TLLMIRAEALDDAGRASEARSVRLDSLAWGRYGFGSNAAVGARLTEVAALSPGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48633; Mature: 48501

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRFLTLAAPVLALALAACAPSSSTDVPARASAALPGALPAMNTFGRTRVDAPSRSNTSI
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCHH
AADFLDLSFQMESGRVIERMSRFEGPITVAVASGAPASLNADLDLLISRLRNEADINIAR
HHHHHHHEEECCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCEEEE
ATSGAASITIETMPRARMQRVVPQAACFVVPRVSSWTEFRRARSGRTLDWTTLDTRERVA
ECCCCCEEEEECCCHHHHHHHHHHHHHEEECCCHHHHHHHHHHCCCCEEEEECCCCCCEE
VFIPSDVSPQEVRDCLHEEIAQALGPLNDLYRLSDSVFNDDNFNAILTGFDMVILRAYYD
EEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
DALRSGMTRGQVAAALPGILSRINPRGGSASGGTGSPTPRQWITEIEAALGPGSSDADRI
HHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHH
IAAERAVRLAQQQRWTDTRLAFSYFALGRLTLSRDVETSIQAFQSASTIFDRTAPGGIQS
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
AHVDMQLAAFALSAGRMTEALRLTERALPAATRAQNASLLSTLLMIRAEALDDAGRASEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
RSVRLDSLAWGRYGFGSNAAVGARLTEVAALSPGR
HHEEHHHEECCCCCCCCCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SRFLTLAAPVLALALAACAPSSSTDVPARASAALPGALPAMNTFGRTRVDAPSRSNTSI
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCHH
AADFLDLSFQMESGRVIERMSRFEGPITVAVASGAPASLNADLDLLISRLRNEADINIAR
HHHHHHHEEECCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCEEEE
ATSGAASITIETMPRARMQRVVPQAACFVVPRVSSWTEFRRARSGRTLDWTTLDTRERVA
ECCCCCEEEEECCCHHHHHHHHHHHHHEEECCCHHHHHHHHHHCCCCEEEEECCCCCCEE
VFIPSDVSPQEVRDCLHEEIAQALGPLNDLYRLSDSVFNDDNFNAILTGFDMVILRAYYD
EEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
DALRSGMTRGQVAAALPGILSRINPRGGSASGGTGSPTPRQWITEIEAALGPGSSDADRI
HHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHH
IAAERAVRLAQQQRWTDTRLAFSYFALGRLTLSRDVETSIQAFQSASTIFDRTAPGGIQS
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
AHVDMQLAAFALSAGRMTEALRLTERALPAATRAQNASLLSTLLMIRAEALDDAGRASEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
RSVRLDSLAWGRYGFGSNAAVGARLTEVAALSPGR
HHEEHHHEECCCCCCCCCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA