Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89055176

Identifier: 89055176

GI number: 89055176

Start: 2695263

End: 2696447

Strand: Direct

Name: 89055176

Synonym: Jann_2685

Alternate gene names: NA

Gene position: 2695263-2696447 (Clockwise)

Preceding gene: 89055175

Following gene: 89055178

Centisome position: 62.42

GC content: 61.35

Gene sequence:

>1185_bases
ATGTTCCTGCCCTTCTTCCAGACCCTCCGCATGGCCCGCATCCCGGTGTCCTTGCGGGAATATCTTGCGTTTTTGGACGG
CGTCTCGGCGGGTCTTGTGACCTACGACATCGACGGTTTCTACTACCTTGCGCGCACGGCGATGGTGAAGGATGAACGGC
ATCTTGACCGCTTCGACCAGGCCTTTGCCCATAGCTTTGGCGGGCTGGAGGCGATCAGCGCCGAGGACGTGCTGGAGGCC
ACGGAAATCCCCCGGGACTGGCTGGAAAAGCTCGCCGAAAAGCACCTGTCCGAGGAAGAACGCGCCGAGATTGAGGCCCT
TGGCGGCTTCGACAAGCTGATGGAAACCCTGCGCGAGCGGTTGAAGGAGCAGGAGAAGCGGCATCAGGGCGGGTCCAAAT
GGATCGGAACGGCGGGGACGTCCCCGTTCGGGGCCTATGGCTACAATCCCGAAGGCGTGCGGATCGGGCAACATGAATCT
AGGCATCGGCGCGCCGTAAAGGTCTGGGACAAAAGGGATTTCAAGAATCTTGACGGCGATGTGGAGCTGGGAACGCGCAA
CATCAAGGTGGCCCTGAAGCGCCTGCGCCAATGGGCAAGGGACGGCGCGGCGGAAGAGTTGGATCTGGACGGCACGATCC
GCGCGACGGCGGAACAGGGTTGGCTGGACGTCAAAACCCGGCCCGAGCGGCGCAATGCGGTCAAGGTGATCCTGTTCCTC
GACGTGGGCGGGTCCATGGACGATCATGTGAAAGTGGTCGAGGAGCTGTTCAGCGCCGCGAAGGCCGAGTTCAAGCACCT
GGAATACTATTATTTCCACAACTGCCTGTACGAGTCCGTCTGGCGCGACAACCGAAGACGCTGGACCGAGACGATCCCGA
CCTTCGAGGTCATGAACACCTACGGCCCTGATTACAAATGCATATTCGTGGGCGACGCGGCGATGTCACCCTATGAGGTC
GCGTTCGCGGGCGGCGCCAATGAACATTGGAACGAGGAGCCCGGCAGCACCTGGCTCCAACGCGCCCGCACCCAATGGCC
CGATCACATGTGGATCAACCCTACGCCTGAGCGGCACTGGCGCTACACGCAGTCGACCCAGATGATTTCCGAGATTTTCG
AGGGCCGCATGGTCCCGATGACGCTGGAAGGCCTTGACCGGGGGATGCGCGATCTGGGTCGATAA

Upstream 100 bases:

>100_bases
GATATGGCCCAATATGGCGCTGTCTTTGCGGTGATCGGCTTCCTGATCGGGACGCTCATCATGCTTGTGGTCCCTGCCCC
GCAGTAGCTAGACTGCGCCC

Downstream 100 bases:

>100_bases
GCCACAAAAAACCGCCGCACCCTTTGGGGCACGGCGGCTTCGATCTAAAGTTCAACTTCGGTCGTTAGGCTGTCTTCTGA
CGGCGGCGCATCACGCCGAA

Product: hypothetical protein

Products: NA

Alternate protein names: Cytoplasmic Protein; Von Willebrand Factor Type A(VWA) Domain Protein; VWA Containing CoxE-Like Family Protein

Number of amino acids: Translated: 394; Mature: 394

Protein sequence:

>394_residues
MFLPFFQTLRMARIPVSLREYLAFLDGVSAGLVTYDIDGFYYLARTAMVKDERHLDRFDQAFAHSFGGLEAISAEDVLEA
TEIPRDWLEKLAEKHLSEEERAEIEALGGFDKLMETLRERLKEQEKRHQGGSKWIGTAGTSPFGAYGYNPEGVRIGQHES
RHRRAVKVWDKRDFKNLDGDVELGTRNIKVALKRLRQWARDGAAEELDLDGTIRATAEQGWLDVKTRPERRNAVKVILFL
DVGGSMDDHVKVVEELFSAAKAEFKHLEYYYFHNCLYESVWRDNRRRWTETIPTFEVMNTYGPDYKCIFVGDAAMSPYEV
AFAGGANEHWNEEPGSTWLQRARTQWPDHMWINPTPERHWRYTQSTQMISEIFEGRMVPMTLEGLDRGMRDLGR

Sequences:

>Translated_394_residues
MFLPFFQTLRMARIPVSLREYLAFLDGVSAGLVTYDIDGFYYLARTAMVKDERHLDRFDQAFAHSFGGLEAISAEDVLEA
TEIPRDWLEKLAEKHLSEEERAEIEALGGFDKLMETLRERLKEQEKRHQGGSKWIGTAGTSPFGAYGYNPEGVRIGQHES
RHRRAVKVWDKRDFKNLDGDVELGTRNIKVALKRLRQWARDGAAEELDLDGTIRATAEQGWLDVKTRPERRNAVKVILFL
DVGGSMDDHVKVVEELFSAAKAEFKHLEYYYFHNCLYESVWRDNRRRWTETIPTFEVMNTYGPDYKCIFVGDAAMSPYEV
AFAGGANEHWNEEPGSTWLQRARTQWPDHMWINPTPERHWRYTQSTQMISEIFEGRMVPMTLEGLDRGMRDLGR
>Mature_394_residues
MFLPFFQTLRMARIPVSLREYLAFLDGVSAGLVTYDIDGFYYLARTAMVKDERHLDRFDQAFAHSFGGLEAISAEDVLEA
TEIPRDWLEKLAEKHLSEEERAEIEALGGFDKLMETLRERLKEQEKRHQGGSKWIGTAGTSPFGAYGYNPEGVRIGQHES
RHRRAVKVWDKRDFKNLDGDVELGTRNIKVALKRLRQWARDGAAEELDLDGTIRATAEQGWLDVKTRPERRNAVKVILFL
DVGGSMDDHVKVVEELFSAAKAEFKHLEYYYFHNCLYESVWRDNRRRWTETIPTFEVMNTYGPDYKCIFVGDAAMSPYEV
AFAGGANEHWNEEPGSTWLQRARTQWPDHMWINPTPERHWRYTQSTQMISEIFEGRMVPMTLEGLDRGMRDLGR

Specific function: Unknown

COG id: COG3825

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45713; Mature: 45713

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLPFFQTLRMARIPVSLREYLAFLDGVSAGLVTYDIDGFYYLARTAMVKDERHLDRFDQ
CCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHH
AFAHSFGGLEAISAEDVLEATEIPRDWLEKLAEKHLSEEERAEIEALGGFDKLMETLRER
HHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHH
LKEQEKRHQGGSKWIGTAGTSPFGAYGYNPEGVRIGQHESRHRRAVKVWDKRDFKNLDGD
HHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHCCCCCCCCCCC
VELGTRNIKVALKRLRQWARDGAAEELDLDGTIRATAEQGWLDVKTRPERRNAVKVILFL
EEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCEECCCCCCCCCEEEEEEEE
DVGGSMDDHVKVVEELFSAAKAEFKHLEYYYFHNCLYESVWRDNRRRWTETIPTFEVMNT
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHC
YGPDYKCIFVGDAAMSPYEVAFAGGANEHWNEEPGSTWLQRARTQWPDHMWINPTPERHW
CCCCEEEEEEECCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHC
RYTQSTQMISEIFEGRMVPMTLEGLDRGMRDLGR
CHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHCC
>Mature Secondary Structure
MFLPFFQTLRMARIPVSLREYLAFLDGVSAGLVTYDIDGFYYLARTAMVKDERHLDRFDQ
CCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHH
AFAHSFGGLEAISAEDVLEATEIPRDWLEKLAEKHLSEEERAEIEALGGFDKLMETLRER
HHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHH
LKEQEKRHQGGSKWIGTAGTSPFGAYGYNPEGVRIGQHESRHRRAVKVWDKRDFKNLDGD
HHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHCCCCCCCCCCC
VELGTRNIKVALKRLRQWARDGAAEELDLDGTIRATAEQGWLDVKTRPERRNAVKVILFL
EEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCEECCCCCCCCCEEEEEEEE
DVGGSMDDHVKVVEELFSAAKAEFKHLEYYYFHNCLYESVWRDNRRRWTETIPTFEVMNT
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHC
YGPDYKCIFVGDAAMSPYEVAFAGGANEHWNEEPGSTWLQRARTQWPDHMWINPTPERHW
CCCCEEEEEEECCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHC
RYTQSTQMISEIFEGRMVPMTLEGLDRGMRDLGR
CHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA