Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89055164

Identifier: 89055164

GI number: 89055164

Start: 2684020

End: 2684652

Strand: Reverse

Name: 89055164

Synonym: Jann_2673

Alternate gene names: NA

Gene position: 2684652-2684020 (Counterclockwise)

Preceding gene: 89055171

Following gene: 89055160

Centisome position: 62.17

GC content: 63.19

Gene sequence:

>633_bases
ATGAGAGTTTTAAGAGGTATTGCCGCGGGTATCGTCGCTTTGGGTTTGGCGGCGGGGGCCGCAAACGCCAACACAGTCTC
GATTGATTTTGAAGACTTCAGTGGGTTCTACGCGCCGACATTCGACTTTGGCGGGGTCAGTTTCCAGTCGGTGGACCCGA
ACCAATCCATGCAGGTCGGACGCGTTGGCGCACTGGGGGCCGGGCAATCCGGACATGTCCTGCGCTCCGCCGTGCCGCCC
TTCGGGGCCGAGCCGCGCGGTGGATCGTTCGGCGGCACATTCCTCGGGACGACCGTGTCATTCCTGAGCCTCGTGGCAGG
GGACAGCGGTGGTGACCTCGATATCTTCAACCTGCAGGGCTTTGACGCGAATGGCAGCCTCGTGAGTGAGACCGGAGAGC
TGCGCAGCAATGCCGCGACCCTTCTGTCTATCCAGGGTGCCGGCATTGCAAGTTTTCTACTGACGATCGGCGACCTTCCA
GACAACGATGGCTCCAGCGTGGTCGACAACTTTACGTTCACGCAGGAGGTGGCCGCTGTGCCTTTGCCCGCGTCCCTGCC
GCTTCTGGGTGTCGGCGCATTGGCATTGGGGGTCGTGGCGCGTCGCCGCCGCCACCGGGCCGCACAGGCCTGA

Upstream 100 bases:

>100_bases
AAATCTTCGAAAATTTGAAACTTATTGGCGCCACGGCACGTGATTTACTCTGAAGCCGCATGTTTAGAGCTTCGACGCAG
TCAGCAATCAGGGGACCAGA

Downstream 100 bases:

>100_bases
CCGCAGGCCGCAGCTTGATACGACAGCCCGGTTCATGCCGGGCTGTGTGTTGACTGGACGGCACTCTAGCGGTCCATGAC
CTCTAGCCCGTAGAACACCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MRVLRGIAAGIVALGLAAGAANANTVSIDFEDFSGFYAPTFDFGGVSFQSVDPNQSMQVGRVGALGAGQSGHVLRSAVPP
FGAEPRGGSFGGTFLGTTVSFLSLVAGDSGGDLDIFNLQGFDANGSLVSETGELRSNAATLLSIQGAGIASFLLTIGDLP
DNDGSSVVDNFTFTQEVAAVPLPASLPLLGVGALALGVVARRRRHRAAQA

Sequences:

>Translated_210_residues
MRVLRGIAAGIVALGLAAGAANANTVSIDFEDFSGFYAPTFDFGGVSFQSVDPNQSMQVGRVGALGAGQSGHVLRSAVPP
FGAEPRGGSFGGTFLGTTVSFLSLVAGDSGGDLDIFNLQGFDANGSLVSETGELRSNAATLLSIQGAGIASFLLTIGDLP
DNDGSSVVDNFTFTQEVAAVPLPASLPLLGVGALALGVVARRRRHRAAQA
>Mature_210_residues
MRVLRGIAAGIVALGLAAGAANANTVSIDFEDFSGFYAPTFDFGGVSFQSVDPNQSMQVGRVGALGAGQSGHVLRSAVPP
FGAEPRGGSFGGTFLGTTVSFLSLVAGDSGGDLDIFNLQGFDANGSLVSETGELRSNAATLLSIQGAGIASFLLTIGDLP
DNDGSSVVDNFTFTQEVAAVPLPASLPLLGVGALALGVVARRRRHRAAQA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21185; Mature: 21185

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVLRGIAAGIVALGLAAGAANANTVSIDFEDFSGFYAPTFDFGGVSFQSVDPNQSMQVG
CHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHCCCCCCCCCCCCCEEEECCCCCCCEECC
RVGALGAGQSGHVLRSAVPPFGAEPRGGSFGGTFLGTTVSFLSLVAGDSGGDLDIFNLQG
CEEECCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECC
FDANGSLVSETGELRSNAATLLSIQGAGIASFLLTIGDLPDNDGSSVVDNFTFTQEVAAV
CCCCCCEECCCHHHHCCCEEEEEECCCCHHHHHHHHCCCCCCCCCHHHHCCCHHHHHHCC
PLPASLPLLGVGALALGVVARRRRHRAAQA
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRVLRGIAAGIVALGLAAGAANANTVSIDFEDFSGFYAPTFDFGGVSFQSVDPNQSMQVG
CHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHCCCCCCCCCCCCCEEEECCCCCCCEECC
RVGALGAGQSGHVLRSAVPPFGAEPRGGSFGGTFLGTTVSFLSLVAGDSGGDLDIFNLQG
CEEECCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECC
FDANGSLVSETGELRSNAATLLSIQGAGIASFLLTIGDLPDNDGSSVVDNFTFTQEVAAV
CCCCCCEECCCHHHHCCCEEEEEECCCCHHHHHHHHCCCCCCCCCHHHHCCCHHHHHHCC
PLPASLPLLGVGALALGVVARRRRHRAAQA
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA