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The map label for this gene is puuD [H]

Identifier: 89055160

GI number: 89055160

Start: 2679938

End: 2680804

Strand: Reverse

Name: puuD [H]

Synonym: Jann_2669

Alternate gene names: 89055160

Gene position: 2680804-2679938 (Counterclockwise)

Preceding gene: 89055164

Following gene: 89055159

Centisome position: 62.08

GC content: 62.4

Gene sequence:

>867_bases
ATGCGCGGCCCTTTGCGCGGCAAAGTCTCTTTTCCTTGGGGGCTGCGACCGCTACCTATGCTGGTGTATCACGAATTTGG
ACGCAGTATGACCCGCCCCGTCATTGGCATTATTGGCAATCACCACCTGATCAACGATCAATATGCAACCCATGCCGGCG
GCATCATGAATTCGGAGGCCGTGGCCGAGGTATCCGGCGGGTTGCCGCTGATTGTGCCCTCAAATCCCGCATTCGTGGAC
CTTGATGATCTGATGGCGACCTGTGCGGGCTTCGTCTTTACCGGTGGGCGGCCCAATGTGCACCCCGAGGAATATGGCGA
GGATTATACCGACGCCCACGGCACCATGGACCGGGACCGCGACGCGCTGACCTTGCCGCTGATCCGCGCCTGTGTGGAGC
GGGGGCAGCCGATCCTTGGCCTGTGTCGCGGGTTTCAGGAGGTCAACGTGGCGATGGGCGGATCTCTCTACCCCGAAATC
CGGGACCTGCCCGGTCGCATGAACCACCGTATGCCGCCCGACGGCACGATCGAGGAGAAGTTTGAGCTTCGCCACACCGT
CACCTTCACTGAAGGTGGGCCGTTTCATCGGCTGATGGGGGCGCAACAGGTGCGCACCAATACGCTTCACGGTCAGGGCA
TCAAACAGGCCGGGGCGCGGGTGATCATTGATGGCCATGCAGAAGACGGCACGCCGGAGGCGATCTACATCGCCGATGCG
CCCGGGTTCACGCTGTCTGTTCAATGGCATCCTGAGTATCGCGCGGCGGAGGATCCGGTGTCTCGTCCGCTGTTTGCCGC
CTTTGGGGAGGCCGCGCGCGCCTGGTCTATAGGCAAACGCCCCGTGAAGGCAGGCGAGGTCGCCTGA

Upstream 100 bases:

>100_bases
GCGCGCATGCGGGCCAATTGGTCAGCAGGGTTTTCCAGGAAGGCAGGATCGTTCAGCTTATAGACCATGAAACGTGCCCA
TTTTCTCAACATGTGCGCAG

Downstream 100 bases:

>100_bases
ATCGGGCAATGCTGCGGCCTGCGCTCTCGCCGCACCGGGCTTCGCCAATGCCGCAGCCATCGCTTCAGTTTTCCTTGCCG
AAGGGCGTCTCTGTCGGCAT

Product: peptidase C26

Products: NA

Alternate protein names: Gamma-Glu-GABA hydrolase [H]

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MRGPLRGKVSFPWGLRPLPMLVYHEFGRSMTRPVIGIIGNHHLINDQYATHAGGIMNSEAVAEVSGGLPLIVPSNPAFVD
LDDLMATCAGFVFTGGRPNVHPEEYGEDYTDAHGTMDRDRDALTLPLIRACVERGQPILGLCRGFQEVNVAMGGSLYPEI
RDLPGRMNHRMPPDGTIEEKFELRHTVTFTEGGPFHRLMGAQQVRTNTLHGQGIKQAGARVIIDGHAEDGTPEAIYIADA
PGFTLSVQWHPEYRAAEDPVSRPLFAAFGEAARAWSIGKRPVKAGEVA

Sequences:

>Translated_288_residues
MRGPLRGKVSFPWGLRPLPMLVYHEFGRSMTRPVIGIIGNHHLINDQYATHAGGIMNSEAVAEVSGGLPLIVPSNPAFVD
LDDLMATCAGFVFTGGRPNVHPEEYGEDYTDAHGTMDRDRDALTLPLIRACVERGQPILGLCRGFQEVNVAMGGSLYPEI
RDLPGRMNHRMPPDGTIEEKFELRHTVTFTEGGPFHRLMGAQQVRTNTLHGQGIKQAGARVIIDGHAEDGTPEAIYIADA
PGFTLSVQWHPEYRAAEDPVSRPLFAAFGEAARAWSIGKRPVKAGEVA
>Mature_288_residues
MRGPLRGKVSFPWGLRPLPMLVYHEFGRSMTRPVIGIIGNHHLINDQYATHAGGIMNSEAVAEVSGGLPLIVPSNPAFVD
LDDLMATCAGFVFTGGRPNVHPEEYGEDYTDAHGTMDRDRDALTLPLIRACVERGQPILGLCRGFQEVNVAMGGSLYPEI
RDLPGRMNHRMPPDGTIEEKFELRHTVTFTEGGPFHRLMGAQQVRTNTLHGQGIKQAGARVIIDGHAEDGTPEAIYIADA
PGFTLSVQWHPEYRAAEDPVSRPLFAAFGEAARAWSIGKRPVKAGEVA

Specific function: Involved in the breakdown of putrescine via hydrolysis of the gamma-glutamyl linkage of gamma-glutamyl-gamma- aminobutyrate [H]

COG id: COG2071

COG function: function code R; Predicted glutamine amidotransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081871, Length=252, Percent_Identity=34.1269841269841, Blast_Score=136, Evalue=2e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017926
- InterPro:   IPR011697 [H]

Pfam domain/function: PF07722 Peptidase_C26 [H]

EC number: =3.5.1.94 [H]

Molecular weight: Translated: 31410; Mature: 31410

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGPLRGKVSFPWGLRPLPMLVYHEFGRSMTRPVIGIIGNHHLINDQYATHAGGIMNSEA
CCCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCEEECCCCEEECCCHHHHCCCCCCCHH
VAEVSGGLPLIVPSNPAFVDLDDLMATCAGFVFTGGRPNVHPEEYGEDYTDAHGTMDRDR
HHHHCCCCEEEECCCCCEEEHHHHHHHHHHHEEECCCCCCCHHHHCCCCCCCCCCCCCCC
DALTLPLIRACVERGQPILGLCRGFQEVNVAMGGSLYPEIRDLPGRMNHRMPPDGTIEEK
CCCHHHHHHHHHHCCCCHHHHHCCHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCHHHH
FELRHTVTFTEGGPFHRLMGAQQVRTNTLHGQGIKQAGARVIIDGHAEDGTPEAIYIADA
EEEEEEEEECCCCCHHHHHCHHHHHHHCCCCCCHHHCCCEEEEECCCCCCCCCEEEEECC
PGFTLSVQWHPEYRAAEDPVSRPLFAAFGEAARAWSIGKRPVKAGEVA
CCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MRGPLRGKVSFPWGLRPLPMLVYHEFGRSMTRPVIGIIGNHHLINDQYATHAGGIMNSEA
CCCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCEEECCCCEEECCCHHHHCCCCCCCHH
VAEVSGGLPLIVPSNPAFVDLDDLMATCAGFVFTGGRPNVHPEEYGEDYTDAHGTMDRDR
HHHHCCCCEEEECCCCCEEEHHHHHHHHHHHEEECCCCCCCHHHHCCCCCCCCCCCCCCC
DALTLPLIRACVERGQPILGLCRGFQEVNVAMGGSLYPEIRDLPGRMNHRMPPDGTIEEK
CCCHHHHHHHHHHCCCCHHHHHCCHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCHHHH
FELRHTVTFTEGGPFHRLMGAQQVRTNTLHGQGIKQAGARVIIDGHAEDGTPEAIYIADA
EEEEEEEEECCCCCHHHHHCHHHHHHHCCCCCCHHHCCCEEEEECCCCCCCCCEEEEECC
PGFTLSVQWHPEYRAAEDPVSRPLFAAFGEAARAWSIGKRPVKAGEVA
CCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]