Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89055119

Identifier: 89055119

GI number: 89055119

Start: 2645205

End: 2645693

Strand: Reverse

Name: 89055119

Synonym: Jann_2628

Alternate gene names: NA

Gene position: 2645693-2645205 (Counterclockwise)

Preceding gene: 89055120

Following gene: 89055118

Centisome position: 61.27

GC content: 58.28

Gene sequence:

>489_bases
ATGCAGATCGCAAAATCTATCCATGTAGACGCGCCGGTCGAAACGGTCTGGCGCATTCTGGCCGAGGAATACGCGGATGT
TGGGCAATGGGCCCGTGCCGTGCAGTCGTCTGCCCCCAATCCCGATGCGGCGCCCCTAACCGGGGCGTCCGTCGGAGGGC
GGGTCTGCACAGCATCCATCGGAGAGGTCGCGGAGACGATCCGGGAATATGATGCGGCAAATTATCAACTCGCTTATGAA
GCGCACTCCAAGTCCATGCCATTCTTCGTTCGCGGCCTCCATCGGCGTTGGAAGTTGAACCCATTGGGAGGCACCACCGA
AGTCGATCTGGCCTTCGAAGCCGATCTGATGGCCCCGTTCGGTTTCCTGATGGGATGGATGATGCGCCGTCAGTTTGAAA
CAGCGATCAATGACACGCTGGCCGATCTCAAACTCTATGCTGAAACGGGCAAAATTCACCCTGACAAGGCCAAGGCGCTG
GCAGCATGA

Upstream 100 bases:

>100_bases
CATGGCCCGAGTTCGGTGCATTGCCGGGCGTCGCCAACCTTGAGACGCTCCAGATGCAGCAGCTTGATATTGCGACGTCG
GTCAACCTTGAGGTCAACTG

Downstream 100 bases:

>100_bases
TCGATTTCCAAAAGCTTCAAAGAGACAACCTGGGAAAGGCGCACGTGAAGTTTCGCGAAGCCGGTTTGCAGGGCGGACCC
ATTGCGCTCCTGTTGCACGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MQIAKSIHVDAPVETVWRILAEEYADVGQWARAVQSSAPNPDAAPLTGASVGGRVCTASIGEVAETIREYDAANYQLAYE
AHSKSMPFFVRGLHRRWKLNPLGGTTEVDLAFEADLMAPFGFLMGWMMRRQFETAINDTLADLKLYAETGKIHPDKAKAL
AA

Sequences:

>Translated_162_residues
MQIAKSIHVDAPVETVWRILAEEYADVGQWARAVQSSAPNPDAAPLTGASVGGRVCTASIGEVAETIREYDAANYQLAYE
AHSKSMPFFVRGLHRRWKLNPLGGTTEVDLAFEADLMAPFGFLMGWMMRRQFETAINDTLADLKLYAETGKIHPDKAKAL
AA
>Mature_162_residues
MQIAKSIHVDAPVETVWRILAEEYADVGQWARAVQSSAPNPDAAPLTGASVGGRVCTASIGEVAETIREYDAANYQLAYE
AHSKSMPFFVRGLHRRWKLNPLGGTTEVDLAFEADLMAPFGFLMGWMMRRQFETAINDTLADLKLYAETGKIHPDKAKAL
AA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17783; Mature: 17783

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIAKSIHVDAPVETVWRILAEEYADVGQWARAVQSSAPNPDAAPLTGASVGGRVCTASI
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHH
GEVAETIREYDAANYQLAYEAHSKSMPFFVRGLHRRWKLNPLGGTTEVDLAFEADLMAPF
HHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCEEEEEEECCHHHHHH
GFLMGWMMRRQFETAINDTLADLKLYAETGKIHPDKAKALAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCC
>Mature Secondary Structure
MQIAKSIHVDAPVETVWRILAEEYADVGQWARAVQSSAPNPDAAPLTGASVGGRVCTASI
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHH
GEVAETIREYDAANYQLAYEAHSKSMPFFVRGLHRRWKLNPLGGTTEVDLAFEADLMAPF
HHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCEEEEEEECCHHHHHH
GFLMGWMMRRQFETAINDTLADLKLYAETGKIHPDKAKALAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA