| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89055119
Identifier: 89055119
GI number: 89055119
Start: 2645205
End: 2645693
Strand: Reverse
Name: 89055119
Synonym: Jann_2628
Alternate gene names: NA
Gene position: 2645693-2645205 (Counterclockwise)
Preceding gene: 89055120
Following gene: 89055118
Centisome position: 61.27
GC content: 58.28
Gene sequence:
>489_bases ATGCAGATCGCAAAATCTATCCATGTAGACGCGCCGGTCGAAACGGTCTGGCGCATTCTGGCCGAGGAATACGCGGATGT TGGGCAATGGGCCCGTGCCGTGCAGTCGTCTGCCCCCAATCCCGATGCGGCGCCCCTAACCGGGGCGTCCGTCGGAGGGC GGGTCTGCACAGCATCCATCGGAGAGGTCGCGGAGACGATCCGGGAATATGATGCGGCAAATTATCAACTCGCTTATGAA GCGCACTCCAAGTCCATGCCATTCTTCGTTCGCGGCCTCCATCGGCGTTGGAAGTTGAACCCATTGGGAGGCACCACCGA AGTCGATCTGGCCTTCGAAGCCGATCTGATGGCCCCGTTCGGTTTCCTGATGGGATGGATGATGCGCCGTCAGTTTGAAA CAGCGATCAATGACACGCTGGCCGATCTCAAACTCTATGCTGAAACGGGCAAAATTCACCCTGACAAGGCCAAGGCGCTG GCAGCATGA
Upstream 100 bases:
>100_bases CATGGCCCGAGTTCGGTGCATTGCCGGGCGTCGCCAACCTTGAGACGCTCCAGATGCAGCAGCTTGATATTGCGACGTCG GTCAACCTTGAGGTCAACTG
Downstream 100 bases:
>100_bases TCGATTTCCAAAAGCTTCAAAGAGACAACCTGGGAAAGGCGCACGTGAAGTTTCGCGAAGCCGGTTTGCAGGGCGGACCC ATTGCGCTCCTGTTGCACGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MQIAKSIHVDAPVETVWRILAEEYADVGQWARAVQSSAPNPDAAPLTGASVGGRVCTASIGEVAETIREYDAANYQLAYE AHSKSMPFFVRGLHRRWKLNPLGGTTEVDLAFEADLMAPFGFLMGWMMRRQFETAINDTLADLKLYAETGKIHPDKAKAL AA
Sequences:
>Translated_162_residues MQIAKSIHVDAPVETVWRILAEEYADVGQWARAVQSSAPNPDAAPLTGASVGGRVCTASIGEVAETIREYDAANYQLAYE AHSKSMPFFVRGLHRRWKLNPLGGTTEVDLAFEADLMAPFGFLMGWMMRRQFETAINDTLADLKLYAETGKIHPDKAKAL AA >Mature_162_residues MQIAKSIHVDAPVETVWRILAEEYADVGQWARAVQSSAPNPDAAPLTGASVGGRVCTASIGEVAETIREYDAANYQLAYE AHSKSMPFFVRGLHRRWKLNPLGGTTEVDLAFEADLMAPFGFLMGWMMRRQFETAINDTLADLKLYAETGKIHPDKAKAL AA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17783; Mature: 17783
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQIAKSIHVDAPVETVWRILAEEYADVGQWARAVQSSAPNPDAAPLTGASVGGRVCTASI CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHH GEVAETIREYDAANYQLAYEAHSKSMPFFVRGLHRRWKLNPLGGTTEVDLAFEADLMAPF HHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCEEEEEEECCHHHHHH GFLMGWMMRRQFETAINDTLADLKLYAETGKIHPDKAKALAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCC >Mature Secondary Structure MQIAKSIHVDAPVETVWRILAEEYADVGQWARAVQSSAPNPDAAPLTGASVGGRVCTASI CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHH GEVAETIREYDAANYQLAYEAHSKSMPFFVRGLHRRWKLNPLGGTTEVDLAFEADLMAPF HHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCEEEEEEECCHHHHHH GFLMGWMMRRQFETAINDTLADLKLYAETGKIHPDKAKALAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA