Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89055120

Identifier: 89055120

GI number: 89055120

Start: 2645693

End: 2646073

Strand: Reverse

Name: 89055120

Synonym: Jann_2629

Alternate gene names: NA

Gene position: 2646073-2645693 (Counterclockwise)

Preceding gene: 89055121

Following gene: 89055119

Centisome position: 61.28

GC content: 59.06

Gene sequence:

>381_bases
ATGAGACTTCGTACACTAGCCACCGTTGCCGCTTTGGCGCTCACGCCGTTCGCAGCCTTCGCCCAAGAAGCCACGGTGAT
GGAAATCGTCACATTCCAAGCTCAGGAAGGTGCAGACGCTGCAGCCGTAACCGCAGCACTCGACCCAATTTCCGCGCAGA
TGGGCCAGTACGGCACCCTTGTTGCGCGTTCGGTTGCCGAAGGCCCGAACGGGGCTTGGACGATGGTTAATTTCTGGACC
GACCGCGATGCGATGAACCGCATCAACGAAGAAGCCCTGACATGGCCCGAGTTCGGTGCATTGCCGGGCGTCGCCAACCT
TGAGACGCTCCAGATGCAGCAGCTTGATATTGCGACGTCGGTCAACCTTGAGGTCAACTGA

Upstream 100 bases:

>100_bases
CCGTGTCCGTGTTTGGCGGTGAATACCTCGGGGACGAGCGGCCCTAGGGCGTCCGCTGCACCCAAACTCACTCCACACCA
ACTCAACCAAGGAGACCTCC

Downstream 100 bases:

>100_bases
TGCAGATCGCAAAATCTATCCATGTAGACGCGCCGGTCGAAACGGTCTGGCGCATTCTGGCCGAGGAATACGCGGATGTT
GGGCAATGGGCCCGTGCCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MRLRTLATVAALALTPFAAFAQEATVMEIVTFQAQEGADAAAVTAALDPISAQMGQYGTLVARSVAEGPNGAWTMVNFWT
DRDAMNRINEEALTWPEFGALPGVANLETLQMQQLDIATSVNLEVN

Sequences:

>Translated_126_residues
MRLRTLATVAALALTPFAAFAQEATVMEIVTFQAQEGADAAAVTAALDPISAQMGQYGTLVARSVAEGPNGAWTMVNFWT
DRDAMNRINEEALTWPEFGALPGVANLETLQMQQLDIATSVNLEVN
>Mature_126_residues
MRLRTLATVAALALTPFAAFAQEATVMEIVTFQAQEGADAAAVTAALDPISAQMGQYGTLVARSVAEGPNGAWTMVNFWT
DRDAMNRINEEALTWPEFGALPGVANLETLQMQQLDIATSVNLEVN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13472; Mature: 13472

Theoretical pI: Translated: 3.82; Mature: 3.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLRTLATVAALALTPFAAFAQEATVMEIVTFQAQEGADAAAVTAALDPISAQMGQYGTL
CCCHHHHHHHHHHHHHHHHHHHCCHHHHHEEECCCCCCCHHHHHHHHCHHHHHHCCHHHH
VARSVAEGPNGAWTMVNFWTDRDAMNRINEEALTWPEFGALPGVANLETLQMQQLDIATS
HHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCEEEE
VNLEVN
EEEEEC
>Mature Secondary Structure
MRLRTLATVAALALTPFAAFAQEATVMEIVTFQAQEGADAAAVTAALDPISAQMGQYGTL
CCCHHHHHHHHHHHHHHHHHHHCCHHHHHEEECCCCCCCHHHHHHHHCHHHHHHCCHHHH
VARSVAEGPNGAWTMVNFWTDRDAMNRINEEALTWPEFGALPGVANLETLQMQQLDIATS
HHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCEEEE
VNLEVN
EEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA