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The map label for this gene is ulaR [H]

Identifier: 89055084

GI number: 89055084

Start: 2605871

End: 2606707

Strand: Direct

Name: ulaR [H]

Synonym: Jann_2593

Alternate gene names: 89055084

Gene position: 2605871-2606707 (Clockwise)

Preceding gene: 89055081

Following gene: 89055085

Centisome position: 60.35

GC content: 62.01

Gene sequence:

>837_bases
ATGCACGCCACGATTGAGTGGACTGGGGAGGATTCGATGCACGAAAAAGAACGCCACAACGTGATCCTGAGCGCTGTGCA
AGAGCGCTCAGTCGTCACTGTGGCTGATTTTTGTGCCCTGACCGGCGCGTCGGAAGCAACCGTGCGGCGCGACATCAACA
CCCTGCACACGCAAGACAAGCTGCGCCGGGTGCGCGGCGGGGCGGAGGCGATCACACCCCCCCAGTTCGTCGGTCTGGCA
GGCCGCACGTTTGCGGTGAATGAGGCCATGCGCGGGCCTGAGAAACAGGCCATCGCCCGTGCGGCGGTGGAGCTGTGCGA
CGACGGCGATGCAATCATCATCAACGGCGGCACCACGACGTTTCAGATGGTTCATCCGCTGGCCATGCGCCGGATGCAGA
TTTTCACCAACTCCTTCCCCATCGCGGAACACCTGCTGAAGCATTCCAAGAACACCATCATGCTGTCGGGCGGGGTGATC
TACCGCGAGCAGAACATCATCCTGTCGCCTTTCGACAACGACGTGACCCGCAATTTTGCCGCGACCCGAATGTTCATGGG
CGCCCAGGGCCTCGGCCCACTGGGCCTGATGGAGGCTGATCCGATGCTGATCCAGGCCGAACAAAAGCTGATCGGTCAGG
CCGATGAGTTGGTGGTGCTGGTCGACAGCTCAAAATTCGAAAACCGCTCCAGCCTCGTGCTGTGCCCGCTGACCCGCATC
GACGTGGTGATCACGGATGACGGCATCAGCGACCGCGCGGCGGCGATGCTGGAGGCGGCAGACATCAAACTGGTTGTGGC
GCAAACAAGTGCCGCGGCGGACACAGGTTCGGGCTGA

Upstream 100 bases:

>100_bases
CGGAGGCGTGGGGTCAAAGTCAATCACAAACCGTCACAATCTGTCGCGCTGCGCCACAGAATGACCGATAATGACATTTA
CTGATTGACAGGGGCTGATA

Downstream 100 bases:

>100_bases
GACCGGGCCACAAAAGACTCATTATCTGGGAGGAATTGACATGAGTATCACAAGACGGATTTTCGGCGGCACGGCGCTCG
CCGCGATGATGATGGCAGGC

Product: DeoR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MHATIEWTGEDSMHEKERHNVILSAVQERSVVTVADFCALTGASEATVRRDINTLHTQDKLRRVRGGAEAITPPQFVGLA
GRTFAVNEAMRGPEKQAIARAAVELCDDGDAIIINGGTTTFQMVHPLAMRRMQIFTNSFPIAEHLLKHSKNTIMLSGGVI
YREQNIILSPFDNDVTRNFAATRMFMGAQGLGPLGLMEADPMLIQAEQKLIGQADELVVLVDSSKFENRSSLVLCPLTRI
DVVITDDGISDRAAAMLEAADIKLVVAQTSAAADTGSG

Sequences:

>Translated_278_residues
MHATIEWTGEDSMHEKERHNVILSAVQERSVVTVADFCALTGASEATVRRDINTLHTQDKLRRVRGGAEAITPPQFVGLA
GRTFAVNEAMRGPEKQAIARAAVELCDDGDAIIINGGTTTFQMVHPLAMRRMQIFTNSFPIAEHLLKHSKNTIMLSGGVI
YREQNIILSPFDNDVTRNFAATRMFMGAQGLGPLGLMEADPMLIQAEQKLIGQADELVVLVDSSKFENRSSLVLCPLTRI
DVVITDDGISDRAAAMLEAADIKLVVAQTSAAADTGSG
>Mature_278_residues
MHATIEWTGEDSMHEKERHNVILSAVQERSVVTVADFCALTGASEATVRRDINTLHTQDKLRRVRGGAEAITPPQFVGLA
GRTFAVNEAMRGPEKQAIARAAVELCDDGDAIIINGGTTTFQMVHPLAMRRMQIFTNSFPIAEHLLKHSKNTIMLSGGVI
YREQNIILSPFDNDVTRNFAATRMFMGAQGLGPLGLMEADPMLIQAEQKLIGQADELVVLVDSSKFENRSSLVLCPLTRI
DVVITDDGISDRAAAMLEAADIKLVVAQTSAAADTGSG

Specific function: Represses ulaG and the ulaABCDEF operon [H]

COG id: COG1349

COG function: function code KG; Transcriptional regulators of sugar metabolism

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH deoR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790635, Length=255, Percent_Identity=33.7254901960784, Blast_Score=143, Evalue=1e-35,
Organism=Escherichia coli, GI226510968, Length=253, Percent_Identity=27.6679841897233, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1789059, Length=265, Percent_Identity=26.7924528301887, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1789519, Length=256, Percent_Identity=28.515625, Blast_Score=89, Evalue=4e-19,
Organism=Escherichia coli, GI1787540, Length=252, Percent_Identity=28.5714285714286, Blast_Score=88, Evalue=7e-19,
Organism=Escherichia coli, GI1789829, Length=236, Percent_Identity=26.6949152542373, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1788069, Length=257, Percent_Identity=26.0700389105058, Blast_Score=78, Evalue=6e-16,
Organism=Escherichia coli, GI87082344, Length=256, Percent_Identity=24.21875, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1789170, Length=232, Percent_Identity=25, Blast_Score=74, Evalue=7e-15,
Organism=Escherichia coli, GI1790753, Length=238, Percent_Identity=23.5294117647059, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014036
- InterPro:   IPR001034
- InterPro:   IPR018356
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00455 DeoR; PF08220 HTH_DeoR [H]

EC number: NA

Molecular weight: Translated: 30102; Mature: 30102

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: PS00894 HTH_DEOR_1 ; PS51000 HTH_DEOR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHATIEWTGEDSMHEKERHNVILSAVQERSVVTVADFCALTGASEATVRRDINTLHTQDK
CCEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEHHHHHHHCCCCHHHHHHHHHHHHHHHH
LRRVRGGAEAITPPQFVGLAGRTFAVNEAMRGPEKQAIARAAVELCDDGDAIIINGGTTT
HHHHCCCCCCCCCCHHHCCCCCEEEEHHHHCCCHHHHHHHHHHHHCCCCCEEEEECCCCE
FQMVHPLAMRRMQIFTNSFPIAEHLLKHSKNTIMLSGGVIYREQNIILSPFDNDVTRNFA
EHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEECCEEEEECCEEECCCCCHHHHHHH
ATRMFMGAQGLGPLGLMEADPMLIQAEQKLIGQADELVVLVDSSKFENRSSLVLCPLTRI
HHHHHHCCCCCCCCCCCCCCCCEEEHHHHHHCCCCCEEEEEECCCCCCCCCEEEEECCEE
DVVITDDGISDRAAAMLEAADIKLVVAQTSAAADTGSG
EEEEECCCCCHHHHHHHHHCCEEEEEEECCCCCCCCCC
>Mature Secondary Structure
MHATIEWTGEDSMHEKERHNVILSAVQERSVVTVADFCALTGASEATVRRDINTLHTQDK
CCEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEHHHHHHHCCCCHHHHHHHHHHHHHHHH
LRRVRGGAEAITPPQFVGLAGRTFAVNEAMRGPEKQAIARAAVELCDDGDAIIINGGTTT
HHHHCCCCCCCCCCHHHCCCCCEEEEHHHHCCCHHHHHHHHHHHHCCCCCEEEEECCCCE
FQMVHPLAMRRMQIFTNSFPIAEHLLKHSKNTIMLSGGVIYREQNIILSPFDNDVTRNFA
EHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEECCEEEEECCEEECCCCCHHHHHHH
ATRMFMGAQGLGPLGLMEADPMLIQAEQKLIGQADELVVLVDSSKFENRSSLVLCPLTRI
HHHHHHCCCCCCCCCCCCCCCCEEEHHHHHHCCCCCEEEEEECCCCCCCCCEEEEECCEE
DVVITDDGISDRAAAMLEAADIKLVVAQTSAAADTGSG
EEEEECCCCCHHHHHHHHHCCEEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA