Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

Click here to switch to the map view.

The map label for this gene is 89055081

Identifier: 89055081

GI number: 89055081

Start: 2600079

End: 2602385

Strand: Direct

Name: 89055081

Synonym: Jann_2590

Alternate gene names: NA

Gene position: 2600079-2602385 (Clockwise)

Preceding gene: 89055080

Following gene: 89055084

Centisome position: 60.22

GC content: 66.67

Gene sequence:

>2307_bases
ATGCCCAACACCACACCGTCGCCTGTTCAGGCCCGCATCCTCGCGGAAGCACACGATCCGCTGATCGCCCGCATCTGGCG
TGCCATGGCAGGTCTGCGCTCGGTCGTGGGGTTCATGAACACCGGCGCCCACCCCGATGACGAGACGACGGCAATGTTGG
CGGCGCTGTGGCTGCGCGACGGGGTGAACCTGTCCTATGCCTGCTCCACCCGGGGCGAAGGGGGGCAAAACGACATCGGG
ACGGAGGCGGGGCCGGATCTGGGCGCATTGCGCACGGCAGAGATGGAGCGGGCCTCGGACGTGCTCGACATGGTGCTTTA
CTGGCACGGACAGTCGGCGGATGACACGATAACCGATTTCCGCTTTTCCAAATCCGGCAAGGAGACGATGGCGATCTGGG
GCCGAGAGCGGTTGATGCAACGGTTTGTGGAAATCATCCGCACCCAGCGCCCCGATATCATCTGCCCCACCTTCCTCGAC
ATTCCTGGCCAGCATGGCCACCACCGCGCCATGACGGAGGCCGCCCACGATGTGATCGCGGCGGCGGCGGACCCGGATTT
CGCCTGCGACCTGCCGGTTTGGCAGGTATCCAAGCTCTACCTACCGGCCTTCTCCGGGGCGGGCGGATCCTATGACGACG
AGGTTCCCCCGCCGCCCGCGACCGTGACCGTCGCGGCCTCGGGGCGCGATCCGATCCTTGGCATGAGTTATGAGCGGATC
GGCCAATGGTCCCGGCAATTTCATCGCACGCAAGGCATGGGCCGGTGGGTGGCAGCTGGGGAGGAACGGGATTGGCCGCT
GCATCTGGCTTGGTCCAATGTGGGCGAAGACGCGGGCGCGGTCACCGATCACCTGCCGCAGACGTTGGCTGATATCGGGT
TGAGCGACGCCCAACGTGCCGTGGATGCGGTGATCGCCGCCTTCCCCGACGTCTGCGTCATGGGACGCCTGGGGTCCGAG
GCTTACGCCGCGCTGATGGCCGCAAACGTCACGCCCGAGCACCGCCACCGGTTGGAGCGCAAACGGCTCCAGATGGCGCG
ATTGCTGCATTTGGTGGAGGGTATCTCCGCCCGCGCCCTGCCTGCGCGCTGCGCTGTGGAACCGGGGACATCCGTGGCAG
TGTCGACCGAAGTTGCGGGCGACGCAGAGGTCGTGCTTGTGCCCCGCGACGGAATGCAGGTCACGGCGGACGGGTTGCAG
ATCAACACAGACGCCGCCCCCACTGACCCCTACCCCGATACGTTCGACCCGCTGATCCCGCGCCTGCCTGCCGCACGGGT
CCGCGCGCAGGTCCATGGCGTTCACGTGGACCGGGATGTGACACTGGAACAACCGGTTCTGGTGCTGCCGCTCCCCCGGG
CCAACCTGTCGACAGAACGGGCGATCCTGAACCTTGCGCGGCCCGACCGCAGCCTGTCTGTTGATGTGACGGCCCAGGAC
GCGGCCTTTGATTTGCCGCCCGGGTTTGCGCAGACCTGGTCCACCGACGGCGCGACGCTGACCGTGCCCGCAGATGCGAC
GGAGGGCTTGCATGTTCTGCCCGTCATGGTCGGGAGCACGCCTGCCCGGACCGCCAAAGTGTTGGATCACGCGCATATTT
CGCAAACGCTCAGCCACCGCCCGGCGGTGTTTTCGCTGCGGCTGGCCAACGTCGCCCTGCCGGATGCCCGGGTGGCGTAT
ATCGGCGCGGGCAACGACCGCGTTGCGCCTGCATTGCGCGCGGTGGGCATGGACGTGACGGATCTGAGCGACGCGGACCT
GTCGCGCGCCGCGCCATTTGCGGGCTATGACACCGTGTTGGTCGGCGTGTTCGCCTACCGGTTCCGCGGCGCGTTGGCTG
CGGTAATCGGTACGCTGAACGATTGGGTGAAGCACGGCGGCACGCTAGTGACGCTCTATCACCGCCCGGGCGACAATTGG
GACCCGCAGGAGACCCCGCCTGCGCCAATGGCCATCGGCTCCCCCTCCCTGCGCTGGCGGATCACGGATGCAGCGGCCGA
AGTGACGGTGTTGCAGCCCGAGCACCCCGTGTTCCAGGGACCCAACACGATTGGTCCAGAGGATTGGGCGGGCTGGCAGA
AGGAACGCGGGCTATATTTTGCCAAGTCTTGGGACGGGGTCTATGCGCCGCTTCTCAGCATGTCAGACCCGGATGAACAG
CCCTTGGAGGGCGGGCTTCTGGTGGGCCAGATCGGGCACGGCTGCCATGCCCATGTCGCGTTGAACCTGCACCACCAGTT
GGAGCATCTGGTGCCGGGCGCCTACCGGCTGACGGCGAACCTTCTGGCCCTGCGCGGCAGCGGTTAA

Upstream 100 bases:

>100_bases
GGCACCGCGGGCCGCATGGCCGCGACCCTTGGGGCGGCGGCGCTGGTCGTGAATTCCGCCCTCTCGCCCCGTCTTATGGA
CACACAATAGGACCCTCCCC

Downstream 100 bases:

>100_bases
CGGCCCGACACGGAGGCGTCGTAATCCCCCAGCGCCGACGACAGGGCCAGCCCGGTGGGCACGGAGTGACGGTCGCAGAA
TTCCTGCCAGATAGCGCTCG

Product: hypothetical protein

Products: NA

Alternate protein names: GlcNAc-PI De-N-Acetylase Family Protein; GlcNAc-PI De-N-Acetylase Family; Lmbe Family Protein; Secreted Protein; N-Acetylglucosaminylphosphatidylinositoldeacetylase

Number of amino acids: Translated: 768; Mature: 767

Protein sequence:

>768_residues
MPNTTPSPVQARILAEAHDPLIARIWRAMAGLRSVVGFMNTGAHPDDETTAMLAALWLRDGVNLSYACSTRGEGGQNDIG
TEAGPDLGALRTAEMERASDVLDMVLYWHGQSADDTITDFRFSKSGKETMAIWGRERLMQRFVEIIRTQRPDIICPTFLD
IPGQHGHHRAMTEAAHDVIAAAADPDFACDLPVWQVSKLYLPAFSGAGGSYDDEVPPPPATVTVAASGRDPILGMSYERI
GQWSRQFHRTQGMGRWVAAGEERDWPLHLAWSNVGEDAGAVTDHLPQTLADIGLSDAQRAVDAVIAAFPDVCVMGRLGSE
AYAALMAANVTPEHRHRLERKRLQMARLLHLVEGISARALPARCAVEPGTSVAVSTEVAGDAEVVLVPRDGMQVTADGLQ
INTDAAPTDPYPDTFDPLIPRLPAARVRAQVHGVHVDRDVTLEQPVLVLPLPRANLSTERAILNLARPDRSLSVDVTAQD
AAFDLPPGFAQTWSTDGATLTVPADATEGLHVLPVMVGSTPARTAKVLDHAHISQTLSHRPAVFSLRLANVALPDARVAY
IGAGNDRVAPALRAVGMDVTDLSDADLSRAAPFAGYDTVLVGVFAYRFRGALAAVIGTLNDWVKHGGTLVTLYHRPGDNW
DPQETPPAPMAIGSPSLRWRITDAAAEVTVLQPEHPVFQGPNTIGPEDWAGWQKERGLYFAKSWDGVYAPLLSMSDPDEQ
PLEGGLLVGQIGHGCHAHVALNLHHQLEHLVPGAYRLTANLLALRGSG

Sequences:

>Translated_768_residues
MPNTTPSPVQARILAEAHDPLIARIWRAMAGLRSVVGFMNTGAHPDDETTAMLAALWLRDGVNLSYACSTRGEGGQNDIG
TEAGPDLGALRTAEMERASDVLDMVLYWHGQSADDTITDFRFSKSGKETMAIWGRERLMQRFVEIIRTQRPDIICPTFLD
IPGQHGHHRAMTEAAHDVIAAAADPDFACDLPVWQVSKLYLPAFSGAGGSYDDEVPPPPATVTVAASGRDPILGMSYERI
GQWSRQFHRTQGMGRWVAAGEERDWPLHLAWSNVGEDAGAVTDHLPQTLADIGLSDAQRAVDAVIAAFPDVCVMGRLGSE
AYAALMAANVTPEHRHRLERKRLQMARLLHLVEGISARALPARCAVEPGTSVAVSTEVAGDAEVVLVPRDGMQVTADGLQ
INTDAAPTDPYPDTFDPLIPRLPAARVRAQVHGVHVDRDVTLEQPVLVLPLPRANLSTERAILNLARPDRSLSVDVTAQD
AAFDLPPGFAQTWSTDGATLTVPADATEGLHVLPVMVGSTPARTAKVLDHAHISQTLSHRPAVFSLRLANVALPDARVAY
IGAGNDRVAPALRAVGMDVTDLSDADLSRAAPFAGYDTVLVGVFAYRFRGALAAVIGTLNDWVKHGGTLVTLYHRPGDNW
DPQETPPAPMAIGSPSLRWRITDAAAEVTVLQPEHPVFQGPNTIGPEDWAGWQKERGLYFAKSWDGVYAPLLSMSDPDEQ
PLEGGLLVGQIGHGCHAHVALNLHHQLEHLVPGAYRLTANLLALRGSG
>Mature_767_residues
PNTTPSPVQARILAEAHDPLIARIWRAMAGLRSVVGFMNTGAHPDDETTAMLAALWLRDGVNLSYACSTRGEGGQNDIGT
EAGPDLGALRTAEMERASDVLDMVLYWHGQSADDTITDFRFSKSGKETMAIWGRERLMQRFVEIIRTQRPDIICPTFLDI
PGQHGHHRAMTEAAHDVIAAAADPDFACDLPVWQVSKLYLPAFSGAGGSYDDEVPPPPATVTVAASGRDPILGMSYERIG
QWSRQFHRTQGMGRWVAAGEERDWPLHLAWSNVGEDAGAVTDHLPQTLADIGLSDAQRAVDAVIAAFPDVCVMGRLGSEA
YAALMAANVTPEHRHRLERKRLQMARLLHLVEGISARALPARCAVEPGTSVAVSTEVAGDAEVVLVPRDGMQVTADGLQI
NTDAAPTDPYPDTFDPLIPRLPAARVRAQVHGVHVDRDVTLEQPVLVLPLPRANLSTERAILNLARPDRSLSVDVTAQDA
AFDLPPGFAQTWSTDGATLTVPADATEGLHVLPVMVGSTPARTAKVLDHAHISQTLSHRPAVFSLRLANVALPDARVAYI
GAGNDRVAPALRAVGMDVTDLSDADLSRAAPFAGYDTVLVGVFAYRFRGALAAVIGTLNDWVKHGGTLVTLYHRPGDNWD
PQETPPAPMAIGSPSLRWRITDAAAEVTVLQPEHPVFQGPNTIGPEDWAGWQKERGLYFAKSWDGVYAPLLSMSDPDEQP
LEGGLLVGQIGHGCHAHVALNLHHQLEHLVPGAYRLTANLLALRGSG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 82689; Mature: 82558

Theoretical pI: Translated: 5.43; Mature: 5.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNTTPSPVQARILAEAHDPLIARIWRAMAGLRSVVGFMNTGAHPDDETTAMLAALWLRD
CCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHC
GVNLSYACSTRGEGGQNDIGTEAGPDLGALRTAEMERASDVLDMVLYWHGQSADDTITDF
CCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHE
RFSKSGKETMAIWGRERLMQRFVEIIRTQRPDIICPTFLDIPGQHGHHRAMTEAAHDVIA
EECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHCCCCCCCCHHHHHHHHHHHHE
AAADPDFACDLPVWQVSKLYLPAFSGAGGSYDDEVPPPPATVTVAASGRDPILGMSYERI
ECCCCCCCCCCCHHHHHHHEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHH
GQWSRQFHRTQGMGRWVAAGEERDWPLHLAWSNVGEDAGAVTDHLPQTLADIGLSDAQRA
HHHHHHHHHHCCCCCEEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHH
VDAVIAAFPDVCVMGRLGSEAYAALMAANVTPEHRHRLERKRLQMARLLHLVEGISARAL
HHHHHHHCCCHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PARCAVEPGTSVAVSTEVAGDAEVVLVPRDGMQVTADGLQINTDAAPTDPYPDTFDPLIP
CCCEECCCCCCEEEEEECCCCEEEEEECCCCCEEEECCEEEECCCCCCCCCCCCCCHHHC
RLPAARVRAQVHGVHVDRDVTLEQPVLVLPLPRANLSTERAILNLARPDRSLSVDVTAQD
CCCHHHHHHHHEEEEECCCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCCEEEEEEECC
AAFDLPPGFAQTWSTDGATLTVPADATEGLHVLPVMVGSTPARTAKVLDHAHISQTLSHR
CCCCCCCCCHHHCCCCCCEEEECCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCC
PAVFSLRLANVALPDARVAYIGAGNDRVAPALRAVGMDVTDLSDADLSRAAPFAGYDTVL
CCEEEEEECCEECCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCHHHCCCCCCHHHHH
VGVFAYRFRGALAAVIGTLNDWVKHGGTLVTLYHRPGDNWDPQETPPAPMAIGSPSLRWR
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCEEECCCCEEEE
ITDAAAEVTVLQPEHPVFQGPNTIGPEDWAGWQKERGLYFAKSWDGVYAPLLSMSDPDEQ
EECCCCEEEEECCCCCCCCCCCCCCCCHHCCHHHHCCEEEEECCCCHHHHHHCCCCCCCC
PLEGGLLVGQIGHGCHAHVALNLHHQLEHLVPGAYRLTANLLALRGSG
CCCCCEEEEECCCCCEEEEEEEHHHHHHHHCCCHHEEEEEEEEEECCC
>Mature Secondary Structure 
PNTTPSPVQARILAEAHDPLIARIWRAMAGLRSVVGFMNTGAHPDDETTAMLAALWLRD
CCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHC
GVNLSYACSTRGEGGQNDIGTEAGPDLGALRTAEMERASDVLDMVLYWHGQSADDTITDF
CCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHE
RFSKSGKETMAIWGRERLMQRFVEIIRTQRPDIICPTFLDIPGQHGHHRAMTEAAHDVIA
EECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHCCCCCCCCHHHHHHHHHHHHE
AAADPDFACDLPVWQVSKLYLPAFSGAGGSYDDEVPPPPATVTVAASGRDPILGMSYERI
ECCCCCCCCCCCHHHHHHHEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHH
GQWSRQFHRTQGMGRWVAAGEERDWPLHLAWSNVGEDAGAVTDHLPQTLADIGLSDAQRA
HHHHHHHHHHCCCCCEEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHH
VDAVIAAFPDVCVMGRLGSEAYAALMAANVTPEHRHRLERKRLQMARLLHLVEGISARAL
HHHHHHHCCCHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PARCAVEPGTSVAVSTEVAGDAEVVLVPRDGMQVTADGLQINTDAAPTDPYPDTFDPLIP
CCCEECCCCCCEEEEEECCCCEEEEEECCCCCEEEECCEEEECCCCCCCCCCCCCCHHHC
RLPAARVRAQVHGVHVDRDVTLEQPVLVLPLPRANLSTERAILNLARPDRSLSVDVTAQD
CCCHHHHHHHHEEEEECCCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCCEEEEEEECC
AAFDLPPGFAQTWSTDGATLTVPADATEGLHVLPVMVGSTPARTAKVLDHAHISQTLSHR
CCCCCCCCCHHHCCCCCCEEEECCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCC
PAVFSLRLANVALPDARVAYIGAGNDRVAPALRAVGMDVTDLSDADLSRAAPFAGYDTVL
CCEEEEEECCEECCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCHHHCCCCCCHHHHH
VGVFAYRFRGALAAVIGTLNDWVKHGGTLVTLYHRPGDNWDPQETPPAPMAIGSPSLRWR
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCEEECCCCEEEE
ITDAAAEVTVLQPEHPVFQGPNTIGPEDWAGWQKERGLYFAKSWDGVYAPLLSMSDPDEQ
EECCCCEEEEECCCCCCCCCCCCCCCCHHCCHHHHCCEEEEECCCCHHHHHHCCCCCCCC
PLEGGLLVGQIGHGCHAHVALNLHHQLEHLVPGAYRLTANLLALRGSG
CCCCCEEEEECCCCCEEEEEEEHHHHHHHHCCCHHEEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA