| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89055081
Identifier: 89055081
GI number: 89055081
Start: 2600079
End: 2602385
Strand: Direct
Name: 89055081
Synonym: Jann_2590
Alternate gene names: NA
Gene position: 2600079-2602385 (Clockwise)
Preceding gene: 89055080
Following gene: 89055084
Centisome position: 60.22
GC content: 66.67
Gene sequence:
>2307_bases ATGCCCAACACCACACCGTCGCCTGTTCAGGCCCGCATCCTCGCGGAAGCACACGATCCGCTGATCGCCCGCATCTGGCG TGCCATGGCAGGTCTGCGCTCGGTCGTGGGGTTCATGAACACCGGCGCCCACCCCGATGACGAGACGACGGCAATGTTGG CGGCGCTGTGGCTGCGCGACGGGGTGAACCTGTCCTATGCCTGCTCCACCCGGGGCGAAGGGGGGCAAAACGACATCGGG ACGGAGGCGGGGCCGGATCTGGGCGCATTGCGCACGGCAGAGATGGAGCGGGCCTCGGACGTGCTCGACATGGTGCTTTA CTGGCACGGACAGTCGGCGGATGACACGATAACCGATTTCCGCTTTTCCAAATCCGGCAAGGAGACGATGGCGATCTGGG GCCGAGAGCGGTTGATGCAACGGTTTGTGGAAATCATCCGCACCCAGCGCCCCGATATCATCTGCCCCACCTTCCTCGAC ATTCCTGGCCAGCATGGCCACCACCGCGCCATGACGGAGGCCGCCCACGATGTGATCGCGGCGGCGGCGGACCCGGATTT CGCCTGCGACCTGCCGGTTTGGCAGGTATCCAAGCTCTACCTACCGGCCTTCTCCGGGGCGGGCGGATCCTATGACGACG AGGTTCCCCCGCCGCCCGCGACCGTGACCGTCGCGGCCTCGGGGCGCGATCCGATCCTTGGCATGAGTTATGAGCGGATC GGCCAATGGTCCCGGCAATTTCATCGCACGCAAGGCATGGGCCGGTGGGTGGCAGCTGGGGAGGAACGGGATTGGCCGCT GCATCTGGCTTGGTCCAATGTGGGCGAAGACGCGGGCGCGGTCACCGATCACCTGCCGCAGACGTTGGCTGATATCGGGT TGAGCGACGCCCAACGTGCCGTGGATGCGGTGATCGCCGCCTTCCCCGACGTCTGCGTCATGGGACGCCTGGGGTCCGAG GCTTACGCCGCGCTGATGGCCGCAAACGTCACGCCCGAGCACCGCCACCGGTTGGAGCGCAAACGGCTCCAGATGGCGCG ATTGCTGCATTTGGTGGAGGGTATCTCCGCCCGCGCCCTGCCTGCGCGCTGCGCTGTGGAACCGGGGACATCCGTGGCAG TGTCGACCGAAGTTGCGGGCGACGCAGAGGTCGTGCTTGTGCCCCGCGACGGAATGCAGGTCACGGCGGACGGGTTGCAG ATCAACACAGACGCCGCCCCCACTGACCCCTACCCCGATACGTTCGACCCGCTGATCCCGCGCCTGCCTGCCGCACGGGT CCGCGCGCAGGTCCATGGCGTTCACGTGGACCGGGATGTGACACTGGAACAACCGGTTCTGGTGCTGCCGCTCCCCCGGG CCAACCTGTCGACAGAACGGGCGATCCTGAACCTTGCGCGGCCCGACCGCAGCCTGTCTGTTGATGTGACGGCCCAGGAC GCGGCCTTTGATTTGCCGCCCGGGTTTGCGCAGACCTGGTCCACCGACGGCGCGACGCTGACCGTGCCCGCAGATGCGAC GGAGGGCTTGCATGTTCTGCCCGTCATGGTCGGGAGCACGCCTGCCCGGACCGCCAAAGTGTTGGATCACGCGCATATTT CGCAAACGCTCAGCCACCGCCCGGCGGTGTTTTCGCTGCGGCTGGCCAACGTCGCCCTGCCGGATGCCCGGGTGGCGTAT ATCGGCGCGGGCAACGACCGCGTTGCGCCTGCATTGCGCGCGGTGGGCATGGACGTGACGGATCTGAGCGACGCGGACCT GTCGCGCGCCGCGCCATTTGCGGGCTATGACACCGTGTTGGTCGGCGTGTTCGCCTACCGGTTCCGCGGCGCGTTGGCTG CGGTAATCGGTACGCTGAACGATTGGGTGAAGCACGGCGGCACGCTAGTGACGCTCTATCACCGCCCGGGCGACAATTGG GACCCGCAGGAGACCCCGCCTGCGCCAATGGCCATCGGCTCCCCCTCCCTGCGCTGGCGGATCACGGATGCAGCGGCCGA AGTGACGGTGTTGCAGCCCGAGCACCCCGTGTTCCAGGGACCCAACACGATTGGTCCAGAGGATTGGGCGGGCTGGCAGA AGGAACGCGGGCTATATTTTGCCAAGTCTTGGGACGGGGTCTATGCGCCGCTTCTCAGCATGTCAGACCCGGATGAACAG CCCTTGGAGGGCGGGCTTCTGGTGGGCCAGATCGGGCACGGCTGCCATGCCCATGTCGCGTTGAACCTGCACCACCAGTT GGAGCATCTGGTGCCGGGCGCCTACCGGCTGACGGCGAACCTTCTGGCCCTGCGCGGCAGCGGTTAA
Upstream 100 bases:
>100_bases GGCACCGCGGGCCGCATGGCCGCGACCCTTGGGGCGGCGGCGCTGGTCGTGAATTCCGCCCTCTCGCCCCGTCTTATGGA CACACAATAGGACCCTCCCC
Downstream 100 bases:
>100_bases CGGCCCGACACGGAGGCGTCGTAATCCCCCAGCGCCGACGACAGGGCCAGCCCGGTGGGCACGGAGTGACGGTCGCAGAA TTCCTGCCAGATAGCGCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: GlcNAc-PI De-N-Acetylase Family Protein; GlcNAc-PI De-N-Acetylase Family; Lmbe Family Protein; Secreted Protein; N-Acetylglucosaminylphosphatidylinositoldeacetylase
Number of amino acids: Translated: 768; Mature: 767
Protein sequence:
>768_residues MPNTTPSPVQARILAEAHDPLIARIWRAMAGLRSVVGFMNTGAHPDDETTAMLAALWLRDGVNLSYACSTRGEGGQNDIG TEAGPDLGALRTAEMERASDVLDMVLYWHGQSADDTITDFRFSKSGKETMAIWGRERLMQRFVEIIRTQRPDIICPTFLD IPGQHGHHRAMTEAAHDVIAAAADPDFACDLPVWQVSKLYLPAFSGAGGSYDDEVPPPPATVTVAASGRDPILGMSYERI GQWSRQFHRTQGMGRWVAAGEERDWPLHLAWSNVGEDAGAVTDHLPQTLADIGLSDAQRAVDAVIAAFPDVCVMGRLGSE AYAALMAANVTPEHRHRLERKRLQMARLLHLVEGISARALPARCAVEPGTSVAVSTEVAGDAEVVLVPRDGMQVTADGLQ INTDAAPTDPYPDTFDPLIPRLPAARVRAQVHGVHVDRDVTLEQPVLVLPLPRANLSTERAILNLARPDRSLSVDVTAQD AAFDLPPGFAQTWSTDGATLTVPADATEGLHVLPVMVGSTPARTAKVLDHAHISQTLSHRPAVFSLRLANVALPDARVAY IGAGNDRVAPALRAVGMDVTDLSDADLSRAAPFAGYDTVLVGVFAYRFRGALAAVIGTLNDWVKHGGTLVTLYHRPGDNW DPQETPPAPMAIGSPSLRWRITDAAAEVTVLQPEHPVFQGPNTIGPEDWAGWQKERGLYFAKSWDGVYAPLLSMSDPDEQ PLEGGLLVGQIGHGCHAHVALNLHHQLEHLVPGAYRLTANLLALRGSG
Sequences:
>Translated_768_residues MPNTTPSPVQARILAEAHDPLIARIWRAMAGLRSVVGFMNTGAHPDDETTAMLAALWLRDGVNLSYACSTRGEGGQNDIG TEAGPDLGALRTAEMERASDVLDMVLYWHGQSADDTITDFRFSKSGKETMAIWGRERLMQRFVEIIRTQRPDIICPTFLD IPGQHGHHRAMTEAAHDVIAAAADPDFACDLPVWQVSKLYLPAFSGAGGSYDDEVPPPPATVTVAASGRDPILGMSYERI GQWSRQFHRTQGMGRWVAAGEERDWPLHLAWSNVGEDAGAVTDHLPQTLADIGLSDAQRAVDAVIAAFPDVCVMGRLGSE AYAALMAANVTPEHRHRLERKRLQMARLLHLVEGISARALPARCAVEPGTSVAVSTEVAGDAEVVLVPRDGMQVTADGLQ INTDAAPTDPYPDTFDPLIPRLPAARVRAQVHGVHVDRDVTLEQPVLVLPLPRANLSTERAILNLARPDRSLSVDVTAQD AAFDLPPGFAQTWSTDGATLTVPADATEGLHVLPVMVGSTPARTAKVLDHAHISQTLSHRPAVFSLRLANVALPDARVAY IGAGNDRVAPALRAVGMDVTDLSDADLSRAAPFAGYDTVLVGVFAYRFRGALAAVIGTLNDWVKHGGTLVTLYHRPGDNW DPQETPPAPMAIGSPSLRWRITDAAAEVTVLQPEHPVFQGPNTIGPEDWAGWQKERGLYFAKSWDGVYAPLLSMSDPDEQ PLEGGLLVGQIGHGCHAHVALNLHHQLEHLVPGAYRLTANLLALRGSG >Mature_767_residues PNTTPSPVQARILAEAHDPLIARIWRAMAGLRSVVGFMNTGAHPDDETTAMLAALWLRDGVNLSYACSTRGEGGQNDIGT EAGPDLGALRTAEMERASDVLDMVLYWHGQSADDTITDFRFSKSGKETMAIWGRERLMQRFVEIIRTQRPDIICPTFLDI PGQHGHHRAMTEAAHDVIAAAADPDFACDLPVWQVSKLYLPAFSGAGGSYDDEVPPPPATVTVAASGRDPILGMSYERIG QWSRQFHRTQGMGRWVAAGEERDWPLHLAWSNVGEDAGAVTDHLPQTLADIGLSDAQRAVDAVIAAFPDVCVMGRLGSEA YAALMAANVTPEHRHRLERKRLQMARLLHLVEGISARALPARCAVEPGTSVAVSTEVAGDAEVVLVPRDGMQVTADGLQI NTDAAPTDPYPDTFDPLIPRLPAARVRAQVHGVHVDRDVTLEQPVLVLPLPRANLSTERAILNLARPDRSLSVDVTAQDA AFDLPPGFAQTWSTDGATLTVPADATEGLHVLPVMVGSTPARTAKVLDHAHISQTLSHRPAVFSLRLANVALPDARVAYI GAGNDRVAPALRAVGMDVTDLSDADLSRAAPFAGYDTVLVGVFAYRFRGALAAVIGTLNDWVKHGGTLVTLYHRPGDNWD PQETPPAPMAIGSPSLRWRITDAAAEVTVLQPEHPVFQGPNTIGPEDWAGWQKERGLYFAKSWDGVYAPLLSMSDPDEQP LEGGLLVGQIGHGCHAHVALNLHHQLEHLVPGAYRLTANLLALRGSG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 82689; Mature: 82558
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNTTPSPVQARILAEAHDPLIARIWRAMAGLRSVVGFMNTGAHPDDETTAMLAALWLRD CCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHC GVNLSYACSTRGEGGQNDIGTEAGPDLGALRTAEMERASDVLDMVLYWHGQSADDTITDF CCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHE RFSKSGKETMAIWGRERLMQRFVEIIRTQRPDIICPTFLDIPGQHGHHRAMTEAAHDVIA EECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHCCCCCCCCHHHHHHHHHHHHE AAADPDFACDLPVWQVSKLYLPAFSGAGGSYDDEVPPPPATVTVAASGRDPILGMSYERI ECCCCCCCCCCCHHHHHHHEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHH GQWSRQFHRTQGMGRWVAAGEERDWPLHLAWSNVGEDAGAVTDHLPQTLADIGLSDAQRA HHHHHHHHHHCCCCCEEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHH VDAVIAAFPDVCVMGRLGSEAYAALMAANVTPEHRHRLERKRLQMARLLHLVEGISARAL HHHHHHHCCCHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PARCAVEPGTSVAVSTEVAGDAEVVLVPRDGMQVTADGLQINTDAAPTDPYPDTFDPLIP CCCEECCCCCCEEEEEECCCCEEEEEECCCCCEEEECCEEEECCCCCCCCCCCCCCHHHC RLPAARVRAQVHGVHVDRDVTLEQPVLVLPLPRANLSTERAILNLARPDRSLSVDVTAQD CCCHHHHHHHHEEEEECCCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCCEEEEEEECC AAFDLPPGFAQTWSTDGATLTVPADATEGLHVLPVMVGSTPARTAKVLDHAHISQTLSHR CCCCCCCCCHHHCCCCCCEEEECCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCC PAVFSLRLANVALPDARVAYIGAGNDRVAPALRAVGMDVTDLSDADLSRAAPFAGYDTVL CCEEEEEECCEECCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCHHHCCCCCCHHHHH VGVFAYRFRGALAAVIGTLNDWVKHGGTLVTLYHRPGDNWDPQETPPAPMAIGSPSLRWR HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCEEECCCCEEEE ITDAAAEVTVLQPEHPVFQGPNTIGPEDWAGWQKERGLYFAKSWDGVYAPLLSMSDPDEQ EECCCCEEEEECCCCCCCCCCCCCCCCHHCCHHHHCCEEEEECCCCHHHHHHCCCCCCCC PLEGGLLVGQIGHGCHAHVALNLHHQLEHLVPGAYRLTANLLALRGSG CCCCCEEEEECCCCCEEEEEEEHHHHHHHHCCCHHEEEEEEEEEECCC >Mature Secondary Structure PNTTPSPVQARILAEAHDPLIARIWRAMAGLRSVVGFMNTGAHPDDETTAMLAALWLRD CCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHC GVNLSYACSTRGEGGQNDIGTEAGPDLGALRTAEMERASDVLDMVLYWHGQSADDTITDF CCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHE RFSKSGKETMAIWGRERLMQRFVEIIRTQRPDIICPTFLDIPGQHGHHRAMTEAAHDVIA EECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHCCCCCCCCHHHHHHHHHHHHE AAADPDFACDLPVWQVSKLYLPAFSGAGGSYDDEVPPPPATVTVAASGRDPILGMSYERI ECCCCCCCCCCCHHHHHHHEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHH GQWSRQFHRTQGMGRWVAAGEERDWPLHLAWSNVGEDAGAVTDHLPQTLADIGLSDAQRA HHHHHHHHHHCCCCCEEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHH VDAVIAAFPDVCVMGRLGSEAYAALMAANVTPEHRHRLERKRLQMARLLHLVEGISARAL HHHHHHHCCCHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PARCAVEPGTSVAVSTEVAGDAEVVLVPRDGMQVTADGLQINTDAAPTDPYPDTFDPLIP CCCEECCCCCCEEEEEECCCCEEEEEECCCCCEEEECCEEEECCCCCCCCCCCCCCHHHC RLPAARVRAQVHGVHVDRDVTLEQPVLVLPLPRANLSTERAILNLARPDRSLSVDVTAQD CCCHHHHHHHHEEEEECCCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCCEEEEEEECC AAFDLPPGFAQTWSTDGATLTVPADATEGLHVLPVMVGSTPARTAKVLDHAHISQTLSHR CCCCCCCCCHHHCCCCCCEEEECCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCC PAVFSLRLANVALPDARVAYIGAGNDRVAPALRAVGMDVTDLSDADLSRAAPFAGYDTVL CCEEEEEECCEECCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCHHHCCCCCCHHHHH VGVFAYRFRGALAAVIGTLNDWVKHGGTLVTLYHRPGDNWDPQETPPAPMAIGSPSLRWR HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCEEECCCCEEEE ITDAAAEVTVLQPEHPVFQGPNTIGPEDWAGWQKERGLYFAKSWDGVYAPLLSMSDPDEQ EECCCCEEEEECCCCCCCCCCCCCCCCHHCCHHHHCCEEEEECCCCHHHHHHCCCCCCCC PLEGGLLVGQIGHGCHAHVALNLHHQLEHLVPGAYRLTANLLALRGSG CCCCCEEEEECCCCCEEEEEEEHHHHHHHHCCCHHEEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA