| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89055070
Identifier: 89055070
GI number: 89055070
Start: 2589841
End: 2590449
Strand: Reverse
Name: 89055070
Synonym: Jann_2579
Alternate gene names: NA
Gene position: 2590449-2589841 (Counterclockwise)
Preceding gene: 89055071
Following gene: 89055068
Centisome position: 59.99
GC content: 62.07
Gene sequence:
>609_bases ATGAAAACGCTCGCCGCGCTGGTCTTTCCGGGCTTTGAAACGCTCGACTATTTTGGCCCGATGGAGATGTTGGGTGGCTC GGGAGAGCAGATTGAGATCATTACCGTCGGCCAAACGCTGCACCCGGTGCCAAGTGTCCACGGCCAGCGGATCGTGCCGG ACCGGCAGATCGCGGATGGCTCTACGTATGATCTGCTGTTCATCCCGGGCGGCGATACAGCGCTGGAGGCGGCCAAGGAT GTGGCGCTGACGGATTGGCTGAAGGAGACATCGGCGACGGCGGAGCGTGTGATGACCGTCTGCACTGGCTCCATCCTGTT GGGCATGACCGGTGTGTTGGACGGCAAACATGCGACGACCAACAAGAGGGATTTCCTTGCGACCGTCCCCCTCGCGCCCA ACGTAGACTGGGTGAGGGAGGCGCGTTGGGTGCAAGACGGCAAGTTCTACACCTCCTCAGGTGTGTCGGCGGGCATGGAT ATGGCGCTGGCTGTCATGGCGGATCTTTTCGGGATGGCCCTGGCCGACCGGATCGCGCTGGGGTGCGAATACGAGTGGCA AAAAGACCCCAACCGCGACCCCTTCGCGCATCTGGCCGGGTTGGTGTGA
Upstream 100 bases:
>100_bases CCATTCGCCCCGCCGCCCTTCTGGCCAAATACCCGGCTTCAACAGAGCGGTTCATCAAAGCTCACCTCGCCTGCGCGGAT CTGCAGATGGAGGCCGTGCC
Downstream 100 bases:
>100_bases CAGCCGTCTCACCGCGGCGACCCAGGCTTTTGCAAAAGCCTGATCAGGCCCTTGAAAGGGCCTGGGAAAACTCTTGCAAG AGTTTTCAGCCCTCCCACAG
Product: ThiJ/PfpI
Products: NA
Alternate protein names: Transcriptional Regulator; AraC Family Transcriptional Regulator; ThiJ/PfpI Domain Protein; ThiJ/PfpI Family Protein; Transcriptional Regulator AraC Family; DJ-1/PfpI Family Protein; AraC Family Transcription Regulator; Isonitrile Hydratase; DJ-1/PfpI Family; ThiJ/PfpI; AraC Family Regulatory Helix-Turn-Helix Protein; Intracellular Protease/Amidase; Transcriptional Regulator SyrB; Transcriptional Regulator Arac Family; Twin-Arginine Translocation Pathway Signal; Hydratase; ThiH/PfpI Family Amidotransferase; ADPA Family Transcriptional Regulator; AraC/XylS Family Transcriptional Regulator; Transcriptional Regulatory Protein; Intracellular Protease/Amidase Protein; AraC-Family Transcriptional Regulator; Regulatory Protein; Transcriptional Regulator AraC Family Protein; GATase1_AraC_1 Family Transcriptional Regulator; Transcriptional Regulator Protein; Transcription Regulator; ThiJ/PfpI Family Transcriptional Regulator Protein; DsbA Family ThiolDisulfide Interchange Protein; Transcription Regulator Protein Thij/Pfpi; Transcriptional Regulator ThiJ/PfpI Family Protein; Secreted Protein; ThiJ/PfpI Family Transcriptional Regulator
Number of amino acids: Translated: 202; Mature: 202
Protein sequence:
>202_residues MKTLAALVFPGFETLDYFGPMEMLGGSGEQIEIITVGQTLHPVPSVHGQRIVPDRQIADGSTYDLLFIPGGDTALEAAKD VALTDWLKETSATAERVMTVCTGSILLGMTGVLDGKHATTNKRDFLATVPLAPNVDWVREARWVQDGKFYTSSGVSAGMD MALAVMADLFGMALADRIALGCEYEWQKDPNRDPFAHLAGLV
Sequences:
>Translated_202_residues MKTLAALVFPGFETLDYFGPMEMLGGSGEQIEIITVGQTLHPVPSVHGQRIVPDRQIADGSTYDLLFIPGGDTALEAAKD VALTDWLKETSATAERVMTVCTGSILLGMTGVLDGKHATTNKRDFLATVPLAPNVDWVREARWVQDGKFYTSSGVSAGMD MALAVMADLFGMALADRIALGCEYEWQKDPNRDPFAHLAGLV >Mature_202_residues MKTLAALVFPGFETLDYFGPMEMLGGSGEQIEIITVGQTLHPVPSVHGQRIVPDRQIADGSTYDLLFIPGGDTALEAAKD VALTDWLKETSATAERVMTVCTGSILLGMTGVLDGKHATTNKRDFLATVPLAPNVDWVREARWVQDGKFYTSSGVSAGMD MALAVMADLFGMALADRIALGCEYEWQKDPNRDPFAHLAGLV
Specific function: Unknown
COG id: COG0693
COG function: function code R; Putative intracellular protease/amidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21777; Mature: 21777
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLAALVFPGFETLDYFGPMEMLGGSGEQIEIITVGQTLHPVPSVHGQRIVPDRQIADG CCCHHHHHCCCHHHHHHCCCHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCC STYDLLFIPGGDTALEAAKDVALTDWLKETSATAERVMTVCTGSILLGMTGVLDGKHATT CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC NKRDFLATVPLAPNVDWVREARWVQDGKFYTSSGVSAGMDMALAVMADLFGMALADRIAL CCCCEEEECCCCCCHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH GCEYEWQKDPNRDPFAHLAGLV CCCCCCCCCCCCCHHHHHHCCC >Mature Secondary Structure MKTLAALVFPGFETLDYFGPMEMLGGSGEQIEIITVGQTLHPVPSVHGQRIVPDRQIADG CCCHHHHHCCCHHHHHHCCCHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCC STYDLLFIPGGDTALEAAKDVALTDWLKETSATAERVMTVCTGSILLGMTGVLDGKHATT CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC NKRDFLATVPLAPNVDWVREARWVQDGKFYTSSGVSAGMDMALAVMADLFGMALADRIAL CCCCEEEECCCCCCHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH GCEYEWQKDPNRDPFAHLAGLV CCCCCCCCCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA