Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89055070

Identifier: 89055070

GI number: 89055070

Start: 2589841

End: 2590449

Strand: Reverse

Name: 89055070

Synonym: Jann_2579

Alternate gene names: NA

Gene position: 2590449-2589841 (Counterclockwise)

Preceding gene: 89055071

Following gene: 89055068

Centisome position: 59.99

GC content: 62.07

Gene sequence:

>609_bases
ATGAAAACGCTCGCCGCGCTGGTCTTTCCGGGCTTTGAAACGCTCGACTATTTTGGCCCGATGGAGATGTTGGGTGGCTC
GGGAGAGCAGATTGAGATCATTACCGTCGGCCAAACGCTGCACCCGGTGCCAAGTGTCCACGGCCAGCGGATCGTGCCGG
ACCGGCAGATCGCGGATGGCTCTACGTATGATCTGCTGTTCATCCCGGGCGGCGATACAGCGCTGGAGGCGGCCAAGGAT
GTGGCGCTGACGGATTGGCTGAAGGAGACATCGGCGACGGCGGAGCGTGTGATGACCGTCTGCACTGGCTCCATCCTGTT
GGGCATGACCGGTGTGTTGGACGGCAAACATGCGACGACCAACAAGAGGGATTTCCTTGCGACCGTCCCCCTCGCGCCCA
ACGTAGACTGGGTGAGGGAGGCGCGTTGGGTGCAAGACGGCAAGTTCTACACCTCCTCAGGTGTGTCGGCGGGCATGGAT
ATGGCGCTGGCTGTCATGGCGGATCTTTTCGGGATGGCCCTGGCCGACCGGATCGCGCTGGGGTGCGAATACGAGTGGCA
AAAAGACCCCAACCGCGACCCCTTCGCGCATCTGGCCGGGTTGGTGTGA

Upstream 100 bases:

>100_bases
CCATTCGCCCCGCCGCCCTTCTGGCCAAATACCCGGCTTCAACAGAGCGGTTCATCAAAGCTCACCTCGCCTGCGCGGAT
CTGCAGATGGAGGCCGTGCC

Downstream 100 bases:

>100_bases
CAGCCGTCTCACCGCGGCGACCCAGGCTTTTGCAAAAGCCTGATCAGGCCCTTGAAAGGGCCTGGGAAAACTCTTGCAAG
AGTTTTCAGCCCTCCCACAG

Product: ThiJ/PfpI

Products: NA

Alternate protein names: Transcriptional Regulator; AraC Family Transcriptional Regulator; ThiJ/PfpI Domain Protein; ThiJ/PfpI Family Protein; Transcriptional Regulator AraC Family; DJ-1/PfpI Family Protein; AraC Family Transcription Regulator; Isonitrile Hydratase; DJ-1/PfpI Family; ThiJ/PfpI; AraC Family Regulatory Helix-Turn-Helix Protein; Intracellular Protease/Amidase; Transcriptional Regulator SyrB; Transcriptional Regulator Arac Family; Twin-Arginine Translocation Pathway Signal; Hydratase; ThiH/PfpI Family Amidotransferase; ADPA Family Transcriptional Regulator; AraC/XylS Family Transcriptional Regulator; Transcriptional Regulatory Protein; Intracellular Protease/Amidase Protein; AraC-Family Transcriptional Regulator; Regulatory Protein; Transcriptional Regulator AraC Family Protein; GATase1_AraC_1 Family Transcriptional Regulator; Transcriptional Regulator Protein; Transcription Regulator; ThiJ/PfpI Family Transcriptional Regulator Protein; DsbA Family ThiolDisulfide Interchange Protein; Transcription Regulator Protein Thij/Pfpi; Transcriptional Regulator ThiJ/PfpI Family Protein; Secreted Protein; ThiJ/PfpI Family Transcriptional Regulator

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MKTLAALVFPGFETLDYFGPMEMLGGSGEQIEIITVGQTLHPVPSVHGQRIVPDRQIADGSTYDLLFIPGGDTALEAAKD
VALTDWLKETSATAERVMTVCTGSILLGMTGVLDGKHATTNKRDFLATVPLAPNVDWVREARWVQDGKFYTSSGVSAGMD
MALAVMADLFGMALADRIALGCEYEWQKDPNRDPFAHLAGLV

Sequences:

>Translated_202_residues
MKTLAALVFPGFETLDYFGPMEMLGGSGEQIEIITVGQTLHPVPSVHGQRIVPDRQIADGSTYDLLFIPGGDTALEAAKD
VALTDWLKETSATAERVMTVCTGSILLGMTGVLDGKHATTNKRDFLATVPLAPNVDWVREARWVQDGKFYTSSGVSAGMD
MALAVMADLFGMALADRIALGCEYEWQKDPNRDPFAHLAGLV
>Mature_202_residues
MKTLAALVFPGFETLDYFGPMEMLGGSGEQIEIITVGQTLHPVPSVHGQRIVPDRQIADGSTYDLLFIPGGDTALEAAKD
VALTDWLKETSATAERVMTVCTGSILLGMTGVLDGKHATTNKRDFLATVPLAPNVDWVREARWVQDGKFYTSSGVSAGMD
MALAVMADLFGMALADRIALGCEYEWQKDPNRDPFAHLAGLV

Specific function: Unknown

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21777; Mature: 21777

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTLAALVFPGFETLDYFGPMEMLGGSGEQIEIITVGQTLHPVPSVHGQRIVPDRQIADG
CCCHHHHHCCCHHHHHHCCCHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCC
STYDLLFIPGGDTALEAAKDVALTDWLKETSATAERVMTVCTGSILLGMTGVLDGKHATT
CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
NKRDFLATVPLAPNVDWVREARWVQDGKFYTSSGVSAGMDMALAVMADLFGMALADRIAL
CCCCEEEECCCCCCHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
GCEYEWQKDPNRDPFAHLAGLV
CCCCCCCCCCCCCHHHHHHCCC
>Mature Secondary Structure
MKTLAALVFPGFETLDYFGPMEMLGGSGEQIEIITVGQTLHPVPSVHGQRIVPDRQIADG
CCCHHHHHCCCHHHHHHCCCHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCC
STYDLLFIPGGDTALEAAKDVALTDWLKETSATAERVMTVCTGSILLGMTGVLDGKHATT
CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
NKRDFLATVPLAPNVDWVREARWVQDGKFYTSSGVSAGMDMALAVMADLFGMALADRIAL
CCCCEEEECCCCCCHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
GCEYEWQKDPNRDPFAHLAGLV
CCCCCCCCCCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA