Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89055069

Identifier: 89055069

GI number: 89055069

Start: 2588400

End: 2589755

Strand: Direct

Name: 89055069

Synonym: Jann_2578

Alternate gene names: NA

Gene position: 2588400-2589755 (Clockwise)

Preceding gene: 89055056

Following gene: 89055072

Centisome position: 59.94

GC content: 65.19

Gene sequence:

>1356_bases
ATGACCAGACTGCTCCTGACCGCATTGATGTGCATCGGCCTGTCCGGCGCGGTGGCCCAGGCCCAGGATCAGGGGCTGCC
CGACTACATCATCGAGGAGTTCGGCACGCCGCCCGCTGTGCCCGACGGCCCCCTGTCTGAGGATCTTTATGCCGCCATCT
CAGACCTCGTGACCCTCGGCACCAATCAGCGCGACTGGGATCTGGCTGATCGGGCCGCCTTTGACGCGGTCGAGGCCGCG
GGCGATCCGCGCGTGGCATGGATCATCACCGACATGATGCGCTTTGCCTGGCGGCCCGAGTTCAACGCCGTCCTGACGGA
AACCGCCATGGCGCTGATGGAGGTGGAGGTGCAGACCTTCCGCCACAGGGCCGAGTTGATCGACCATCTGATGGCATGGG
ACATGCCCGCCTACGACAATTACCTCGACCACAAGCGCACGATTTTTACCAATTTCATTCCCGGTTGGGAGCGGATCTTC
GTCGATGGGGACATCGATTGGCACATGGTGGATTGGGGTGGCGTTCTGATCGACGATCGCCCCTACGGCCGCTCGGACGA
GGTGTGCAACTGCATCCCCGCCATCGACAATCCCCGCGTCGAAACGGCGGCTGAGGCGACCTGGCTGGACGACGATGACA
TCGTCTTCGGCATTGTCCTCAACGGAGAGGCCCGCGCCTATCCCCGCCGCATCATGGAGGTGCGGGAGATGGTCAACGAC
ACACTTGGCGGGCGCGACCTGGGCATTCCTTACTGCACGCTTTGCGGGGCGGCCCAGGCCTATTTCACCGACGAATTGCC
CGATGGCGTGGACCGCCCGATCCTGCGCACATCGGGCCTGCTGATCCGGTCCAACAAGGTGATGTACGACATCACCACAT
GGTCGGTCTTTGACACATTCACCGGGCGCGCGGTCACGGGCCCGCTGCTGGAGCGCGGCATCCAGCTGGAACAGGCCAGT
GTCATCACCACCGAATGGGGCGCGTGGCGGGAGGCGCATCCGGACACGACCGTGTTGGTCGAAGCCCTCGCCCTGGGACG
CGATTTCGACTTCCGCAACACACGCGACGCCAACGGGCCGATCTTTCCCGTCGGCGACGTGGACCCGCGCCTGGCGGTAC
AGGAAGACGTCATCGGGGTGATCACCGCCTCGGGCCAGCCTGTGGCCTTCCCCCGCGCAACGGCGCTGCTGGCCCTGCGC
AGCGGGGCGGAGGTCGCCGTGGAAAATATCCGGTTGGAGCTGGACGCGGGCGGCATCCGCGCGGTGGATGCGGACGGCAC
CGACCTGGGCAGTCACCAGGCGTTCTGGTTCGCCTGGTCCCAATTTCATCCCGACACGTGGCTGTGGGAGGGCTGA

Upstream 100 bases:

>100_bases
GAAGCACGCGCGCTCACGGGTGTCTCATGCAAATGTTACTCGCCGTGCCGCAGACCCTCCGCCATGGTGAGGGCAAAGCC
AGCTGCCCGAGGGGACCGCC

Downstream 100 bases:

>100_bases
AAACTCTTGCAAGAGTTTTCCCAGGCCCTTTCAAGGGCCTGATCAGGCTTTTGCAAAAGCCTGGGTCGCCGCGGTGAGAC
GGCTGTCACACCAACCCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 451; Mature: 450

Protein sequence:

>451_residues
MTRLLLTALMCIGLSGAVAQAQDQGLPDYIIEEFGTPPAVPDGPLSEDLYAAISDLVTLGTNQRDWDLADRAAFDAVEAA
GDPRVAWIITDMMRFAWRPEFNAVLTETAMALMEVEVQTFRHRAELIDHLMAWDMPAYDNYLDHKRTIFTNFIPGWERIF
VDGDIDWHMVDWGGVLIDDRPYGRSDEVCNCIPAIDNPRVETAAEATWLDDDDIVFGIVLNGEARAYPRRIMEVREMVND
TLGGRDLGIPYCTLCGAAQAYFTDELPDGVDRPILRTSGLLIRSNKVMYDITTWSVFDTFTGRAVTGPLLERGIQLEQAS
VITTEWGAWREAHPDTTVLVEALALGRDFDFRNTRDANGPIFPVGDVDPRLAVQEDVIGVITASGQPVAFPRATALLALR
SGAEVAVENIRLELDAGGIRAVDADGTDLGSHQAFWFAWSQFHPDTWLWEG

Sequences:

>Translated_451_residues
MTRLLLTALMCIGLSGAVAQAQDQGLPDYIIEEFGTPPAVPDGPLSEDLYAAISDLVTLGTNQRDWDLADRAAFDAVEAA
GDPRVAWIITDMMRFAWRPEFNAVLTETAMALMEVEVQTFRHRAELIDHLMAWDMPAYDNYLDHKRTIFTNFIPGWERIF
VDGDIDWHMVDWGGVLIDDRPYGRSDEVCNCIPAIDNPRVETAAEATWLDDDDIVFGIVLNGEARAYPRRIMEVREMVND
TLGGRDLGIPYCTLCGAAQAYFTDELPDGVDRPILRTSGLLIRSNKVMYDITTWSVFDTFTGRAVTGPLLERGIQLEQAS
VITTEWGAWREAHPDTTVLVEALALGRDFDFRNTRDANGPIFPVGDVDPRLAVQEDVIGVITASGQPVAFPRATALLALR
SGAEVAVENIRLELDAGGIRAVDADGTDLGSHQAFWFAWSQFHPDTWLWEG
>Mature_450_residues
TRLLLTALMCIGLSGAVAQAQDQGLPDYIIEEFGTPPAVPDGPLSEDLYAAISDLVTLGTNQRDWDLADRAAFDAVEAAG
DPRVAWIITDMMRFAWRPEFNAVLTETAMALMEVEVQTFRHRAELIDHLMAWDMPAYDNYLDHKRTIFTNFIPGWERIFV
DGDIDWHMVDWGGVLIDDRPYGRSDEVCNCIPAIDNPRVETAAEATWLDDDDIVFGIVLNGEARAYPRRIMEVREMVNDT
LGGRDLGIPYCTLCGAAQAYFTDELPDGVDRPILRTSGLLIRSNKVMYDITTWSVFDTFTGRAVTGPLLERGIQLEQASV
ITTEWGAWREAHPDTTVLVEALALGRDFDFRNTRDANGPIFPVGDVDPRLAVQEDVIGVITASGQPVAFPRATALLALRS
GAEVAVENIRLELDAGGIRAVDADGTDLGSHQAFWFAWSQFHPDTWLWEG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50095; Mature: 49964

Theoretical pI: Translated: 4.09; Mature: 4.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRLLLTALMCIGLSGAVAQAQDQGLPDYIIEEFGTPPAVPDGPLSEDLYAAISDLVTLG
CHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCC
TNQRDWDLADRAAFDAVEAAGDPRVAWIITDMMRFAWRPEFNAVLTETAMALMEVEVQTF
CCCCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
RHRAELIDHLMAWDMPAYDNYLDHKRTIFTNFIPGWERIFVDGDIDWHMVDWGGVLIDDR
HHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHCCCCCEEEEEECCCCEEEEECCCEEECCC
PYGRSDEVCNCIPAIDNPRVETAAEATWLDDDDIVFGIVLNGEARAYPRRIMEVREMVND
CCCCCCCHHHHCCCCCCCCCCCCCCEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHH
TLGGRDLGIPYCTLCGAAQAYFTDELPDGVDRPILRTSGLLIRSNKVMYDITTWSVFDTF
HCCCCCCCCCHHHHHCCHHHHHCCCCCCCCCCCHHHHCCEEEECCEEEEEEEEEEHHHCC
TGRAVTGPLLERGIQLEQASVITTEWGAWREAHPDTTVLVEALALGRDFDFRNTRDANGP
CCCCEECHHHHCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCC
IFPVGDVDPRLAVQEDVIGVITASGQPVAFPRATALLALRSGAEVAVENIRLELDAGGIR
EEECCCCCCCCEECCCEEEEEECCCCCCCCCHHHHHHHHHCCCCEEEEEEEEEEECCCEE
AVDADGTDLGSHQAFWFAWSQFHPDTWLWEG
EECCCCCCCCCCCEEEEEEEHCCCCCCCCCC
>Mature Secondary Structure 
TRLLLTALMCIGLSGAVAQAQDQGLPDYIIEEFGTPPAVPDGPLSEDLYAAISDLVTLG
HHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCC
TNQRDWDLADRAAFDAVEAAGDPRVAWIITDMMRFAWRPEFNAVLTETAMALMEVEVQTF
CCCCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
RHRAELIDHLMAWDMPAYDNYLDHKRTIFTNFIPGWERIFVDGDIDWHMVDWGGVLIDDR
HHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHCCCCCEEEEEECCCCEEEEECCCEEECCC
PYGRSDEVCNCIPAIDNPRVETAAEATWLDDDDIVFGIVLNGEARAYPRRIMEVREMVND
CCCCCCCHHHHCCCCCCCCCCCCCCEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHH
TLGGRDLGIPYCTLCGAAQAYFTDELPDGVDRPILRTSGLLIRSNKVMYDITTWSVFDTF
HCCCCCCCCCHHHHHCCHHHHHCCCCCCCCCCCHHHHCCEEEECCEEEEEEEEEEHHHCC
TGRAVTGPLLERGIQLEQASVITTEWGAWREAHPDTTVLVEALALGRDFDFRNTRDANGP
CCCCEECHHHHCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCC
IFPVGDVDPRLAVQEDVIGVITASGQPVAFPRATALLALRSGAEVAVENIRLELDAGGIR
EEECCCCCCCCEECCCEEEEEECCCCCCCCCHHHHHHHHHCCCCEEEEEEEEEEECCCEE
AVDADGTDLGSHQAFWFAWSQFHPDTWLWEG
EECCCCCCCCCCCEEEEEEEHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA