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The map label for this gene is glxA [H]

Identifier: 89055072

GI number: 89055072

Start: 2590778

End: 2591755

Strand: Direct

Name: glxA [H]

Synonym: Jann_2581

Alternate gene names: 89055072

Gene position: 2590778-2591755 (Clockwise)

Preceding gene: 89055069

Following gene: 89055080

Centisome position: 60.0

GC content: 63.19

Gene sequence:

>978_bases
ATGACCTCTTTTTCTGCCAAGCCGGTTCTGTTTGTCGTGTACCCCAACTGCGTGCTGCTGGACCTTGTCGGGCCGCTTCA
GGTCTTCACCCATGCCCGCGAGACGCCCGACGGAGCCAACGCGTATCAGACCCATGTCGCGTCGAAATCTGGCGGGATGA
TTGGCACGAACACCGTGTTGGATATCGACAGCAGCCCGTTGGAGGAGTGGCGCGACCGTCCCATCCACACCCTGATCATC
GTCGGGGGCGACGGCGTGTATCCTGCGGCGAAGGATGTCCCATTCGTCCGCCAGATCAAGGCCCTGGCCGATCAAGCGCA
GAGAATTTGCTCCGTCTGTTCGGGCGCCATCCTTCTGGCCGCTGCGGGGCTTTTGGACAATCGCCGTGCCGTCACCCATT
GGGAGGATTGCGACCAACTGGCCAAGGGCTACCCGGATGTCCGGGTGGAGGTCGACCCGATCTATATCCGGGACGGCGCG
GTCTGGACCTCCGCCGGGATTACCGCAGGCATCGATATGGCGCTGGCGATCATCGAGGAAGATCTGGGCCACGCAAGCGC
CATCGACATGGCGCGGTCGCTCGTCACGCCCATGGTCCGCTCGGGCGGGCAAAGCCAGTTCAGCGCCGAGTTGGACCGGC
AGGCGCGCGACACGCAGCGGCAATTCGCCCCCCTTCACGCGTGGATCAAAGACAATATCGCGCAGAAGATCTCTGTCGAG
GATATGGCGCAGATCTGCGGTATGAGCGGCCGGACATTCGCGCGGCGATACGCTTTGGCGATGGGGTCTCCGCCCGCGAA
AGCCCTCGAAGCGATCCGCGTGGACCGGGCGCGCGATCTGCTGTCGGGCAGTGACCAGAGCCTGCAAGCCATCGCGATCA
CCTGCGGATTTCTGGATGTGGAACGGATGCGCCGCGCCTTTCTGCGGCAGATCCATACATCCCCGTCCGAGTTCCGCAAA
CAGTTCCAACTGGCCTGA

Upstream 100 bases:

>100_bases
TCACAGCATTCGCAATTTGGTTTCAGGATCAGCATTGGTCTCTCCGGGTCTGTCAAATTTGCCCTAGCTTACGCTCCCTG
CGATTGGCATAAAGGACAAT

Downstream 100 bases:

>100_bases
GCGGCAGCCCTACATCATCTTGAAGACAGACGGATCCGGCCCTGTGCGCAGGCCCATATCCAGCGTCGCGATCTCGGACA
TTTCCGCTTCTGTCAGCGTA

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 324

Protein sequence:

>325_residues
MTSFSAKPVLFVVYPNCVLLDLVGPLQVFTHARETPDGANAYQTHVASKSGGMIGTNTVLDIDSSPLEEWRDRPIHTLII
VGGDGVYPAAKDVPFVRQIKALADQAQRICSVCSGAILLAAAGLLDNRRAVTHWEDCDQLAKGYPDVRVEVDPIYIRDGA
VWTSAGITAGIDMALAIIEEDLGHASAIDMARSLVTPMVRSGGQSQFSAELDRQARDTQRQFAPLHAWIKDNIAQKISVE
DMAQICGMSGRTFARRYALAMGSPPAKALEAIRVDRARDLLSGSDQSLQAIAITCGFLDVERMRRAFLRQIHTSPSEFRK
QFQLA

Sequences:

>Translated_325_residues
MTSFSAKPVLFVVYPNCVLLDLVGPLQVFTHARETPDGANAYQTHVASKSGGMIGTNTVLDIDSSPLEEWRDRPIHTLII
VGGDGVYPAAKDVPFVRQIKALADQAQRICSVCSGAILLAAAGLLDNRRAVTHWEDCDQLAKGYPDVRVEVDPIYIRDGA
VWTSAGITAGIDMALAIIEEDLGHASAIDMARSLVTPMVRSGGQSQFSAELDRQARDTQRQFAPLHAWIKDNIAQKISVE
DMAQICGMSGRTFARRYALAMGSPPAKALEAIRVDRARDLLSGSDQSLQAIAITCGFLDVERMRRAFLRQIHTSPSEFRK
QFQLA
>Mature_324_residues
TSFSAKPVLFVVYPNCVLLDLVGPLQVFTHARETPDGANAYQTHVASKSGGMIGTNTVLDIDSSPLEEWRDRPIHTLIIV
GGDGVYPAAKDVPFVRQIKALADQAQRICSVCSGAILLAAAGLLDNRRAVTHWEDCDQLAKGYPDVRVEVDPIYIRDGAV
WTSAGITAGIDMALAIIEEDLGHASAIDMARSLVTPMVRSGGQSQFSAELDRQARDTQRQFAPLHAWIKDNIAQKISVED
MAQICGMSGRTFARRYALAMGSPPAKALEAIRVDRARDLLSGSDQSLQAIAITCGFLDVERMRRAFLRQIHTSPSEFRKQ
FQLA

Specific function: Positive Activator Of Genes Required For L-Rhamnose Utilization, Probably Of The Rhamnose Transporter Gene (Rhat). [C]

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 35479; Mature: 35348

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSFSAKPVLFVVYPNCVLLDLVGPLQVFTHARETPDGANAYQTHVASKSGGMIGTNTVL
CCCCCCCCEEEEEECCEEEEHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCEEECCEEE
DIDSSPLEEWRDRPIHTLIIVGGDGVYPAAKDVPFVRQIKALADQAQRICSVCSGAILLA
ECCCCHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHH
AAGLLDNRRAVTHWEDCDQLAKGYPDVRVEVDPIYIRDGAVWTSAGITAGIDMALAIIEE
HHHHHCCCCCCCCHHHHHHHHCCCCCCEEEECEEEEECCCEEECCCCHHHHHHHHHHHHH
DLGHASAIDMARSLVTPMVRSGGQSQFSAELDRQARDTQRQFAPLHAWIKDNIAQKISVE
HCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
DMAQICGMSGRTFARRYALAMGSPPAKALEAIRVDRARDLLSGSDQSLQAIAITCGFLDV
HHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHH
ERMRRAFLRQIHTSPSEFRKQFQLA
HHHHHHHHHHHCCCHHHHHHHHCCC
>Mature Secondary Structure 
TSFSAKPVLFVVYPNCVLLDLVGPLQVFTHARETPDGANAYQTHVASKSGGMIGTNTVL
CCCCCCCEEEEEECCEEEEHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCEEECCEEE
DIDSSPLEEWRDRPIHTLIIVGGDGVYPAAKDVPFVRQIKALADQAQRICSVCSGAILLA
ECCCCHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHH
AAGLLDNRRAVTHWEDCDQLAKGYPDVRVEVDPIYIRDGAVWTSAGITAGIDMALAIIEE
HHHHHCCCCCCCCHHHHHHHHCCCCCCEEEECEEEEECCCEEECCCCHHHHHHHHHHHHH
DLGHASAIDMARSLVTPMVRSGGQSQFSAELDRQARDTQRQFAPLHAWIKDNIAQKISVE
HCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
DMAQICGMSGRTFARRYALAMGSPPAKALEAIRVDRARDLLSGSDQSLQAIAITCGFLDV
HHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHH
ERMRRAFLRQIHTSPSEFRKQFQLA
HHHHHHHHHHHCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]