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The map label for this gene is 89055053

Identifier: 89055053

GI number: 89055053

Start: 2564298

End: 2566391

Strand: Direct

Name: 89055053

Synonym: Jann_2562

Alternate gene names: NA

Gene position: 2564298-2566391 (Clockwise)

Preceding gene: 89055046

Following gene: 89055054

Centisome position: 59.39

GC content: 65.95

Gene sequence:

>2094_bases
ATGAAACGACAGGCGACCCCTATGACGGATACCATTGTGGCACGACGCATCAGCACAACACGCTGGCTGAAGGGGCTGCT
TGCGCTTGCGATCACGCTTTTGGCGCTCTGGGGTGCGCGCGATCTGCATGTGGAGGCCGATGTTGTCGGCGCGCTGTCGG
GCAACAGCGAAGGTTATCTGGCCTACGCCGCGTTCCAGGACCGGTTTCAACTGGGGGCTGCCGACGAGGCGCTGCTGGTC
CGGGCGGAAGATCTGGCCGATCCCGCGGCCTTTGAGGCGCTGGAGAACCTGATCCTCGATCTGCAATTCACCGACGGCGT
GGCGGAGGTTGTCAGCCTGTTCTCCCTGCCGGCCGAAGGCTCGACCACGCCCCTGATCCTCGCCAATGAAGACACCCCCC
TCGCGGACAGGTTCGCGGCCTTCGCGGCAGCCGGTCCCGCCGCCGGTGCGCTGGTCACGGAAGGGCGCGATGCGGCGCTG
TTGCATGTCATCGCGGTGACGGATGCCGCGCCCGGTGATATCGCAACCGCCCTGCCCCCGTTGATTGAAGCCGCAGCCCC
CCTTTCCGTCGCCCCGGTCGGTCAGGCGGAGGTGGAGCGTCAGATCTCCAGCAACCTGATCCTTGATCAGACGCTGGTGA
CACCCGTCGCGGTCCTGATCTGCATCATCGTCGGCGCGCTGATCCTGCGGTCGATCCGGGCCGTGTTGGTCTGTGCGGCC
CCGGCGATATGCGGCGTGTTGTGGTTCATGGGCCTGCTGGGATGGGCCGGTGAGGCGTTGGATCCGTGGCTGTCGACCCT
GCCGATGCTGGTGATGGTTCTGGCCTTCGCCGACACGCTGCACCTGTTTTATGCCAGTCGAGAGGAAGGTGGCCTCGACA
AAGCGGTCCATAACGTGATGCCCGCCGCCTTCATGACCTCGCTGACCTCGGCGCTGGCGCTTGCGAGCTTCGGGTTTGCG
GGCAGCGACTCGCTCTGGGGTCTGGCCGTCTGGGGACCTGCGGCGGTCTTCAGCGGGTTTGCGGCGGTCTATCTTCTGTT
CCCGCTGCTCAGCCGCCTGATCATCCGCAAGGAAATCAACCACCCCGCCGGGTTTTCCTACGTCATGGGACCCGCCCAAA
GCGGCCTTCGGCACCCGCGCACCATGGCCGTGGTGGCCGTGGTCGTGGTGATCGGCCTGATCCCCGGGGTGAACAGCACG
GACCCTGATTTCTCCATCTCCGAGCATATTCGCGATGACGCCCCTCTGGGCCGCGATCTGACATTCATGGAGGAGGAAGG
GCTGGGAAGCGCCAGCCTGTTTGTCGTGATCGACGACACCGATGGGGATCCGGGCCTGTCGCCCGCGGATGGGGATCGGA
TCGCCACGGTCGCATCCCTTGCGATCAGCGGGCCGGGGACGACATCGGACGACGCGACACCGGCAGTGCCGGAGCGGTTC
CGCGCCGAGGATGGGCTGGCCGTGGCCCTGCCCGTTCTGGTGCCCCTGGGCAATGGCCCGGAGCGGTTCGAGGCAGAGCT
GGACCGGCTGCGCGCAGGCATTGAGGAGGCCGGCCTGTCCGATGTGGCGCGGCTGGAGGGGCAATCGCTGCTGGCCCATG
AAGTCGTGCCCGAAACGGTGGATGCGATGCGGTCGTCGTTCTACATCGCCCTCGCCGCGATTTCGCTGGTGGTGGCTCTG
TCCCAACGCTCCATCGCCCTGGCGCTGTTGGCCACCGCGATCAGCGCGCTTCCGATGATGGCCATCGAGGGGGTGCTGTA
TCTGTCGGGGCGCGGCATGACGATGACGGCGGCCATCGCCCTGACCGTTGCCTTCGGCATCGCAGTGGACAACACGATCC
ACTATCTCAACCGCTGGCGACGCTCCAACGGGCCGAAGGGCACGCGCCTCGGCGAAGCCCTTGGGCACGCAGGCCCGCCC
ATGGTCGCCTCCACCCTCATCATGACACTCGGTTTCGGCGCAACCTTGCTGAGCGCGACCGCCTCCATGCCGCAGTTTGG
CGTTTTTGTGATCTCGGCGTTATGGATGGCCCTGATCGCGGCCCTATGGTTCCTCCCAGCCCTGATCCGCCTGGTCAGAC
GAAAGGAAATCTGA

Upstream 100 bases:

>100_bases
CGTCAATGGTCGCTACACATCGTCACTTGAACATTGCGCCCTATATTCGGGCAACGATCAAGGCGTAGGCAAAGAGACGA
GCACCTTCCATGGTGCCAGA

Downstream 100 bases:

>100_bases
TGCGACCCATTTTGATGCTACTGGCGGCCCTTGCCGCGCCCCTGCCCCTTGCGGCCCCCGCCAATGCCGATATCCCCGGC
TGGCTGTCCGGCGAGTGGCG

Product: RND efflux transporter

Products: NA

Alternate protein names: Membrane Transporter; RND Efflux Transporter

Number of amino acids: Translated: 697; Mature: 697

Protein sequence:

>697_residues
MKRQATPMTDTIVARRISTTRWLKGLLALAITLLALWGARDLHVEADVVGALSGNSEGYLAYAAFQDRFQLGAADEALLV
RAEDLADPAAFEALENLILDLQFTDGVAEVVSLFSLPAEGSTTPLILANEDTPLADRFAAFAAAGPAAGALVTEGRDAAL
LHVIAVTDAAPGDIATALPPLIEAAAPLSVAPVGQAEVERQISSNLILDQTLVTPVAVLICIIVGALILRSIRAVLVCAA
PAICGVLWFMGLLGWAGEALDPWLSTLPMLVMVLAFADTLHLFYASREEGGLDKAVHNVMPAAFMTSLTSALALASFGFA
GSDSLWGLAVWGPAAVFSGFAAVYLLFPLLSRLIIRKEINHPAGFSYVMGPAQSGLRHPRTMAVVAVVVVIGLIPGVNST
DPDFSISEHIRDDAPLGRDLTFMEEEGLGSASLFVVIDDTDGDPGLSPADGDRIATVASLAISGPGTTSDDATPAVPERF
RAEDGLAVALPVLVPLGNGPERFEAELDRLRAGIEEAGLSDVARLEGQSLLAHEVVPETVDAMRSSFYIALAAISLVVAL
SQRSIALALLATAISALPMMAIEGVLYLSGRGMTMTAAIALTVAFGIAVDNTIHYLNRWRRSNGPKGTRLGEALGHAGPP
MVASTLIMTLGFGATLLSATASMPQFGVFVISALWMALIAALWFLPALIRLVRRKEI

Sequences:

>Translated_697_residues
MKRQATPMTDTIVARRISTTRWLKGLLALAITLLALWGARDLHVEADVVGALSGNSEGYLAYAAFQDRFQLGAADEALLV
RAEDLADPAAFEALENLILDLQFTDGVAEVVSLFSLPAEGSTTPLILANEDTPLADRFAAFAAAGPAAGALVTEGRDAAL
LHVIAVTDAAPGDIATALPPLIEAAAPLSVAPVGQAEVERQISSNLILDQTLVTPVAVLICIIVGALILRSIRAVLVCAA
PAICGVLWFMGLLGWAGEALDPWLSTLPMLVMVLAFADTLHLFYASREEGGLDKAVHNVMPAAFMTSLTSALALASFGFA
GSDSLWGLAVWGPAAVFSGFAAVYLLFPLLSRLIIRKEINHPAGFSYVMGPAQSGLRHPRTMAVVAVVVVIGLIPGVNST
DPDFSISEHIRDDAPLGRDLTFMEEEGLGSASLFVVIDDTDGDPGLSPADGDRIATVASLAISGPGTTSDDATPAVPERF
RAEDGLAVALPVLVPLGNGPERFEAELDRLRAGIEEAGLSDVARLEGQSLLAHEVVPETVDAMRSSFYIALAAISLVVAL
SQRSIALALLATAISALPMMAIEGVLYLSGRGMTMTAAIALTVAFGIAVDNTIHYLNRWRRSNGPKGTRLGEALGHAGPP
MVASTLIMTLGFGATLLSATASMPQFGVFVISALWMALIAALWFLPALIRLVRRKEI
>Mature_697_residues
MKRQATPMTDTIVARRISTTRWLKGLLALAITLLALWGARDLHVEADVVGALSGNSEGYLAYAAFQDRFQLGAADEALLV
RAEDLADPAAFEALENLILDLQFTDGVAEVVSLFSLPAEGSTTPLILANEDTPLADRFAAFAAAGPAAGALVTEGRDAAL
LHVIAVTDAAPGDIATALPPLIEAAAPLSVAPVGQAEVERQISSNLILDQTLVTPVAVLICIIVGALILRSIRAVLVCAA
PAICGVLWFMGLLGWAGEALDPWLSTLPMLVMVLAFADTLHLFYASREEGGLDKAVHNVMPAAFMTSLTSALALASFGFA
GSDSLWGLAVWGPAAVFSGFAAVYLLFPLLSRLIIRKEINHPAGFSYVMGPAQSGLRHPRTMAVVAVVVVIGLIPGVNST
DPDFSISEHIRDDAPLGRDLTFMEEEGLGSASLFVVIDDTDGDPGLSPADGDRIATVASLAISGPGTTSDDATPAVPERF
RAEDGLAVALPVLVPLGNGPERFEAELDRLRAGIEEAGLSDVARLEGQSLLAHEVVPETVDAMRSSFYIALAAISLVVAL
SQRSIALALLATAISALPMMAIEGVLYLSGRGMTMTAAIALTVAFGIAVDNTIHYLNRWRRSNGPKGTRLGEALGHAGPP
MVASTLIMTLGFGATLLSATASMPQFGVFVISALWMALIAALWFLPALIRLVRRKEI

Specific function: Unknown

COG id: COG1033

COG function: function code R; Predicted exporters of the RND superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 73041; Mature: 73041

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: PS50156 SSD ; PS00201 FLAVODOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRQATPMTDTIVARRISTTRWLKGLLALAITLLALWGARDLHVEADVVGALSGNSEGYL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHEEEEECCCCCCEE
AYAAFQDRFQLGAADEALLVRAEDLADPAAFEALENLILDLQFTDGVAEVVSLFSLPAEG
EEEEHHHHHHCCCCCHHHEEEHHHHCCHHHHHHHHHHHEEEEECCCHHHHHHHHCCCCCC
STTPLILANEDTPLADRFAAFAAAGPAAGALVTEGRDAALLHVIAVTDAAPGDIATALPP
CCCEEEEECCCCCHHHHHHHHHHCCCCCCCEEECCCCCEEEEEEEECCCCCCCHHHHHHH
LIEAAAPLSVAPVGQAEVERQISSNLILDQTLVTPVAVLICIIVGALILRSIRAVLVCAA
HHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PAICGVLWFMGLLGWAGEALDPWLSTLPMLVMVLAFADTLHLFYASREEGGLDKAVHNVM
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
PAAFMTSLTSALALASFGFAGSDSLWGLAVWGPAAVFSGFAAVYLLFPLLSRLIIRKEIN
HHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
HPAGFSYVMGPAQSGLRHPRTMAVVAVVVVIGLIPGVNSTDPDFSISEHIRDDAPLGRDL
CCCCCHHEECCHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCC
TFMEEEGLGSASLFVVIDDTDGDPGLSPADGDRIATVASLAISGPGTTSDDATPAVPERF
EEEHHCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHH
RAEDGLAVALPVLVPLGNGPERFEAELDRLRAGIEEAGLSDVARLEGQSLLAHEVVPETV
CCCCCCEEEEEHEEECCCCHHHHHHHHHHHHHCHHHCCHHHHHHHCCCHHHHHHHHHHHH
DAMRSSFYIALAAISLVVALSQRSIALALLATAISALPMMAIEGVLYLSGRGMTMTAAIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHH
LTVAFGIAVDNTIHYLNRWRRSNGPKGTRLGEALGHAGPPMVASTLIMTLGFGATLLSAT
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHH
ASMPQFGVFVISALWMALIAALWFLPALIRLVRRKEI
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKRQATPMTDTIVARRISTTRWLKGLLALAITLLALWGARDLHVEADVVGALSGNSEGYL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHEEEEECCCCCCEE
AYAAFQDRFQLGAADEALLVRAEDLADPAAFEALENLILDLQFTDGVAEVVSLFSLPAEG
EEEEHHHHHHCCCCCHHHEEEHHHHCCHHHHHHHHHHHEEEEECCCHHHHHHHHCCCCCC
STTPLILANEDTPLADRFAAFAAAGPAAGALVTEGRDAALLHVIAVTDAAPGDIATALPP
CCCEEEEECCCCCHHHHHHHHHHCCCCCCCEEECCCCCEEEEEEEECCCCCCCHHHHHHH
LIEAAAPLSVAPVGQAEVERQISSNLILDQTLVTPVAVLICIIVGALILRSIRAVLVCAA
HHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PAICGVLWFMGLLGWAGEALDPWLSTLPMLVMVLAFADTLHLFYASREEGGLDKAVHNVM
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
PAAFMTSLTSALALASFGFAGSDSLWGLAVWGPAAVFSGFAAVYLLFPLLSRLIIRKEIN
HHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
HPAGFSYVMGPAQSGLRHPRTMAVVAVVVVIGLIPGVNSTDPDFSISEHIRDDAPLGRDL
CCCCCHHEECCHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCC
TFMEEEGLGSASLFVVIDDTDGDPGLSPADGDRIATVASLAISGPGTTSDDATPAVPERF
EEEHHCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHH
RAEDGLAVALPVLVPLGNGPERFEAELDRLRAGIEEAGLSDVARLEGQSLLAHEVVPETV
CCCCCCEEEEEHEEECCCCHHHHHHHHHHHHHCHHHCCHHHHHHHCCCHHHHHHHHHHHH
DAMRSSFYIALAAISLVVALSQRSIALALLATAISALPMMAIEGVLYLSGRGMTMTAAIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHH
LTVAFGIAVDNTIHYLNRWRRSNGPKGTRLGEALGHAGPPMVASTLIMTLGFGATLLSAT
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHH
ASMPQFGVFVISALWMALIAALWFLPALIRLVRRKEI
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA