Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89055046

Identifier: 89055046

GI number: 89055046

Start: 2556198

End: 2556824

Strand: Direct

Name: 89055046

Synonym: Jann_2555

Alternate gene names: NA

Gene position: 2556198-2556824 (Clockwise)

Preceding gene: 89055044

Following gene: 89055053

Centisome position: 59.2

GC content: 60.77

Gene sequence:

>627_bases
ATGCACAAGCTGGATGAAGATTTGGTTGAACTCGGCATGGATGCACCGAAATCGGGGCGTATTCTGCTTCTGGCCTGCGG
GGCGCTGGCCCATGAGGTCCTGGCCCTCACGCGCCTAAACGGTTGGGATCATTTGGGTTTACACTGCCTGCCGGCCAAAT
TGCACAACACACCGGACCAGATCCCCGACGCGGTGGAGGCGGCGGTGCGGGCGCGCAGGGCGGATTTTGAGCAAGTGTTC
GTTCTCTACGCCGATTGCGGAACGGGTGGATTGTTACAGGCGCGCTGCGCGGAACTGGGGGTCGAGATGCTGGAAGGCCC
CCATTGCTATTCCTTCTTTGAGGGGAATCAGGCGTTCGAGGCGCGCGGGGAGATGACGTGTTTCTACCTCACCGACTTTC
TGGTGAAGCAGTTTGATGCCTTCGTGACGAAACCCCTGGGGTTGGATCGGTATCCAGAGCTGCGGGACATGTATTTCGGT
AACTACACCACGCTGGTCTATCAGGCCCAGGTCGATGACCCGGCACTGACGGAACGGGCGCGGGTCTATGCAGAGCGGCT
GGGGCTGGCGTTTGAGCGGCGGTTTACGGGGTATGGCGATCTGGAGACGGCGCTGGCGCGCCTGTAG

Upstream 100 bases:

>100_bases
TGAGGTTGTGTCGTGTCTTGACCGGGGTGACCCTCGCGGGGATCCGACCTCCGCTCAAGTGACGGGTCTGTGAGCGCACG
GGCGTGTGAAAGGTGTTTCA

Downstream 100 bases:

>100_bases
CGTCCCCGCTCCTCCAGGCCTCCGGCCTGTCCTCGCCGCCTAAATCAGAGGGATGGCGTCACGCACCAGCGGGGCCAGAT
CACTATCGTCCCGGGCGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MHKLDEDLVELGMDAPKSGRILLLACGALAHEVLALTRLNGWDHLGLHCLPAKLHNTPDQIPDAVEAAVRARRADFEQVF
VLYADCGTGGLLQARCAELGVEMLEGPHCYSFFEGNQAFEARGEMTCFYLTDFLVKQFDAFVTKPLGLDRYPELRDMYFG
NYTTLVYQAQVDDPALTERARVYAERLGLAFERRFTGYGDLETALARL

Sequences:

>Translated_208_residues
MHKLDEDLVELGMDAPKSGRILLLACGALAHEVLALTRLNGWDHLGLHCLPAKLHNTPDQIPDAVEAAVRARRADFEQVF
VLYADCGTGGLLQARCAELGVEMLEGPHCYSFFEGNQAFEARGEMTCFYLTDFLVKQFDAFVTKPLGLDRYPELRDMYFG
NYTTLVYQAQVDDPALTERARVYAERLGLAFERRFTGYGDLETALARL
>Mature_208_residues
MHKLDEDLVELGMDAPKSGRILLLACGALAHEVLALTRLNGWDHLGLHCLPAKLHNTPDQIPDAVEAAVRARRADFEQVF
VLYADCGTGGLLQARCAELGVEMLEGPHCYSFFEGNQAFEARGEMTCFYLTDFLVKQFDAFVTKPLGLDRYPELRDMYFG
NYTTLVYQAQVDDPALTERARVYAERLGLAFERRFTGYGDLETALARL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23329; Mature: 23329

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHKLDEDLVELGMDAPKSGRILLLACGALAHEVLALTRLNGWDHLGLHCLPAKLHNTPDQ
CCCCHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHHHCCCCCCCCCEEECHHHCCCHHC
IPDAVEAAVRARRADFEQVFVLYADCGTGGLLQARCAELGVEMLEGPHCYSFFEGNQAFE
CHHHHHHHHHHHHCCHHEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEHHCCCCHHH
ARGEMTCFYLTDFLVKQFDAFVTKPLGLDRYPELRDMYFGNYTTLVYQAQVDDPALTERA
CCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCEEEEEEEEECCCHHHHHHH
RVYAERLGLAFERRFTGYGDLETALARL
HHHHHHHHHHHHHHCCCCCHHHHHHHCC
>Mature Secondary Structure
MHKLDEDLVELGMDAPKSGRILLLACGALAHEVLALTRLNGWDHLGLHCLPAKLHNTPDQ
CCCCHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHHHCCCCCCCCCEEECHHHCCCHHC
IPDAVEAAVRARRADFEQVFVLYADCGTGGLLQARCAELGVEMLEGPHCYSFFEGNQAFE
CHHHHHHHHHHHHCCHHEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEHHCCCCHHH
ARGEMTCFYLTDFLVKQFDAFVTKPLGLDRYPELRDMYFGNYTTLVYQAQVDDPALTERA
CCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCEEEEEEEEECCCHHHHHHH
RVYAERLGLAFERRFTGYGDLETALARL
HHHHHHHHHHHHHHCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA