| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89055029
Identifier: 89055029
GI number: 89055029
Start: 2539808
End: 2540560
Strand: Direct
Name: 89055029
Synonym: Jann_2538
Alternate gene names: NA
Gene position: 2539808-2540560 (Clockwise)
Preceding gene: 89055026
Following gene: 89055037
Centisome position: 58.82
GC content: 63.35
Gene sequence:
>753_bases ATGAAACGATTGATGACAAGTGTGGCGGCATTGGCCCTGTTGGCGACGCCGCTGGCCGCGACCGAGATTGGCGATATGAC CGCCGCTGAACGGCAGGCCTTCCGGGCCGAAGTGCGCCAGTATCTGCTGGAGAACCCCGAGGTTCTGATGGAGGCGATTG CCGTTCTGGAGGAACGCCAGGCCGCCGAAGAAGCCGCCGCGCAGGAACTGGCCGTGGTGGAGAACGCGCCCGCGCTGTTC AATTCGGCCTTCGACCATGTGGGCGGCAACCCCGAGGGCGATGTCGTGATCGTCGAGTTTGTCGACTATCGATGCAGCTT CTGCCGCCGCGCGCACCCGGAGGTGACGGAACTGGTGGAGGCCGATGGCAACATCCGCATCATCACCAAGGAATTCCCGA TCCTGGGCGAGCAATCCACGCTGGCCTCGCGCTTCGCGATTGCCACGAACCTGTCGCTGGGAGGCGAGGCTTATGAACAG GTAAGCGACGGTCTGATGGCGCTCCGCTCGGACGTGACCGAGTTGGCGCTGGCGCGTCTGGCGGGTGATCTGGGGCTCGA CAGCGAGGTGATCTTTGAGGCGATGGACGACCCGAGGGTGCAGGCAACGATTGATGCCAACCGCAATCTCGGCCAGCGGA TGGGGATCACCGGCACGCCGTCATTCGTGTTCGGTGACCAATTGGTGCAGGGCTATGTGCCGCTGCCCAACATGATGGAT ATCGTGTCGATCATCCGGGACACCGCCGGCTGA
Upstream 100 bases:
>100_bases GAAGTCACGAAAGTGTGAGACCATTGACGCGCGCATTCGTCAATGGCGGCGGGCGCGGGATGTGATAGACGGGGGCAAGA GCGATTGAGCGGAGGCTTTG
Downstream 100 bases:
>100_bases ACCCGTCGCCGCATTTGATGCGAAAAGGGCGCCCGGTGAGGCGCCCTTTTTTGTTTGAATGGACCGTGAACTCAGCCCCG CGACCACCATCCGCGCCGTT
Product: DSBA oxidoreductase
Products: NA
Alternate protein names: Outer Membrane Protein; Dsba Oxidoreductase; ThiolDisulfide Interchange Protein DsbA; Twin-Arginine Translocation Pathway Signal; Thioredoxin Domain Protein; 27 KDa Outer Membrane Protein; DSBA-Like Thioredoxin Domain Protein; DsbA Oxidoreductase; 27kDa Outer Membrane Protein; Disulfide Bond Formation Protein D; Disulfide Oxidoreductase; Protein-Disulfide Isomerase; ThiolDisulfide Oxidoreductase; DSBA-Like Thioredoxin Domain-Containing Protein; Suppressor For Copper-Sensitivity C; Oxidoreductase; DSBA Family Oxidoreductase; Thioredoxin Domain-Containing Protein; BcfH Protein; Metal Resistance Protein; Disulfide Bonded Thioredoxin Protein; Fis Family Transcriptional Regulator
Number of amino acids: Translated: 250; Mature: 250
Protein sequence:
>250_residues MKRLMTSVAALALLATPLAATEIGDMTAAERQAFRAEVRQYLLENPEVLMEAIAVLEERQAAEEAAAQELAVVENAPALF NSAFDHVGGNPEGDVVIVEFVDYRCSFCRRAHPEVTELVEADGNIRIITKEFPILGEQSTLASRFAIATNLSLGGEAYEQ VSDGLMALRSDVTELALARLAGDLGLDSEVIFEAMDDPRVQATIDANRNLGQRMGITGTPSFVFGDQLVQGYVPLPNMMD IVSIIRDTAG
Sequences:
>Translated_250_residues MKRLMTSVAALALLATPLAATEIGDMTAAERQAFRAEVRQYLLENPEVLMEAIAVLEERQAAEEAAAQELAVVENAPALF NSAFDHVGGNPEGDVVIVEFVDYRCSFCRRAHPEVTELVEADGNIRIITKEFPILGEQSTLASRFAIATNLSLGGEAYEQ VSDGLMALRSDVTELALARLAGDLGLDSEVIFEAMDDPRVQATIDANRNLGQRMGITGTPSFVFGDQLVQGYVPLPNMMD IVSIIRDTAG >Mature_250_residues MKRLMTSVAALALLATPLAATEIGDMTAAERQAFRAEVRQYLLENPEVLMEAIAVLEERQAAEEAAAQELAVVENAPALF NSAFDHVGGNPEGDVVIVEFVDYRCSFCRRAHPEVTELVEADGNIRIITKEFPILGEQSTLASRFAIATNLSLGGEAYEQ VSDGLMALRSDVTELALARLAGDLGLDSEVIFEAMDDPRVQATIDANRNLGQRMGITGTPSFVFGDQLVQGYVPLPNMMD IVSIIRDTAG
Specific function: Unknown
COG id: COG1651
COG function: function code O; Protein-disulfide isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27002; Mature: 27002
Theoretical pI: Translated: 4.06; Mature: 4.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLMTSVAALALLATPLAATEIGDMTAAERQAFRAEVRQYLLENPEVLMEAIAVLEERQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH AAEEAAAQELAVVENAPALFNSAFDHVGGNPEGDVVIVEFVDYRCSFCRRAHPEVTELVE HHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHCCCHHHHHHH ADGNIRIITKEFPILGEQSTLASRFAIATNLSLGGEAYEQVSDGLMALRSDVTELALARL CCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AGDLGLDSEVIFEAMDDPRVQATIDANRNLGQRMGITGTPSFVFGDQLVQGYVPLPNMMD HHHCCCCHHHHHHHCCCCCEEEEECCCCCCHHHCCCCCCCCHHHHHHHHHCCCCCCHHHH IVSIIRDTAG HHHHHHHCCC >Mature Secondary Structure MKRLMTSVAALALLATPLAATEIGDMTAAERQAFRAEVRQYLLENPEVLMEAIAVLEERQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH AAEEAAAQELAVVENAPALFNSAFDHVGGNPEGDVVIVEFVDYRCSFCRRAHPEVTELVE HHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHCCCHHHHHHH ADGNIRIITKEFPILGEQSTLASRFAIATNLSLGGEAYEQVSDGLMALRSDVTELALARL CCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AGDLGLDSEVIFEAMDDPRVQATIDANRNLGQRMGITGTPSFVFGDQLVQGYVPLPNMMD HHHCCCCHHHHHHHCCCCCEEEEECCCCCCHHHCCCCCCCCHHHHHHHHHCCCCCCHHHH IVSIIRDTAG HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA