| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
Click here to switch to the map view.
The map label for this gene is 89055026
Identifier: 89055026
GI number: 89055026
Start: 2536694
End: 2537296
Strand: Direct
Name: 89055026
Synonym: Jann_2535
Alternate gene names: NA
Gene position: 2536694-2537296 (Clockwise)
Preceding gene: 89055021
Following gene: 89055029
Centisome position: 58.75
GC content: 65.34
Gene sequence:
>603_bases ATGGGACCTGAAGACATCTTGCCGGCCTATGCGGTTGAGGCCGCCCATTGGGCCCGTCAGCGCAATCTCGATCTGTGGGA GCGTCCGGCGCTGGAGGCCTGCGTGGCAGACCGTGCCCCCGGGCTGCGTGTTCTTGATCTGGGATGCGGGTCCGGACAGC CCATTGCGCAGTGGTTCGTGGCACGGGGTGACGTCGTATGCGGGGTCGACGGCGTGGCCGAAATGCTGGCTGAATGCGCC CGCCGGGTGCCCGAGGTGGCGCGGGTCCACGCCGATATGCGCAGGTTGGCACTGGGTCGTCAGTTCGACATCATCCTGGC GTTCAACAGTTTTTTCCACCTGACCCCGGATGATCAGCGCGCCATGTTCCCGGTCTTCAGGGCCCATGCCGCCCCCGACG CGCGATTGCTCTTTACCTCAGGCCCCAGCGCCGGGGAGGCTGTGGGACAGGTCGGTACCAGCCCCGTCTACCACGCGAGC CTTGACCCCGATGAATACCGCAACCTTCTGGCCACCCATGGGTTTGAACTCGTCTGGTTTCGCCCCGAAGATGCGGAATT GCGCGGCCACAGCGTCTGGCTCGCGCGGTTTACTGACGCCTGA
Upstream 100 bases:
>100_bases ATCCCCATATTCTTGGGTGTGCTTATACGCCGGGCGCGGGTCTGGGTCAAAAGCAACTGGGCGGGTTTTTGCCGCGATTT TGTTACGTTACGGTGATGTG
Downstream 100 bases:
>100_bases GCGCCGCCGCAGCGGCATCATCCTGCGACCAAGACAACACCGCATCGGTAATGGCCGCCTGCATCTGCGCCCGCCACTCC GGGTTCTGAATGTTCTCCAG
Product: type 12 methyltransferase
Products: NA
Alternate protein names: Methyltransferase; Methyltransferase Domain-Containing
Number of amino acids: Translated: 200; Mature: 199
Protein sequence:
>200_residues MGPEDILPAYAVEAAHWARQRNLDLWERPALEACVADRAPGLRVLDLGCGSGQPIAQWFVARGDVVCGVDGVAEMLAECA RRVPEVARVHADMRRLALGRQFDIILAFNSFFHLTPDDQRAMFPVFRAHAAPDARLLFTSGPSAGEAVGQVGTSPVYHAS LDPDEYRNLLATHGFELVWFRPEDAELRGHSVWLARFTDA
Sequences:
>Translated_200_residues MGPEDILPAYAVEAAHWARQRNLDLWERPALEACVADRAPGLRVLDLGCGSGQPIAQWFVARGDVVCGVDGVAEMLAECA RRVPEVARVHADMRRLALGRQFDIILAFNSFFHLTPDDQRAMFPVFRAHAAPDARLLFTSGPSAGEAVGQVGTSPVYHAS LDPDEYRNLLATHGFELVWFRPEDAELRGHSVWLARFTDA >Mature_199_residues GPEDILPAYAVEAAHWARQRNLDLWERPALEACVADRAPGLRVLDLGCGSGQPIAQWFVARGDVVCGVDGVAEMLAECAR RVPEVARVHADMRRLALGRQFDIILAFNSFFHLTPDDQRAMFPVFRAHAAPDARLLFTSGPSAGEAVGQVGTSPVYHASL DPDEYRNLLATHGFELVWFRPEDAELRGHSVWLARFTDA
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22076; Mature: 21945
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGPEDILPAYAVEAAHWARQRNLDLWERPALEACVADRAPGLRVLDLGCGSGQPIAQWFV CCCHHHCHHHHHHHHHHHHHCCCCCHHCHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHH ARGDVVCGVDGVAEMLAECARRVPEVARVHADMRRLALGRQFDIILAFNSFFHLTPDDQR HCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEECCCCCCH AMFPVFRAHAAPDARLLFTSGPSAGEAVGQVGTSPVYHASLDPDEYRNLLATHGFELVWF HHHHHHHHCCCCCCEEEEECCCCHHHHHHHCCCCCEEECCCCHHHHHHHHHHCCEEEEEE RPEDAELRGHSVWLARFTDA CCCCCCCCCCEEEEEEECCC >Mature Secondary Structure GPEDILPAYAVEAAHWARQRNLDLWERPALEACVADRAPGLRVLDLGCGSGQPIAQWFV CCHHHCHHHHHHHHHHHHHCCCCCHHCHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHH ARGDVVCGVDGVAEMLAECARRVPEVARVHADMRRLALGRQFDIILAFNSFFHLTPDDQR HCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEECCCCCCH AMFPVFRAHAAPDARLLFTSGPSAGEAVGQVGTSPVYHASLDPDEYRNLLATHGFELVWF HHHHHHHHCCCCCCEEEEECCCCHHHHHHHCCCCCEEECCCCHHHHHHHHHHCCEEEEEE RPEDAELRGHSVWLARFTDA CCCCCCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA