| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89055015
Identifier: 89055015
GI number: 89055015
Start: 2524061
End: 2524747
Strand: Direct
Name: 89055015
Synonym: Jann_2524
Alternate gene names: NA
Gene position: 2524061-2524747 (Clockwise)
Preceding gene: 89055014
Following gene: 89055016
Centisome position: 58.45
GC content: 64.05
Gene sequence:
>687_bases ATGGCAGCCTATACCTTTGCCGCATTGTTTCTTGCCCATGTCATCGCGGACTACGTGCTGCAAACCACGTGGATGGTCGT CAACAAAAAGCGCCCCATCGCCATGGCCGCCCATATCGGGCTTGTCCTCGGGACGATGTGCGCCACAACGCTGACGCTGA ACCCGTGGTTTCTGGCATTGGCCGCGCTGCATCTGTGGATCGACATCATCAAGACCTATGCCATGCCCGAGGGTCTGGGC GCTTACGTGGCCGACCAAGTGCTCCACGTCGCCTCCATTGCCGGGATCGCGCTGCTGGCCCCGCAGATCTGGCCGATGAG CCCGCTGGCCGATGTCGATAACCTGCCGCTTTATTACATGATCATCGGTGGCGTGCTGTTTGCGGCGCGCGGCGGACAAT ATGCGGTGGCGATGCTGGTCAGCGCGCGTGGCACGGGCTCGGGTCACGGGGTCGTGCTGGGATGGGCCGAGCGTGCGGCG CTGTGTGTGGTGCTGATCGGCGGCTGGCAGATCTGGCCCCTTCTTCTGGTGGCCGTGATCGCCGTGAAGGGCCTCTATAT GGGCGTCAGCTTTGCGCGCCGTGACACGGGCGGTCGCGCGCGCCTGCTTCTTGGGTCTGGTATCAGTCTGGCCTGGGGCC TTGCGGTCGCCGTGCCGCTGGCCCTCGTGATGCCGATGATGCAGTGA
Upstream 100 bases:
>100_bases GTGTCTTTGGGAACATTGAGGGAGAGGACGGTGTGTCTTGCGCCGTCAACGGGGCCGCGCCGCGCGTGTCGCCCCTTGGA AACGGGACCAGACACCACCC
Downstream 100 bases:
>100_bases TGCCTGAGCGTTCTACTCAGGCTTGAGAAACGCGGGCCTGGCGCTTACATTGCACATCAGCAGTTACAGGAAGGCGCAGC GCCATGTTCGGTATCCCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 228; Mature: 227
Protein sequence:
>228_residues MAAYTFAALFLAHVIADYVLQTTWMVVNKKRPIAMAAHIGLVLGTMCATTLTLNPWFLALAALHLWIDIIKTYAMPEGLG AYVADQVLHVASIAGIALLAPQIWPMSPLADVDNLPLYYMIIGGVLFAARGGQYAVAMLVSARGTGSGHGVVLGWAERAA LCVVLIGGWQIWPLLLVAVIAVKGLYMGVSFARRDTGGRARLLLGSGISLAWGLAVAVPLALVMPMMQ
Sequences:
>Translated_228_residues MAAYTFAALFLAHVIADYVLQTTWMVVNKKRPIAMAAHIGLVLGTMCATTLTLNPWFLALAALHLWIDIIKTYAMPEGLG AYVADQVLHVASIAGIALLAPQIWPMSPLADVDNLPLYYMIIGGVLFAARGGQYAVAMLVSARGTGSGHGVVLGWAERAA LCVVLIGGWQIWPLLLVAVIAVKGLYMGVSFARRDTGGRARLLLGSGISLAWGLAVAVPLALVMPMMQ >Mature_227_residues AAYTFAALFLAHVIADYVLQTTWMVVNKKRPIAMAAHIGLVLGTMCATTLTLNPWFLALAALHLWIDIIKTYAMPEGLGA YVADQVLHVASIAGIALLAPQIWPMSPLADVDNLPLYYMIIGGVLFAARGGQYAVAMLVSARGTGSGHGVVLGWAERAAL CVVLIGGWQIWPLLLVAVIAVKGLYMGVSFARRDTGGRARLLLGSGISLAWGLAVAVPLALVMPMMQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24196; Mature: 24065
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAYTFAALFLAHVIADYVLQTTWMVVNKKRPIAMAAHIGLVLGTMCATTLTLNPWFLAL CCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHH AALHLWIDIIKTYAMPEGLGAYVADQVLHVASIAGIALLAPQIWPMSPLADVDNLPLYYM HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHH IIGGVLFAARGGQYAVAMLVSARGTGSGHGVVLGWAERAALCVVLIGGWQIWPLLLVAVI HHHHHHHHCCCCCEEEEEEEECCCCCCCCEEEEECHHHHEEEEEEECCHHHHHHHHHHHH AVKGLYMGVSFARRDTGGRARLLLGSGISLAWGLAVAVPLALVMPMMQ HHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AAYTFAALFLAHVIADYVLQTTWMVVNKKRPIAMAAHIGLVLGTMCATTLTLNPWFLAL CHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHH AALHLWIDIIKTYAMPEGLGAYVADQVLHVASIAGIALLAPQIWPMSPLADVDNLPLYYM HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHH IIGGVLFAARGGQYAVAMLVSARGTGSGHGVVLGWAERAALCVVLIGGWQIWPLLLVAVI HHHHHHHHCCCCCEEEEEEEECCCCCCCCEEEEECHHHHEEEEEEECCHHHHHHHHHHHH AVKGLYMGVSFARRDTGGRARLLLGSGISLAWGLAVAVPLALVMPMMQ HHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA