| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is yitW [H]
Identifier: 89055014
GI number: 89055014
Start: 2523388
End: 2523750
Strand: Direct
Name: yitW [H]
Synonym: Jann_2523
Alternate gene names: 89055014
Gene position: 2523388-2523750 (Clockwise)
Preceding gene: 89055012
Following gene: 89055015
Centisome position: 58.44
GC content: 61.43
Gene sequence:
>363_bases ATGACCGAGCCGACACCCCAGATGGAAGGCGCGCCGCTGATCGCGCCCTCAAGCACCGATCACCCCCTCTACGACAATGT GGTAGAGGCGTGCCGGTCTGTCTATGATCCTGAAATCCCAGTGAATATCTACGACCTTGGTTTGATCTACACGATCGACA TCGGGGCCGAGAATGAGGTGTCCATCATCATGACGCTCACGGCGCCGGGCTGTCCCGTGGCCGGTGAAATGCCCGGCTGG CTCGCCGATGCGGTCGAGCCGCTGGACGGCGTGAAGCAAGTCGACGTGCAGATCACGTGGGAGCCGCCCTGGGGCATGGA CATGATGTCCGATGAGGCGCGCCTTGAACTGGGCTTCATGTAG
Upstream 100 bases:
>100_bases ACGTAAACACAAGGCGCAACCTGTTCCCGTGCCGGAGGCGTCTTTACGCCCTCCCTCCCAATCCCTATATCTTTGGTCAG ATATGACCACGGGATGACCC
Downstream 100 bases:
>100_bases TCACCGCAGCCAAACCCCTTTTGCCCGCTGAAAAAACTCGTCCTGTAAAGTCAGGCTATCCCTACACCCGATGCAGGCTT TCCTCCGTTGTCGGAACGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 120; Mature: 119
Protein sequence:
>120_residues MTEPTPQMEGAPLIAPSSTDHPLYDNVVEACRSVYDPEIPVNIYDLGLIYTIDIGAENEVSIIMTLTAPGCPVAGEMPGW LADAVEPLDGVKQVDVQITWEPPWGMDMMSDEARLELGFM
Sequences:
>Translated_120_residues MTEPTPQMEGAPLIAPSSTDHPLYDNVVEACRSVYDPEIPVNIYDLGLIYTIDIGAENEVSIIMTLTAPGCPVAGEMPGW LADAVEPLDGVKQVDVQITWEPPWGMDMMSDEARLELGFM >Mature_119_residues TEPTPQMEGAPLIAPSSTDHPLYDNVVEACRSVYDPEIPVNIYDLGLIYTIDIGAENEVSIIMTLTAPGCPVAGEMPGWL ADAVEPLDGVKQVDVQITWEPPWGMDMMSDEARLELGFM
Specific function: Unknown
COG id: COG2151
COG function: function code R; Predicted metal-sulfur cluster biosynthetic enzyme
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MIP18 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002744 [H]
Pfam domain/function: PF01883 DUF59 [H]
EC number: NA
Molecular weight: Translated: 13095; Mature: 12964
Theoretical pI: Translated: 3.44; Mature: 3.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 6.7 %Met (Translated Protein) 8.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 5.9 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEPTPQMEGAPLIAPSSTDHPLYDNVVEACRSVYDPEIPVNIYDLGLIYTIDIGAENEV CCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEECCCCCCE SIIMTLTAPGCPVAGEMPGWLADAVEPLDGVKQVDVQITWEPPWGMDMMSDEARLELGFM EEEEEEECCCCCCCCCCCCHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEECCC >Mature Secondary Structure TEPTPQMEGAPLIAPSSTDHPLYDNVVEACRSVYDPEIPVNIYDLGLIYTIDIGAENEV CCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEECCCCCCE SIIMTLTAPGCPVAGEMPGWLADAVEPLDGVKQVDVQITWEPPWGMDMMSDEARLELGFM EEEEEEECCCCCCCCCCCCHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9353931; 9025291; 9384377 [H]