| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89055007
Identifier: 89055007
GI number: 89055007
Start: 2514447
End: 2514956
Strand: Reverse
Name: 89055007
Synonym: Jann_2516
Alternate gene names: NA
Gene position: 2514956-2514447 (Counterclockwise)
Preceding gene: 89055008
Following gene: 89055006
Centisome position: 58.24
GC content: 62.35
Gene sequence:
>510_bases ATGTACAGAGCGAGGCAGACTGCAATGGCAACGACCACTCCGAGCAAACCCACAAAGCGCAAATCCACCTCCGCCGGGCC GCGCCGCTCGGTGACATCTGCCAAGACGACGGCCAAGACAGCCGCAAAGGCGGGTGGTCCCAAATCCGTGGCCGAGACGG CCCCTGCACCGGCAACGCCAACATCACCCAACGCGCCCATGCCAGCGGCGGCAGCATCCGCTTCTGATGATGATCGCCTG AAACGCCCCGATCTGATCGAGGCGGTGGCCAAGCGCGTGTCGCTGAAGCGGTCCGAGGCGAAAATGGTCTTTGATGTTGT CCTTGACGAGATTGGTAAAGCGCTCGACGCCTCCGACGAGGTTGTCGTGCCACCGCTTGGCAAGCTGATGATCAAGAAAC GCGTGGAAAAGCCCGGCGGCGACATGCTGACCGTGAAGCTGAAACGCGCTGAAGCGGACCCTGCCGCGGGCGATGTCGCC CCCCTTGCAGACCCGATTAAGGACAGCTAA
Upstream 100 bases:
>100_bases GCTGATTTCTGGGGCAGGGTGGTCCAATCACTCCGGTTCGGCTAGGTTGTTCCCAGATCAGAAACAATCAGTGTGCCGGG CCTTTGAGGTCAAGGCGCTG
Downstream 100 bases:
>100_bases AAGCGCCTCGGAATGGGTGATTAGCTCAGTGGTAGAGCGCTTCGTTCACATCGAAGATGTCAGGAGTTCAAATCTCTTAT CACCCACCATTCCTCCCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues MYRARQTAMATTTPSKPTKRKSTSAGPRRSVTSAKTTAKTAAKAGGPKSVAETAPAPATPTSPNAPMPAAAASASDDDRL KRPDLIEAVAKRVSLKRSEAKMVFDVVLDEIGKALDASDEVVVPPLGKLMIKKRVEKPGGDMLTVKLKRAEADPAAGDVA PLADPIKDS
Sequences:
>Translated_169_residues MYRARQTAMATTTPSKPTKRKSTSAGPRRSVTSAKTTAKTAAKAGGPKSVAETAPAPATPTSPNAPMPAAAASASDDDRL KRPDLIEAVAKRVSLKRSEAKMVFDVVLDEIGKALDASDEVVVPPLGKLMIKKRVEKPGGDMLTVKLKRAEADPAAGDVA PLADPIKDS >Mature_169_residues MYRARQTAMATTTPSKPTKRKSTSAGPRRSVTSAKTTAKTAAKAGGPKSVAETAPAPATPTSPNAPMPAAAASASDDDRL KRPDLIEAVAKRVSLKRSEAKMVFDVVLDEIGKALDASDEVVVPPLGKLMIKKRVEKPGGDMLTVKLKRAEADPAAGDVA PLADPIKDS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17571; Mature: 17571
Theoretical pI: Translated: 10.67; Mature: 10.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYRARQTAMATTTPSKPTKRKSTSAGPRRSVTSAKTTAKTAAKAGGPKSVAETAPAPATP CCCCCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHCCCCCCCC TSPNAPMPAAAASASDDDRLKRPDLIEAVAKRVSLKRSEAKMVFDVVLDEIGKALDASDE CCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC VVVPPLGKLMIKKRVEKPGGDMLTVKLKRAEADPAAGDVAPLADPIKDS EECCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MYRARQTAMATTTPSKPTKRKSTSAGPRRSVTSAKTTAKTAAKAGGPKSVAETAPAPATP CCCCCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHCCCCCCCC TSPNAPMPAAAASASDDDRLKRPDLIEAVAKRVSLKRSEAKMVFDVVLDEIGKALDASDE CCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC VVVPPLGKLMIKKRVEKPGGDMLTVKLKRAEADPAAGDVAPLADPIKDS EECCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA