| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is gpmB [H]
Identifier: 89055006
GI number: 89055006
Start: 2513704
End: 2514312
Strand: Reverse
Name: gpmB [H]
Synonym: Jann_2515
Alternate gene names: 89055006
Gene position: 2514312-2513704 (Counterclockwise)
Preceding gene: 89055007
Following gene: 89055005
Centisome position: 58.23
GC content: 62.73
Gene sequence:
>609_bases ATGCGCCCGTTGCCTGCCATTTACGTGCTGCGCCATGGTGAGACGGAGTGGAACCGGGAGGGGCGTTGCCAGGGTCACCT TGATGCGCCGCTGACACCGCTTGGACGGGATCAGGCCGCGCAACAGGGGCGGATTTTGCGCGATCAGGTGTTTGCCCATC ATCGCTCGTGTTCCGTTCGCATCAGCCCCCTGCAACGCACCCGCACGACCTGGGACATTGCGGCGGAGATCGCGGATCGC ACAGAGCAAGGGTTTGAGATCGAGCCGAGGTTGGCCGAGGTTCACATGGGCACCTGGCAGGGTCGCCTGCGCAAGGATTT CCTGGCGGAGGACGCCGCCGCGCGTGCACATCCAAACCTGTTTGAGCTGTCTCTGAACACCCCTGAAGGAGAACGATTTG AGGCGCTGAGCGCGCGCCTTGAGGACCTGTTGGATGAGATCACCGAACCTGCCATCTGCGTCACCCATGGCATCACATCG CTTGTCCTGCGGGGGCTGATCCGCGGCCTCAGCCGGGACGAGATGGCCGGGCAGGGGCATGACCAGGGTATCGTATACGG GCTTTGGGATGGGCAGGAATATCGTCTGGAGGACAATGACGCCGATTGA
Upstream 100 bases:
>100_bases GAGCGCTTCGTTCACATCGAAGATGTCAGGAGTTCAAATCTCTTATCACCCACCATTCCTCCCCCGGCAGTCAGACGTTC AGCACTAGGCGGCAGACGTG
Downstream 100 bases:
>100_bases GCGCATCGCGGCAAGATTGCCTCTTGCCCGCGCCCGCATCCTCGCGCTATCAGCCGTGCCAGCGGGTCGTTAGCTCAGTT GGTAGAGCGCTTCGTTTACA
Product: phosphoglycerate mutase
Products: NA
Alternate protein names: PGAM; Phosphoglyceromutase [H]
Number of amino acids: Translated: 202; Mature: 202
Protein sequence:
>202_residues MRPLPAIYVLRHGETEWNREGRCQGHLDAPLTPLGRDQAAQQGRILRDQVFAHHRSCSVRISPLQRTRTTWDIAAEIADR TEQGFEIEPRLAEVHMGTWQGRLRKDFLAEDAAARAHPNLFELSLNTPEGERFEALSARLEDLLDEITEPAICVTHGITS LVLRGLIRGLSRDEMAGQGHDQGIVYGLWDGQEYRLEDNDAD
Sequences:
>Translated_202_residues MRPLPAIYVLRHGETEWNREGRCQGHLDAPLTPLGRDQAAQQGRILRDQVFAHHRSCSVRISPLQRTRTTWDIAAEIADR TEQGFEIEPRLAEVHMGTWQGRLRKDFLAEDAAARAHPNLFELSLNTPEGERFEALSARLEDLLDEITEPAICVTHGITS LVLRGLIRGLSRDEMAGQGHDQGIVYGLWDGQEYRLEDNDAD >Mature_202_residues MRPLPAIYVLRHGETEWNREGRCQGHLDAPLTPLGRDQAAQQGRILRDQVFAHHRSCSVRISPLQRTRTTWDIAAEIADR TEQGFEIEPRLAEVHMGTWQGRLRKDFLAEDAAARAHPNLFELSLNTPEGERFEALSARLEDLLDEITEPAICVTHGITS LVLRGLIRGLSRDEMAGQGHDQGIVYGLWDGQEYRLEDNDAD
Specific function: Unknown
COG id: COG0406
COG function: function code G; Fructose-2,6-bisphosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate mutase family. GpmB subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790856, Length=171, Percent_Identity=32.7485380116959, Blast_Score=65, Evalue=4e-12, Organism=Escherichia coli, GI1786857, Length=184, Percent_Identity=31.5217391304348, Blast_Score=61, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013078 - InterPro: IPR001345 - InterPro: IPR023086 [H]
Pfam domain/function: PF00300 PGAM [H]
EC number: =5.4.2.1 [H]
Molecular weight: Translated: 22856; Mature: 22856
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: PS00175 PG_MUTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPLPAIYVLRHGETEWNREGRCQGHLDAPLTPLGRDQAAQQGRILRDQVFAHHRSCSVR CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHCCCEEE ISPLQRTRTTWDIAAEIADRTEQGFEIEPRLAEVHMGTWQGRLRKDFLAEDAAARAHPNL ECCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHEEECCHHHHHHHHHHHHHHHHHHCCCCE FELSLNTPEGERFEALSARLEDLLDEITEPAICVTHGITSLVLRGLIRGLSRDEMAGQGH EEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHCCCCHHHCCCCC DQGIVYGLWDGQEYRLEDNDAD CCCEEEEEECCCEEECCCCCCC >Mature Secondary Structure MRPLPAIYVLRHGETEWNREGRCQGHLDAPLTPLGRDQAAQQGRILRDQVFAHHRSCSVR CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHCCCEEE ISPLQRTRTTWDIAAEIADRTEQGFEIEPRLAEVHMGTWQGRLRKDFLAEDAAARAHPNL ECCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHEEECCHHHHHHHHHHHHHHHHHHCCCCE FELSLNTPEGERFEALSARLEDLLDEITEPAICVTHGITSLVLRGLIRGLSRDEMAGQGH EEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHCCCCHHHCCCCC DQGIVYGLWDGQEYRLEDNDAD CCCEEEEEECCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA