| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
Click here to switch to the map view.
The map label for this gene is 89055001
Identifier: 89055001
GI number: 89055001
Start: 2510359
End: 2510874
Strand: Reverse
Name: 89055001
Synonym: Jann_2510
Alternate gene names: NA
Gene position: 2510874-2510359 (Counterclockwise)
Preceding gene: 89055004
Following gene: 89055000
Centisome position: 58.15
GC content: 66.47
Gene sequence:
>516_bases ATGGACCTCCGCCCCGCAATCCCCTCGGACCTGCCCGAGATCGCCCGCCTGCATGAGGCGAACTGGCGGCGCGATTACGT GGGAATATTGCCAGAAGTGGTCCTTGGCGCGCCGCTCTCGGCCCATATGGCGAAGGAATGGACCGTCAATGCCCTGGACA CACGGCGCGTCTTTGTGATGGTCGACGGCGGGTCGATTGTTGGTTTCGCGGCGATGCAGGATGACGGCCCGCACGAATGT GCCTTTCTCGACAACCTGCATGTGGAGCCCTCCGCGCGGGCCCAAGGGGTGGGGCGGGCGTTGATGTCTGCCGTTGCGGT TCTGGCCGTGCCCGGCGCCCTTACCCTGGACGTGCTCAGCGCCAACACGGCTGCGCGCGCGATCTACCGTCGGTGGGGCG GGCAGGAATCGGTGGAGTTCGACGATGAGGTTTTGGGCGTGACCGTGCCTGCCGTCACCGTCGGTTGGCGCAACACGGTT GACCTTCTGGACCGGCTCAGGGGGCAGGGCCGGTGA
Upstream 100 bases:
>100_bases CGGATACCGGGGTGAAGCGGCTTTAGGTCAAGCGATTTATGACCGGGTCGCGCGACATAGGGGCCTTGCAGCGCATCGTG GCGCAGGGCACCAATTCCCC
Downstream 100 bases:
>100_bases CATCCCCTGACGCCACGCCCCCCGATGCCACACCGCTGCGCGCCATCATGCTGATCCTTCTGGGGATGGCCTGTATCTCG ATCAACGATATGCTGATCAA
Product: GCN5-like N-acetyltransferase
Products: NA
Alternate protein names: GNAT Family N-Acetyltransferase; Acetyltransferase
Number of amino acids: Translated: 171; Mature: 171
Protein sequence:
>171_residues MDLRPAIPSDLPEIARLHEANWRRDYVGILPEVVLGAPLSAHMAKEWTVNALDTRRVFVMVDGGSIVGFAAMQDDGPHEC AFLDNLHVEPSARAQGVGRALMSAVAVLAVPGALTLDVLSANTAARAIYRRWGGQESVEFDDEVLGVTVPAVTVGWRNTV DLLDRLRGQGR
Sequences:
>Translated_171_residues MDLRPAIPSDLPEIARLHEANWRRDYVGILPEVVLGAPLSAHMAKEWTVNALDTRRVFVMVDGGSIVGFAAMQDDGPHEC AFLDNLHVEPSARAQGVGRALMSAVAVLAVPGALTLDVLSANTAARAIYRRWGGQESVEFDDEVLGVTVPAVTVGWRNTV DLLDRLRGQGR >Mature_171_residues MDLRPAIPSDLPEIARLHEANWRRDYVGILPEVVLGAPLSAHMAKEWTVNALDTRRVFVMVDGGSIVGFAAMQDDGPHEC AFLDNLHVEPSARAQGVGRALMSAVAVLAVPGALTLDVLSANTAARAIYRRWGGQESVEFDDEVLGVTVPAVTVGWRNTV DLLDRLRGQGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18493; Mature: 18493
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLRPAIPSDLPEIARLHEANWRRDYVGILPEVVLGAPLSAHMAKEWTVNALDTRRVFVM CCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHCEEEEECCEEEEEE VDGGSIVGFAAMQDDGPHECAFLDNLHVEPSARAQGVGRALMSAVAVLAVPGALTLDVLS EECCCEEEEEEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEHH ANTAARAIYRRWGGQESVEFDDEVLGVTVPAVTVGWRNTVDLLDRLRGQGR CCHHHHHHHHHHCCCCCCCCCCCEEEEEECEEEECCCCHHHHHHHHHCCCC >Mature Secondary Structure MDLRPAIPSDLPEIARLHEANWRRDYVGILPEVVLGAPLSAHMAKEWTVNALDTRRVFVM CCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHCEEEEECCEEEEEE VDGGSIVGFAAMQDDGPHECAFLDNLHVEPSARAQGVGRALMSAVAVLAVPGALTLDVLS EECCCEEEEEEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEHH ANTAARAIYRRWGGQESVEFDDEVLGVTVPAVTVGWRNTVDLLDRLRGQGR CCHHHHHHHHHHCCCCCCCCCCCEEEEEECEEEECCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA