| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
Click here to switch to the map view.
The map label for this gene is sam [H]
Identifier: 89055000
GI number: 89055000
Start: 2509361
End: 2510362
Strand: Reverse
Name: sam [H]
Synonym: Jann_2509
Alternate gene names: 89055000
Gene position: 2510362-2509361 (Counterclockwise)
Preceding gene: 89055001
Following gene: 89054999
Centisome position: 58.14
GC content: 62.97
Gene sequence:
>1002_bases GTGACATCCCCTGACGCCACGCCCCCCGATGCCACACCGCTGCGCGCCATCATGCTGATCCTTCTGGGGATGGCCTGTAT CTCGATCAACGATATGCTGATCAAACTTCTGTCCGGTGGCTATCCCCTGCACCAGATGGTGTTCATCCGCTCAGTCATCG GGATCTTTGCCACATCGGTCTTTGTCTGGTTCGAGGGCGGCTGGCGTATCCTGAAAACGGACCGCCCGGGCCTGCACCTG ATCCGTGCCGGGCTGATCGTCTGCGCCAACATGATCTATTTTGCTGGCCTGTCCGTCATGCCTCTGGGTGTGGCGACGGC GCTGTTCTTCGTGGCCCCGCTGTTCATCACCCTTCTCGCCATCCCGGTATTGGGAGAGGCGGTGGGCCGCCACCGGCTCA CGGCGCTTCTCATCGGGTTTGTGGGTGTCGCCGTGATGATGATCCCCGCGACCGATTGGAATGACGTCCCCCGCGCCGCC ATGTTGCTGCCGATCGTTGCCGCCGCCTGCTATGCGGGGATGCAGGTGATGACCCGCAAACTGGGCGCAAAATCTGCCGC ATCGGCCATGGCGATCTATATTCAGGTCGCATTTATCGTGGTCTCCACCCTGTCCTATATCGCGGTCGGCCATGGCCGGT ATGCCGAAGGTGTGGAGAGTGAGAGCCTCGTCTTCCTTTTGCGCGCCTGGGTCTGGCCCGCAACGGAGGACATCTGGAAA TTCGCGGTTCTGGGCGCCATGTCCGCCGTGATCGGCTATTGCCTGTCCGCCGCCTACCGCATCGGCAACGCCGCGACCGT CGCCTCCTACGAATATGCGGCGCTGCCCATGGCAATTCTGCTGGGGTGGCTGGTCTTTGCCGAGCGTCCGAGCTGGGTCA TGATCCTTGGAACGGCCCTCATCGCTTTTGCGGGTCTCTATGTCTTCGCCCGTGAGCGTCGCCGCGCTGGTACCGGAGGT CCATCCGGCCCCGCCGCCGAACGCCCCCTGCGCCGAGGTTGA
Upstream 100 bases:
>100_bases TGGAGTTCGACGATGAGGTTTTGGGCGTGACCGTGCCTGCCGTCACCGTCGGTTGGCGCAACACGGTTGACCTTCTGGAC CGGCTCAGGGGGCAGGGCCG
Downstream 100 bases:
>100_bases CCCGCTGAGTTATGCGAAACCTTGGTGTCGCCGCGTGCGCCCGCTTGACGAGGGTCTGACCTCGCCATACACGATCCGAA CGCGAGGTGCTGTCTCGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 333; Mature: 332
Protein sequence:
>333_residues MTSPDATPPDATPLRAIMLILLGMACISINDMLIKLLSGGYPLHQMVFIRSVIGIFATSVFVWFEGGWRILKTDRPGLHL IRAGLIVCANMIYFAGLSVMPLGVATALFFVAPLFITLLAIPVLGEAVGRHRLTALLIGFVGVAVMMIPATDWNDVPRAA MLLPIVAAACYAGMQVMTRKLGAKSAASAMAIYIQVAFIVVSTLSYIAVGHGRYAEGVESESLVFLLRAWVWPATEDIWK FAVLGAMSAVIGYCLSAAYRIGNAATVASYEYAALPMAILLGWLVFAERPSWVMILGTALIAFAGLYVFARERRRAGTGG PSGPAAERPLRRG
Sequences:
>Translated_333_residues MTSPDATPPDATPLRAIMLILLGMACISINDMLIKLLSGGYPLHQMVFIRSVIGIFATSVFVWFEGGWRILKTDRPGLHL IRAGLIVCANMIYFAGLSVMPLGVATALFFVAPLFITLLAIPVLGEAVGRHRLTALLIGFVGVAVMMIPATDWNDVPRAA MLLPIVAAACYAGMQVMTRKLGAKSAASAMAIYIQVAFIVVSTLSYIAVGHGRYAEGVESESLVFLLRAWVWPATEDIWK FAVLGAMSAVIGYCLSAAYRIGNAATVASYEYAALPMAILLGWLVFAERPSWVMILGTALIAFAGLYVFARERRRAGTGG PSGPAAERPLRRG >Mature_332_residues TSPDATPPDATPLRAIMLILLGMACISINDMLIKLLSGGYPLHQMVFIRSVIGIFATSVFVWFEGGWRILKTDRPGLHLI RAGLIVCANMIYFAGLSVMPLGVATALFFVAPLFITLLAIPVLGEAVGRHRLTALLIGFVGVAVMMIPATDWNDVPRAAM LLPIVAAACYAGMQVMTRKLGAKSAASAMAIYIQVAFIVVSTLSYIAVGHGRYAEGVESESLVFLLRAWVWPATEDIWKF AVLGAMSAVIGYCLSAAYRIGNAATVASYEYAALPMAILLGWLVFAERPSWVMILGTALIAFAGLYVFARERRRAGTGGP SGPAAERPLRRG
Specific function: Transports S-adenosylmethionine [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the drug/metabolite transporter (DMT) superfamily. 10 TMS drug/metabolite exporter (TC 2.A.7.3) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 35698; Mature: 35567
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSPDATPPDATPLRAIMLILLGMACISINDMLIKLLSGGYPLHQMVFIRSVIGIFATSV CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH FVWFEGGWRILKTDRPGLHLIRAGLIVCANMIYFAGLSVMPLGVATALFFVAPLFITLLA HHEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH IPVLGEAVGRHRLTALLIGFVGVAVMMIPATDWNDVPRAAMLLPIVAAACYAGMQVMTRK HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LGAKSAASAMAIYIQVAFIVVSTLSYIAVGHGRYAEGVESESLVFLLRAWVWPATEDIWK HCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHCCCCHHHHHH FAVLGAMSAVIGYCLSAAYRIGNAATVASYEYAALPMAILLGWLVFAERPSWVMILGTAL HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH IAFAGLYVFARERRRAGTGGPSGPAAERPLRRG HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TSPDATPPDATPLRAIMLILLGMACISINDMLIKLLSGGYPLHQMVFIRSVIGIFATSV CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH FVWFEGGWRILKTDRPGLHLIRAGLIVCANMIYFAGLSVMPLGVATALFFVAPLFITLLA HHEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH IPVLGEAVGRHRLTALLIGFVGVAVMMIPATDWNDVPRAAMLLPIVAAACYAGMQVMTRK HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LGAKSAASAMAIYIQVAFIVVSTLSYIAVGHGRYAEGVESESLVFLLRAWVWPATEDIWK HCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHCCCCHHHHHH FAVLGAMSAVIGYCLSAAYRIGNAATVASYEYAALPMAILLGWLVFAERPSWVMILGTAL HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH IAFAGLYVFARERRRAGTGGPSGPAAERPLRRG HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA