Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is sam [H]

Identifier: 89055000

GI number: 89055000

Start: 2509361

End: 2510362

Strand: Reverse

Name: sam [H]

Synonym: Jann_2509

Alternate gene names: 89055000

Gene position: 2510362-2509361 (Counterclockwise)

Preceding gene: 89055001

Following gene: 89054999

Centisome position: 58.14

GC content: 62.97

Gene sequence:

>1002_bases
GTGACATCCCCTGACGCCACGCCCCCCGATGCCACACCGCTGCGCGCCATCATGCTGATCCTTCTGGGGATGGCCTGTAT
CTCGATCAACGATATGCTGATCAAACTTCTGTCCGGTGGCTATCCCCTGCACCAGATGGTGTTCATCCGCTCAGTCATCG
GGATCTTTGCCACATCGGTCTTTGTCTGGTTCGAGGGCGGCTGGCGTATCCTGAAAACGGACCGCCCGGGCCTGCACCTG
ATCCGTGCCGGGCTGATCGTCTGCGCCAACATGATCTATTTTGCTGGCCTGTCCGTCATGCCTCTGGGTGTGGCGACGGC
GCTGTTCTTCGTGGCCCCGCTGTTCATCACCCTTCTCGCCATCCCGGTATTGGGAGAGGCGGTGGGCCGCCACCGGCTCA
CGGCGCTTCTCATCGGGTTTGTGGGTGTCGCCGTGATGATGATCCCCGCGACCGATTGGAATGACGTCCCCCGCGCCGCC
ATGTTGCTGCCGATCGTTGCCGCCGCCTGCTATGCGGGGATGCAGGTGATGACCCGCAAACTGGGCGCAAAATCTGCCGC
ATCGGCCATGGCGATCTATATTCAGGTCGCATTTATCGTGGTCTCCACCCTGTCCTATATCGCGGTCGGCCATGGCCGGT
ATGCCGAAGGTGTGGAGAGTGAGAGCCTCGTCTTCCTTTTGCGCGCCTGGGTCTGGCCCGCAACGGAGGACATCTGGAAA
TTCGCGGTTCTGGGCGCCATGTCCGCCGTGATCGGCTATTGCCTGTCCGCCGCCTACCGCATCGGCAACGCCGCGACCGT
CGCCTCCTACGAATATGCGGCGCTGCCCATGGCAATTCTGCTGGGGTGGCTGGTCTTTGCCGAGCGTCCGAGCTGGGTCA
TGATCCTTGGAACGGCCCTCATCGCTTTTGCGGGTCTCTATGTCTTCGCCCGTGAGCGTCGCCGCGCTGGTACCGGAGGT
CCATCCGGCCCCGCCGCCGAACGCCCCCTGCGCCGAGGTTGA

Upstream 100 bases:

>100_bases
TGGAGTTCGACGATGAGGTTTTGGGCGTGACCGTGCCTGCCGTCACCGTCGGTTGGCGCAACACGGTTGACCTTCTGGAC
CGGCTCAGGGGGCAGGGCCG

Downstream 100 bases:

>100_bases
CCCGCTGAGTTATGCGAAACCTTGGTGTCGCCGCGTGCGCCCGCTTGACGAGGGTCTGACCTCGCCATACACGATCCGAA
CGCGAGGTGCTGTCTCGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 332

Protein sequence:

>333_residues
MTSPDATPPDATPLRAIMLILLGMACISINDMLIKLLSGGYPLHQMVFIRSVIGIFATSVFVWFEGGWRILKTDRPGLHL
IRAGLIVCANMIYFAGLSVMPLGVATALFFVAPLFITLLAIPVLGEAVGRHRLTALLIGFVGVAVMMIPATDWNDVPRAA
MLLPIVAAACYAGMQVMTRKLGAKSAASAMAIYIQVAFIVVSTLSYIAVGHGRYAEGVESESLVFLLRAWVWPATEDIWK
FAVLGAMSAVIGYCLSAAYRIGNAATVASYEYAALPMAILLGWLVFAERPSWVMILGTALIAFAGLYVFARERRRAGTGG
PSGPAAERPLRRG

Sequences:

>Translated_333_residues
MTSPDATPPDATPLRAIMLILLGMACISINDMLIKLLSGGYPLHQMVFIRSVIGIFATSVFVWFEGGWRILKTDRPGLHL
IRAGLIVCANMIYFAGLSVMPLGVATALFFVAPLFITLLAIPVLGEAVGRHRLTALLIGFVGVAVMMIPATDWNDVPRAA
MLLPIVAAACYAGMQVMTRKLGAKSAASAMAIYIQVAFIVVSTLSYIAVGHGRYAEGVESESLVFLLRAWVWPATEDIWK
FAVLGAMSAVIGYCLSAAYRIGNAATVASYEYAALPMAILLGWLVFAERPSWVMILGTALIAFAGLYVFARERRRAGTGG
PSGPAAERPLRRG
>Mature_332_residues
TSPDATPPDATPLRAIMLILLGMACISINDMLIKLLSGGYPLHQMVFIRSVIGIFATSVFVWFEGGWRILKTDRPGLHLI
RAGLIVCANMIYFAGLSVMPLGVATALFFVAPLFITLLAIPVLGEAVGRHRLTALLIGFVGVAVMMIPATDWNDVPRAAM
LLPIVAAACYAGMQVMTRKLGAKSAASAMAIYIQVAFIVVSTLSYIAVGHGRYAEGVESESLVFLLRAWVWPATEDIWKF
AVLGAMSAVIGYCLSAAYRIGNAATVASYEYAALPMAILLGWLVFAERPSWVMILGTALIAFAGLYVFARERRRAGTGGP
SGPAAERPLRRG

Specific function: Transports S-adenosylmethionine [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the drug/metabolite transporter (DMT) superfamily. 10 TMS drug/metabolite exporter (TC 2.A.7.3) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 35698; Mature: 35567

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSPDATPPDATPLRAIMLILLGMACISINDMLIKLLSGGYPLHQMVFIRSVIGIFATSV
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
FVWFEGGWRILKTDRPGLHLIRAGLIVCANMIYFAGLSVMPLGVATALFFVAPLFITLLA
HHEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
IPVLGEAVGRHRLTALLIGFVGVAVMMIPATDWNDVPRAAMLLPIVAAACYAGMQVMTRK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LGAKSAASAMAIYIQVAFIVVSTLSYIAVGHGRYAEGVESESLVFLLRAWVWPATEDIWK
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHCCCCHHHHHH
FAVLGAMSAVIGYCLSAAYRIGNAATVASYEYAALPMAILLGWLVFAERPSWVMILGTAL
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
IAFAGLYVFARERRRAGTGGPSGPAAERPLRRG
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TSPDATPPDATPLRAIMLILLGMACISINDMLIKLLSGGYPLHQMVFIRSVIGIFATSV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
FVWFEGGWRILKTDRPGLHLIRAGLIVCANMIYFAGLSVMPLGVATALFFVAPLFITLLA
HHEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
IPVLGEAVGRHRLTALLIGFVGVAVMMIPATDWNDVPRAAMLLPIVAAACYAGMQVMTRK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LGAKSAASAMAIYIQVAFIVVSTLSYIAVGHGRYAEGVESESLVFLLRAWVWPATEDIWK
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHCCCCHHHHHH
FAVLGAMSAVIGYCLSAAYRIGNAATVASYEYAALPMAILLGWLVFAERPSWVMILGTAL
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
IAFAGLYVFARERRRAGTGGPSGPAAERPLRRG
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA