Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89054999

Identifier: 89054999

GI number: 89054999

Start: 2507906

End: 2508586

Strand: Reverse

Name: 89054999

Synonym: Jann_2508

Alternate gene names: NA

Gene position: 2508586-2507906 (Counterclockwise)

Preceding gene: 89055000

Following gene: 89054997

Centisome position: 58.1

GC content: 63.73

Gene sequence:

>681_bases
ATGTTTCGGAGCCTACTCGCCCTTGTCGTCGCCGGTCAGTCGGCCTCCGCGCAGGAGGTGGCGATTGCCTTCCCACTGCG
CGATGTTCTGGAGCTCGCCACTCAGGCCCATCTCGATGCCAGCGGGTTTGAACATGTGCTGGCCCAAGCGCTTCCGATCA
CCAGCGAACCAACGCCCTTGCCCAACTTCCAGCCAGACCCGTTCCTCTGGTCGCTCACCGGCAGCTTCGGTGGGGGCGGC
GCGCATCCCCGGGCCGGAGCCATCTTCGCCTGCGCCCGCTATGGTCTGGGGACCCGTGATCTGTTCGCCGAGCATGGGCT
GACCGCGCGGGAGAGCTTCACGCTCATGGGTCAGGCGCGACCTCAGTTTGACGACGCAAGCGTCTGGCCGGACGGGGCGG
TCGCGCGGCTCCATTGTTCGTTCGTCTGGGACGATGCGCGCGTGGTGGCAATCCTGCCCGAGCATGACACCCAACTTGCA
TTGGCAGAGGTGTTCAACACGCTCACCGCCTTGCCGCAGACAAACGGGACCCGCATTATTTACGGGGAGGACGGATATCG
CCTTGATGCCACAGACGGCCCCGGCGATACGATGGTTCATGTCGAAAGCGCCCGGATGACCCTGACGCTTGGACACCAAT
CGTTTACGTTTCGGAGCTTTCTGATGGGTGGCGGGGTTTGA

Upstream 100 bases:

>100_bases
TTGCGTCACTTGAGGGCGTCAGACCAAGCCTTTCTGACGGCATATCCATCGCTTTGCGTTTGTGGGATACGCTCCGCAGA
ATGTTGCGTTACGGTGCGAT

Downstream 100 bases:

>100_bases
TCGCCGCACCTACCCCTTGTGGATCCAGCCGCCCCCGAAGATCCGCCCGCCTTCGGGCGCGTAGAAAACGCAGGCCTGTC
CGGGGCTGACGCCCTCTTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MFRSLLALVVAGQSASAQEVAIAFPLRDVLELATQAHLDASGFEHVLAQALPITSEPTPLPNFQPDPFLWSLTGSFGGGG
AHPRAGAIFACARYGLGTRDLFAEHGLTARESFTLMGQARPQFDDASVWPDGAVARLHCSFVWDDARVVAILPEHDTQLA
LAEVFNTLTALPQTNGTRIIYGEDGYRLDATDGPGDTMVHVESARMTLTLGHQSFTFRSFLMGGGV

Sequences:

>Translated_226_residues
MFRSLLALVVAGQSASAQEVAIAFPLRDVLELATQAHLDASGFEHVLAQALPITSEPTPLPNFQPDPFLWSLTGSFGGGG
AHPRAGAIFACARYGLGTRDLFAEHGLTARESFTLMGQARPQFDDASVWPDGAVARLHCSFVWDDARVVAILPEHDTQLA
LAEVFNTLTALPQTNGTRIIYGEDGYRLDATDGPGDTMVHVESARMTLTLGHQSFTFRSFLMGGGV
>Mature_226_residues
MFRSLLALVVAGQSASAQEVAIAFPLRDVLELATQAHLDASGFEHVLAQALPITSEPTPLPNFQPDPFLWSLTGSFGGGG
AHPRAGAIFACARYGLGTRDLFAEHGLTARESFTLMGQARPQFDDASVWPDGAVARLHCSFVWDDARVVAILPEHDTQLA
LAEVFNTLTALPQTNGTRIIYGEDGYRLDATDGPGDTMVHVESARMTLTLGHQSFTFRSFLMGGGV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24229; Mature: 24229

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRSLLALVVAGQSASAQEVAIAFPLRDVLELATQAHLDASGFEHVLAQALPITSEPTPL
CHHHHEEHHHCCCCCCCCEEEEEECHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCC
PNFQPDPFLWSLTGSFGGGGAHPRAGAIFACARYGLGTRDLFAEHGLTARESFTLMGQAR
CCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHCCCCCCCCEEEEECCC
PQFDDASVWPDGAVARLHCSFVWDDARVVAILPEHDTQLALAEVFNTLTALPQTNGTRII
CCCCCCCCCCCCCEEEEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCEEE
YGEDGYRLDATDGPGDTMVHVESARMTLTLGHQSFTFRSFLMGGGV
ECCCCCEEECCCCCCCEEEEEECCEEEEEECCCCHHHHHHHHCCCC
>Mature Secondary Structure
MFRSLLALVVAGQSASAQEVAIAFPLRDVLELATQAHLDASGFEHVLAQALPITSEPTPL
CHHHHEEHHHCCCCCCCCEEEEEECHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCC
PNFQPDPFLWSLTGSFGGGGAHPRAGAIFACARYGLGTRDLFAEHGLTARESFTLMGQAR
CCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHCCCCCCCCEEEEECCC
PQFDDASVWPDGAVARLHCSFVWDDARVVAILPEHDTQLALAEVFNTLTALPQTNGTRII
CCCCCCCCCCCCCEEEEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCEEE
YGEDGYRLDATDGPGDTMVHVESARMTLTLGHQSFTFRSFLMGGGV
ECCCCCEEECCCCCCCEEEEEECCEEEEEECCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA