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The map label for this gene is 89054983

Identifier: 89054983

GI number: 89054983

Start: 2491512

End: 2492090

Strand: Direct

Name: 89054983

Synonym: Jann_2492

Alternate gene names: NA

Gene position: 2491512-2492090 (Clockwise)

Preceding gene: 89054982

Following gene: 89054984

Centisome position: 57.7

GC content: 60.97

Gene sequence:

>579_bases
ATGCTGCGCCGCCTTTATGATTGGGTTATGGGATTTGCAGGCCACCCCCGTGCGCTTTGGGTGTTGGCGATTGTGAGCTT
TGCCGAAAGTTCGGTCTTTCCGATCCCGCCGGACGTTCTGATGATCCCGATGATTCTGGCGCGCCCGTCGCGCGCGTGGC
TGATTGCCGGGGTCTGCCTTGTGGCCTCCGTCCTGGGCGGCCTGTTGGGCTACGCGATCGGCTATTTCGCGTTCGAGGAG
ATCGGGCGGCCAATCTTCGAGAGCCTGGGCAAGGTGGAGCGGATCGAGGAATTCAACGCGCGCTTCAACGATGTGGGCTT
TTGGGCGGTGCTGATCGCGGGCCTGACGCCCTTCCCGTACAAGGTCATCACCATCATGTCGGGCTGGACGGCCATGCCAC
TTGGCACGTTCATCGTGACGTCTATCGTGGCGCGCGGTTTGCGCTTCTTTATCGTGGCCGCGCTGCTGTGGAAGTTCGGG
GAACCGATCAAGGCGTTTATCGAGCGGCAATTGCCGCTGATGTTCATCCTGTTCTGCGCGCTGCTGGTCGGCGGCTTCTA
CGTGCTGAAGTTCCTGTGA

Upstream 100 bases:

>100_bases
AGCGCTCTGATCCGGGCGCGTCAATATGGGTTAAGCAGGCGCTTGCCCCCCCTGCCCCGATGCGGCAAACGGAAGACGTA
TTTCAAGTGAGGACGCGAGT

Downstream 100 bases:

>100_bases
TGGCCTCCCGGCGCAACCTGATCATTCTGGCGGGCCTGGGCTCGCTCGGGCTGTTTCTGGGTGCGCTCTACTTTCAGTAT
TGGGTGGGTCTGCTGCCTTG

Product: DedA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MLRRLYDWVMGFAGHPRALWVLAIVSFAESSVFPIPPDVLMIPMILARPSRAWLIAGVCLVASVLGGLLGYAIGYFAFEE
IGRPIFESLGKVERIEEFNARFNDVGFWAVLIAGLTPFPYKVITIMSGWTAMPLGTFIVTSIVARGLRFFIVAALLWKFG
EPIKAFIERQLPLMFILFCALLVGGFYVLKFL

Sequences:

>Translated_192_residues
MLRRLYDWVMGFAGHPRALWVLAIVSFAESSVFPIPPDVLMIPMILARPSRAWLIAGVCLVASVLGGLLGYAIGYFAFEE
IGRPIFESLGKVERIEEFNARFNDVGFWAVLIAGLTPFPYKVITIMSGWTAMPLGTFIVTSIVARGLRFFIVAALLWKFG
EPIKAFIERQLPLMFILFCALLVGGFYVLKFL
>Mature_192_residues
MLRRLYDWVMGFAGHPRALWVLAIVSFAESSVFPIPPDVLMIPMILARPSRAWLIAGVCLVASVLGGLLGYAIGYFAFEE
IGRPIFESLGKVERIEEFNARFNDVGFWAVLIAGLTPFPYKVITIMSGWTAMPLGTFIVTSIVARGLRFFIVAALLWKFG
EPIKAFIERQLPLMFILFCALLVGGFYVLKFL

Specific function: Unknown

COG id: COG1238

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 21471; Mature: 21471

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRRLYDWVMGFAGHPRALWVLAIVSFAESSVFPIPPDVLMIPMILARPSRAWLIAGVCL
CHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHH
VASVLGGLLGYAIGYFAFEEIGRPIFESLGKVERIEEFNARFNDVGFWAVLIAGLTPFPY
HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
KVITIMSGWTAMPLGTFIVTSIVARGLRFFIVAALLWKFGEPIKAFIERQLPLMFILFCA
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHH
LLVGGFYVLKFL
HHHHHHHHHHCC
>Mature Secondary Structure
MLRRLYDWVMGFAGHPRALWVLAIVSFAESSVFPIPPDVLMIPMILARPSRAWLIAGVCL
CHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHH
VASVLGGLLGYAIGYFAFEEIGRPIFESLGKVERIEEFNARFNDVGFWAVLIAGLTPFPY
HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
KVITIMSGWTAMPLGTFIVTSIVARGLRFFIVAALLWKFGEPIKAFIERQLPLMFILFCA
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHH
LLVGGFYVLKFL
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8478068 [H]