| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054982
Identifier: 89054982
GI number: 89054982
Start: 2490915
End: 2491298
Strand: Direct
Name: 89054982
Synonym: Jann_2491
Alternate gene names: NA
Gene position: 2490915-2491298 (Clockwise)
Preceding gene: 89054980
Following gene: 89054983
Centisome position: 57.69
GC content: 62.24
Gene sequence:
>384_bases TTGTTGCCGAATTTCGAGATAAGTCCCGCGGAGACCTATCTTTTTAGACAAGTCCTTTCAGTCAGGTGCGGGGGGATCCC AAGTCAAGCGGCGCGAATCACCTCGCTTGCCCGGGACGACGACGAGCGATTTTGTGGACTCCGCGCGATTGAGCGTAAAA TGGCCGAAGTACGGGCCAGAGAGGAGCCGTCCCTGTGGGGCTGTGCGTCGGTCGGGGCTCTCGGATTTGAAATCGCGGGG CCGGACTTGCCCGTAGCTGCGGCCGGTTTGGGCGCAGGGATACCCGGATATCGGACGGCATCCCGCCGAGTTGACACCGT CAGGTCGCCGCCGTTCGGTCGCGCAGGGTATGCTGCGCAAGCCCACACCGAACACGCGCTATGA
Upstream 100 bases:
>100_bases TGCCTGACAATATGCGGTCGGAGGCGAGGGATTTGCCGCCACTCTTCCTAAAATTGTTCGAAAATGGGAAACAGTTTTGG GATGACGTCACGGAAACACA
Downstream 100 bases:
>100_bases TCTGTCAGAGCCTGGTACCCGAGGTCGGACTCGAACCGACAAGCCTCGCGGCGGGGGATTTTGAATCCCCTGCGTCTACC AATTCCGCCACTCGGGCCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 127; Mature: 127
Protein sequence:
>127_residues MLPNFEISPAETYLFRQVLSVRCGGIPSQAARITSLARDDDERFCGLRAIERKMAEVRAREEPSLWGCASVGALGFEIAG PDLPVAAAGLGAGIPGYRTASRRVDTVRSPPFGRAGYAAQAHTEHAL
Sequences:
>Translated_127_residues MLPNFEISPAETYLFRQVLSVRCGGIPSQAARITSLARDDDERFCGLRAIERKMAEVRAREEPSLWGCASVGALGFEIAG PDLPVAAAGLGAGIPGYRTASRRVDTVRSPPFGRAGYAAQAHTEHAL >Mature_127_residues MLPNFEISPAETYLFRQVLSVRCGGIPSQAARITSLARDDDERFCGLRAIERKMAEVRAREEPSLWGCASVGALGFEIAG PDLPVAAAGLGAGIPGYRTASRRVDTVRSPPFGRAGYAAQAHTEHAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13571; Mature: 13571
Theoretical pI: Translated: 8.06; Mature: 8.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPNFEISPAETYLFRQVLSVRCGGIPSQAARITSLARDDDERFCGLRAIERKMAEVRAR CCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC EEPSLWGCASVGALGFEIAGPDLPVAAAGLGAGIPGYRTASRRVDTVRSPPFGRAGYAAQ CCCCCCCHHHHCCCCEEECCCCCCCHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCC AHTEHAL CCCCCCC >Mature Secondary Structure MLPNFEISPAETYLFRQVLSVRCGGIPSQAARITSLARDDDERFCGLRAIERKMAEVRAR CCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC EEPSLWGCASVGALGFEIAGPDLPVAAAGLGAGIPGYRTASRRVDTVRSPPFGRAGYAAQ CCCCCCCHHHHCCCCEEECCCCCCCHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCC AHTEHAL CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA