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The map label for this gene is yfjD [H]

Identifier: 89054974

GI number: 89054974

Start: 2478732

End: 2480060

Strand: Reverse

Name: yfjD [H]

Synonym: Jann_2483

Alternate gene names: 89054974

Gene position: 2480060-2478732 (Counterclockwise)

Preceding gene: 89054975

Following gene: 89054973

Centisome position: 57.44

GC content: 62.15

Gene sequence:

>1329_bases
ATGGAAAACGATATCCCCTTCTTCAACACCGCCGCCTTTCAGGAGCCGACCACTTGGATCGTCGCCGGTGTCATCCTCGC
CCTGCTGGTCTTCTCGGGCTTCTTTTCGGGCTCCGAGACGGCGCTGACGGCGGCCTCCCGTGGCAAATTGCGCTCCATCG
CCGGTAAGGAGGAGGGGCCAGCCAAAGGCGCGGGCAAGGCGCTGGAGCTGAAAGAGGATAATGAACGCCTGATCGGTGGA
ATCCTTCTGGGCAACAATCTGGTGAACATTCTGGCCACGGCTTTGGCCACGTCGCTTCTGACGACGTTGTTCGGCGAAGG
GGGCATTGCGATTGCGACCTTCGTGATGACGATGCTGATCCTGATCTTCGCCGAGGTCCTGCCCAAGACCTATGCGATCA
ACAACCCCGAGACCTCTGCCGCGCGCGTGGCCCGACCCATCGGTCTGATCGTCTCCGTCATGGCACCGGTCGTGGCGGTT
GTGCGCTTCATCGTGCGGGGCGTGCTGCGGCTCTTTGGCACCCGGATCGAGGCGGGGGACAACATGTTGTCCGTGAAGGA
AGAGATCATGGGCGCGCTGTCCATCGGCCATGAAGAGGGCTCGGTCGAGAAGGAACAGCGCGACCGCCTTCTGGGCGCGC
TTGACCTGCATGAGCGGACGGTGGAAGAGATCATGCTGCACCGCTCGGGCATCGAGATGATTGATGCGGACGCCGACCCG
CAGGAAATCCTGTCTCAGGCCCTGCAATCGCCCCACACGCGCCTGCCGGTGTTCCGCGACGATTCCGAGAATATTGTCGG
TGTGGTTCACGCCAAGGACCTCTTGCGCGCCATTGATCGGCTGACCCGTGGCAGCGATGCGCCGGGGTTGAGCGGGTTTG
ACATCGCCGATGTGGCGATGAAGCCCTATTTCGTGCCCGAGACCACGACACTTGATGACCAGATGCGCCAGTTCCTGCGC
CGTCACACGCATTTTGCCCTGGTGGTAGATGAATATGGCGCGTTGGGCGGGTTGATCACGCTGGAGGATATCCTGGAAGA
GATCGTGGGTGAGATCACCGATGAATTCGACACGCCCGACGCGCCCGTTCTGAAGGCCGATCCGGCGGGGAATTTCACCA
TCGACGGGGCGATGACGATCCGCGATCTCAACCGCGCGACCGACTGGACCCTGCCCGATGAGGAGGCCAATACCGTGGCA
GGTCTGGTGATCCATGAGGCGCAGACGATCCCGCTGCCCGGGCAATGCTTCGCTTTCCACGGCTTCCGATTCGAGGTCGC
GGAGCGGGAGCAGAACCGCCTGACCAAGCTGAAGGTCCGGCGGCTGTGA

Upstream 100 bases:

>100_bases
GCGCCAGTTGGTCCTGGACCATCATCCCCTGGCGCGGTGAGCGTCCCGGAGACCGCCTGCACCCCTTGAACGGCCTGCCC
CGCACGCCCATAACCAACCT

Downstream 100 bases:

>100_bases
TTCAGGCTGCTCAAACTTGAGCAAGGCGTCAAGAGACTGAAATATAACGAAACAAGTGTTAACGGGCGTGTGCGCAGTGC
GCTGCGGGCACGCGCCGGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 442; Mature: 442

Protein sequence:

>442_residues
MENDIPFFNTAAFQEPTTWIVAGVILALLVFSGFFSGSETALTAASRGKLRSIAGKEEGPAKGAGKALELKEDNERLIGG
ILLGNNLVNILATALATSLLTTLFGEGGIAIATFVMTMLILIFAEVLPKTYAINNPETSAARVARPIGLIVSVMAPVVAV
VRFIVRGVLRLFGTRIEAGDNMLSVKEEIMGALSIGHEEGSVEKEQRDRLLGALDLHERTVEEIMLHRSGIEMIDADADP
QEILSQALQSPHTRLPVFRDDSENIVGVVHAKDLLRAIDRLTRGSDAPGLSGFDIADVAMKPYFVPETTTLDDQMRQFLR
RHTHFALVVDEYGALGGLITLEDILEEIVGEITDEFDTPDAPVLKADPAGNFTIDGAMTIRDLNRATDWTLPDEEANTVA
GLVIHEAQTIPLPGQCFAFHGFRFEVAEREQNRLTKLKVRRL

Sequences:

>Translated_442_residues
MENDIPFFNTAAFQEPTTWIVAGVILALLVFSGFFSGSETALTAASRGKLRSIAGKEEGPAKGAGKALELKEDNERLIGG
ILLGNNLVNILATALATSLLTTLFGEGGIAIATFVMTMLILIFAEVLPKTYAINNPETSAARVARPIGLIVSVMAPVVAV
VRFIVRGVLRLFGTRIEAGDNMLSVKEEIMGALSIGHEEGSVEKEQRDRLLGALDLHERTVEEIMLHRSGIEMIDADADP
QEILSQALQSPHTRLPVFRDDSENIVGVVHAKDLLRAIDRLTRGSDAPGLSGFDIADVAMKPYFVPETTTLDDQMRQFLR
RHTHFALVVDEYGALGGLITLEDILEEIVGEITDEFDTPDAPVLKADPAGNFTIDGAMTIRDLNRATDWTLPDEEANTVA
GLVIHEAQTIPLPGQCFAFHGFRFEVAEREQNRLTKLKVRRL
>Mature_442_residues
MENDIPFFNTAAFQEPTTWIVAGVILALLVFSGFFSGSETALTAASRGKLRSIAGKEEGPAKGAGKALELKEDNERLIGG
ILLGNNLVNILATALATSLLTTLFGEGGIAIATFVMTMLILIFAEVLPKTYAINNPETSAARVARPIGLIVSVMAPVVAV
VRFIVRGVLRLFGTRIEAGDNMLSVKEEIMGALSIGHEEGSVEKEQRDRLLGALDLHERTVEEIMLHRSGIEMIDADADP
QEILSQALQSPHTRLPVFRDDSENIVGVVHAKDLLRAIDRLTRGSDAPGLSGFDIADVAMKPYFVPETTTLDDQMRQFLR
RHTHFALVVDEYGALGGLITLEDILEEIVGEITDEFDTPDAPVLKADPAGNFTIDGAMTIRDLNRATDWTLPDEEANTVA
GLVIHEAQTIPLPGQCFAFHGFRFEVAEREQNRLTKLKVRRL

Specific function: Unknown

COG id: COG4536

COG function: function code P; Putative Mg2+ and Co2+ transporter CorB

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=420, Percent_Identity=27.1428571428571, Blast_Score=123, Evalue=3e-28,
Organism=Homo sapiens, GI94681046, Length=358, Percent_Identity=30.4469273743017, Blast_Score=108, Evalue=7e-24,
Organism=Homo sapiens, GI40068053, Length=351, Percent_Identity=29.0598290598291, Blast_Score=96, Evalue=6e-20,
Organism=Homo sapiens, GI40068055, Length=351, Percent_Identity=29.0598290598291, Blast_Score=96, Evalue=7e-20,
Organism=Homo sapiens, GI40068051, Length=309, Percent_Identity=28.1553398058252, Blast_Score=80, Evalue=5e-15,
Organism=Escherichia coli, GI145693175, Length=412, Percent_Identity=35.9223300970874, Blast_Score=235, Evalue=4e-63,
Organism=Escherichia coli, GI1790664, Length=434, Percent_Identity=25.8064516129032, Blast_Score=139, Evalue=5e-34,
Organism=Escherichia coli, GI1786879, Length=255, Percent_Identity=30.9803921568627, Blast_Score=120, Evalue=1e-28,
Organism=Escherichia coli, GI87082033, Length=253, Percent_Identity=32.0158102766798, Blast_Score=119, Evalue=5e-28,
Organism=Escherichia coli, GI1788119, Length=279, Percent_Identity=29.0322580645161, Blast_Score=94, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI71980512, Length=362, Percent_Identity=24.0331491712707, Blast_Score=81, Evalue=1e-15,
Organism=Saccharomyces cerevisiae, GI6324512, Length=356, Percent_Identity=25.2808988764045, Blast_Score=68, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 48163; Mature: 48163

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENDIPFFNTAAFQEPTTWIVAGVILALLVFSGFFSGSETALTAASRGKLRSIAGKEEGP
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHEEHHHCCHHHHHCCCCCCC
AKGAGKALELKEDNERLIGGILLGNNLVNILATALATSLLTTLFGEGGIAIATFVMTMLI
CCCCCCEEEECCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
LIFAEVLPKTYAINNPETSAARVARPIGLIVSVMAPVVAVVRFIVRGVLRLFGTRIEAGD
HHHHHHHCHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCC
NMLSVKEEIMGALSIGHEEGSVEKEQRDRLLGALDLHERTVEEIMLHRSGIEMIDADADP
CHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCH
QEILSQALQSPHTRLPVFRDDSENIVGVVHAKDLLRAIDRLTRGSDAPGLSGFDIADVAM
HHHHHHHHHCCCCCCCEEECCCCCEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH
KPYFVPETTTLDDQMRQFLRRHTHFALVVDEYGALGGLITLEDILEEIVGEITDEFDTPD
CCEECCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCEEHHHHHHHHHHHHHHHCCCCC
APVLKADPAGNFTIDGAMTIRDLNRATDWTLPDEEANTVAGLVIHEAQTIPLPGQCFAFH
CCEEEECCCCCEEECCEEEEHHHHHCCCCCCCCCCCCHHHEEEEECCCCCCCCCCEEEEC
GFRFEVAEREQNRLTKLKVRRL
CEEEEHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MENDIPFFNTAAFQEPTTWIVAGVILALLVFSGFFSGSETALTAASRGKLRSIAGKEEGP
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHEEHHHCCHHHHHCCCCCCC
AKGAGKALELKEDNERLIGGILLGNNLVNILATALATSLLTTLFGEGGIAIATFVMTMLI
CCCCCCEEEECCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
LIFAEVLPKTYAINNPETSAARVARPIGLIVSVMAPVVAVVRFIVRGVLRLFGTRIEAGD
HHHHHHHCHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCC
NMLSVKEEIMGALSIGHEEGSVEKEQRDRLLGALDLHERTVEEIMLHRSGIEMIDADADP
CHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCH
QEILSQALQSPHTRLPVFRDDSENIVGVVHAKDLLRAIDRLTRGSDAPGLSGFDIADVAM
HHHHHHHHHCCCCCCCEEECCCCCEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH
KPYFVPETTTLDDQMRQFLRRHTHFALVVDEYGALGGLITLEDILEEIVGEITDEFDTPD
CCEECCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCEEHHHHHHHHHHHHHHHCCCCC
APVLKADPAGNFTIDGAMTIRDLNRATDWTLPDEEANTVAGLVIHEAQTIPLPGQCFAFH
CCEEEECCCCCEEECCEEEEHHHHHCCCCCCCCCCCCHHHEEEEECCCCCCCCCCEEEEC
GFRFEVAEREQNRLTKLKVRRL
CEEEEHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 3045760 [H]