| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054969
Identifier: 89054969
GI number: 89054969
Start: 2474836
End: 2475150
Strand: Reverse
Name: 89054969
Synonym: Jann_2478
Alternate gene names: NA
Gene position: 2475150-2474836 (Counterclockwise)
Preceding gene: 89054970
Following gene: 89054966
Centisome position: 57.32
GC content: 63.49
Gene sequence:
>315_bases GTGATGTCGTCGGTTCTGTGCTGGCTGGCCTCCATCTTGATGATGGCGGGGTTCAATTCAGCCGCGGCCAATTTCGCCGA ACTCTACCTGTTGGTCACCGTTCTGGCGGCGATCCTGGCCGGGATCGATCCCTATGGCGGCTTTGGCAGGATCTCGGGCC TGCTTCTGGCGCTGACCCTCCTGCAAACCCTGTCCAGCGGGTTCAACCTGCTGCGGCTGGATGCGTATCTGTCGCTCGCC CCGTGGGGCTGTATTCTGCTGCTGGTGATCGCCCTCAGGCAGATCGCGCCGCGTGCACGGAGCCGACAGGGCTGA
Upstream 100 bases:
>100_bases GGCAGATGCCCTTGGGCATCCGCATTCGCATTGTGGGCTCAAACCTCAACGCCGCATGGTTTTCAGGCGCGAATACGTCG GCTGTGCTGATCAGGTCTAC
Downstream 100 bases:
>100_bases GGCGTGGCATTGCCCGCGTCGCTGCAATTGCCATTTGATATCGCAACCGCACGGGTCAGCGATGTTCCGCATACGGGATT TGGGTCAGTGTTGTGGTCGC
Product: putative ABC transporter permease
Products: NA
Alternate protein names: Monosaccharide-Transporting ATPase; ABC Transporter Permease Protein; Permease Component Of ABC Transporter; Simple Sugar Transport System Permease; Ribose ABC Transporter; Permease Component Of Sugar ABC Transport System; ABC Transporter Permease; ABC Sugar Transporter Permease Subunit; Ribose ABC Transporter Permease
Number of amino acids: Translated: 104; Mature: 104
Protein sequence:
>104_residues MMSSVLCWLASILMMAGFNSAAANFAELYLLVTVLAAILAGIDPYGGFGRISGLLLALTLLQTLSSGFNLLRLDAYLSLA PWGCILLLVIALRQIAPRARSRQG
Sequences:
>Translated_104_residues MMSSVLCWLASILMMAGFNSAAANFAELYLLVTVLAAILAGIDPYGGFGRISGLLLALTLLQTLSSGFNLLRLDAYLSLA PWGCILLLVIALRQIAPRARSRQG >Mature_104_residues MMSSVLCWLASILMMAGFNSAAANFAELYLLVTVLAAILAGIDPYGGFGRISGLLLALTLLQTLSSGFNLLRLDAYLSLA PWGCILLLVIALRQIAPRARSRQG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11086; Mature: 11086
Theoretical pI: Translated: 9.31; Mature: 9.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSSVLCWLASILMMAGFNSAAANFAELYLLVTVLAAILAGIDPYGGFGRISGLLLALTL CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH LQTLSSGFNLLRLDAYLSLAPWGCILLLVIALRQIAPRARSRQG HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MMSSVLCWLASILMMAGFNSAAANFAELYLLVTVLAAILAGIDPYGGFGRISGLLLALTL CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH LQTLSSGFNLLRLDAYLSLAPWGCILLLVIALRQIAPRARSRQG HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA