| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is mglA [H]
Identifier: 89054970
GI number: 89054970
Start: 2475147
End: 2476568
Strand: Reverse
Name: mglA [H]
Synonym: Jann_2479
Alternate gene names: 89054970
Gene position: 2476568-2475147 (Counterclockwise)
Preceding gene: 89054971
Following gene: 89054969
Centisome position: 57.35
GC content: 61.46
Gene sequence:
>1422_bases ATGCGGACGACGGCTCAGGCGGCCCATGACCGTGTCGATGCGCGATTGCCGCTGGAGGCCCGGTTTGGGTCCCTGTCGGT CGGCCAACGCCAGCTGGTCGCGATCTGCCGCAGCCTCGCCAAAGACGCGCGGTTGGTTTTCATGGACGAGCCGGGCGCCT CCCTCATCCGGCAGGAGGTCGAGCACCTGTTCCGCGTGGTCCGCCGCCTGAAAGATCAGGGCGTGTCCATCGTATTTGTC AGCCACCGCCTTGATGAGGTGCTTGAGATGGCTGACCGCGTCACCGTCATCCGGGATGGAAAGAAGATCTCCACGATGCC GGCGGCGGATATGACCGAAGACCTGCTGACCCAACACATGATGGGAGAGCGGATTGAGGCGGAATTCCTGACATCCGACA CCGGCGGCGGAGCGAGCGTTCTGGAAGTGCGGGATCTGTCGCGCGCGGGTGCGTTTGACGGGATGACCCTGTCGGGCGGT AATCAGCAGTGCGTCGTCCTGGGCAAATGGCTGGCCACCAATCCCCGGATCCTGATCCTCGACAGCCCGACCATCGGCGT CGACGTCAAGAACGAGAGGTCAATCTACGAGATCGCCCAAGACCGCGCCCGCCAAAAGGTGCCGGTGATTATGATCTCTG ACGAGCTGAATGAGCTGTATTTCAACGCCAACCGAATTTTTCACACGGCCGATGGACAGAGACGGGCGGAATACCGCCCC CTTGAGATCACGCGGGAGGCAATGACAGATGCGATTTGTGCCTGGATGGCTTGGCATCACGGAAGGGGTCTTCTGGTGAT CAGCATCTTTTTGGTGGCGCTGTTCTCCGCCCTGTCGCCGTATTTCTACTCGGCCTCCAATGCGACGGATCTGCTGGAAC CCTACGCTGTCACGACGGTCCTGGCCGCAGGCGTGGTCGTCGTGCTGATATCGGGCGGGCTGAACCTTGCCATCATCGCC ACGGCGAATGCCTCCACGCTGTTGATGGTATGGCTTCTGAACGGTCTGATCTGGCCGGATGTCACGGGCGCAGAGCAGAT TGCGTGGATCGCGTTGGTCTTTGCGGCGGGCCTTGCGCTGTGCGTCGCCATTGGCGTGATCAACGGACGTCTCGTGGCCA TTGTCGGCGTGCATCCGATCCTCGCCACGCTGGAACCCATGACATTGATCAATGGCGTGAACCCGTATCCGACCAATGGC GGCACGCTGTCGGGCCTGCGGGACCCGGTCCTGTTCATCTCGAACGGACCGATCTTCCACAAGCCCCTGTCGCTGTTCAT CTTTCTGGCCGCCGCTGGCGCGGTGTCCTTCCTTCTGGGGCAGATGCCCTTGGGCATCCGCATTCGCATTGTGGGCTCAA ACCTCAACGCCGCATGGTTTTCAGGCGCGAATACGTCGGCTGTGCTGATCAGGTCTACGTGA
Upstream 100 bases:
>100_bases TTTCAGGATCTGTCCCCGGTTCCGAATTTGAGTGTGTACGAGAATATCGCGCCGGTATTTCCGCGACCGAAATCCCTTTT CGCGGATCAGCAGGGCGCAG
Downstream 100 bases:
>100_bases TGTCGTCGGTTCTGTGCTGGCTGGCCTCCATCTTGATGATGGCGGGGTTCAATTCAGCCGCGGCCAATTTCGCCGAACTC TACCTGTTGGTCACCGTTCT
Product: ABC transporter-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 473; Mature: 473
Protein sequence:
>473_residues MRTTAQAAHDRVDARLPLEARFGSLSVGQRQLVAICRSLAKDARLVFMDEPGASLIRQEVEHLFRVVRRLKDQGVSIVFV SHRLDEVLEMADRVTVIRDGKKISTMPAADMTEDLLTQHMMGERIEAEFLTSDTGGGASVLEVRDLSRAGAFDGMTLSGG NQQCVVLGKWLATNPRILILDSPTIGVDVKNERSIYEIAQDRARQKVPVIMISDELNELYFNANRIFHTADGQRRAEYRP LEITREAMTDAICAWMAWHHGRGLLVISIFLVALFSALSPYFYSASNATDLLEPYAVTTVLAAGVVVVLISGGLNLAIIA TANASTLLMVWLLNGLIWPDVTGAEQIAWIALVFAAGLALCVAIGVINGRLVAIVGVHPILATLEPMTLINGVNPYPTNG GTLSGLRDPVLFISNGPIFHKPLSLFIFLAAAGAVSFLLGQMPLGIRIRIVGSNLNAAWFSGANTSAVLIRST
Sequences:
>Translated_473_residues MRTTAQAAHDRVDARLPLEARFGSLSVGQRQLVAICRSLAKDARLVFMDEPGASLIRQEVEHLFRVVRRLKDQGVSIVFV SHRLDEVLEMADRVTVIRDGKKISTMPAADMTEDLLTQHMMGERIEAEFLTSDTGGGASVLEVRDLSRAGAFDGMTLSGG NQQCVVLGKWLATNPRILILDSPTIGVDVKNERSIYEIAQDRARQKVPVIMISDELNELYFNANRIFHTADGQRRAEYRP LEITREAMTDAICAWMAWHHGRGLLVISIFLVALFSALSPYFYSASNATDLLEPYAVTTVLAAGVVVVLISGGLNLAIIA TANASTLLMVWLLNGLIWPDVTGAEQIAWIALVFAAGLALCVAIGVINGRLVAIVGVHPILATLEPMTLINGVNPYPTNG GTLSGLRDPVLFISNGPIFHKPLSLFIFLAAAGAVSFLLGQMPLGIRIRIVGSNLNAAWFSGANTSAVLIRST >Mature_473_residues MRTTAQAAHDRVDARLPLEARFGSLSVGQRQLVAICRSLAKDARLVFMDEPGASLIRQEVEHLFRVVRRLKDQGVSIVFV SHRLDEVLEMADRVTVIRDGKKISTMPAADMTEDLLTQHMMGERIEAEFLTSDTGGGASVLEVRDLSRAGAFDGMTLSGG NQQCVVLGKWLATNPRILILDSPTIGVDVKNERSIYEIAQDRARQKVPVIMISDELNELYFNANRIFHTADGQRRAEYRP LEITREAMTDAICAWMAWHHGRGLLVISIFLVALFSALSPYFYSASNATDLLEPYAVTTVLAAGVVVVLISGGLNLAIIA TANASTLLMVWLLNGLIWPDVTGAEQIAWIALVFAAGLALCVAIGVINGRLVAIVGVHPILATLEPMTLINGVNPYPTNG GTLSGLRDPVLFISNGPIFHKPLSLFIFLAAAGAVSFLLGQMPLGIRIRIVGSNLNAAWFSGANTSAVLIRST
Specific function: Part of the ABC transporter complex MglABC involved in galactose/methyl galactoside import. Responsible for energy coupling to the transport system [H]
COG id: COG1129
COG function: function code G; ABC-type sugar transport system, ATPase component
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transporter domains [H]
Homologues:
Organism=Escherichia coli, GI1788472, Length=147, Percent_Identity=38.7755102040816, Blast_Score=124, Evalue=1e-29, Organism=Escherichia coli, GI1790190, Length=154, Percent_Identity=38.961038961039, Blast_Score=110, Evalue=2e-25, Organism=Escherichia coli, GI1789991, Length=129, Percent_Identity=37.984496124031, Blast_Score=101, Evalue=1e-22, Organism=Escherichia coli, GI1790525, Length=151, Percent_Identity=31.1258278145695, Blast_Score=95, Evalue=8e-21, Organism=Escherichia coli, GI48995001, Length=119, Percent_Identity=41.1764705882353, Blast_Score=95, Evalue=1e-20, Organism=Escherichia coli, GI1788210, Length=117, Percent_Identity=39.3162393162393, Blast_Score=92, Evalue=1e-19, Organism=Escherichia coli, GI1787792, Length=105, Percent_Identity=40, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI1788897, Length=104, Percent_Identity=37.5, Blast_Score=70, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR015862 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: =3.6.3.17 [H]
Molecular weight: Translated: 51235; Mature: 51235
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTTAQAAHDRVDARLPLEARFGSLSVGQRQLVAICRSLAKDARLVFMDEPGASLIRQEV CCCCHHHHHHCCCCCCCHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHH EHLFRVVRRLKDQGVSIVFVSHRLDEVLEMADRVTVIRDGKKISTMPAADMTEDLLTQHM HHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHEEEEECCCEEECCCCCHHHHHHHHHHH MGERIEAEFLTSDTGGGASVLEVRDLSRAGAFDGMTLSGGNQQCVVLGKWLATNPRILIL HCCCCCCEEEECCCCCCEEEEEEHHHHHCCCCCCEEECCCCCEEEEEEEEECCCCEEEEE DSPTIGVDVKNERSIYEIAQDRARQKVPVIMISDELNELYFNANRIFHTADGQRRAEYRP ECCCEEEEECCCCHHHHHHHHHHHCCCCEEEEECCHHHHEEECCEEEECCCCCCCCCCCC LEITREAMTDAICAWMAWHHGRGLLVISIFLVALFSALSPYFYSASNATDLLEPYAVTTV HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHH LAAGVVVVLISGGLNLAIIATANASTLLMVWLLNGLIWPDVTGAEQIAWIALVFAAGLAL HHHHHEEEEEECCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH CVAIGVINGRLVAIVGVHPILATLEPMTLINGVNPYPTNGGTLSGLRDPVLFISNGPIFH HHHHHHHCCCEEEEEECHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCH KPLSLFIFLAAAGAVSFLLGQMPLGIRIRIVGSNLNAAWFSGANTSAVLIRST HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEECCCCCCEEEEEEC >Mature Secondary Structure MRTTAQAAHDRVDARLPLEARFGSLSVGQRQLVAICRSLAKDARLVFMDEPGASLIRQEV CCCCHHHHHHCCCCCCCHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHH EHLFRVVRRLKDQGVSIVFVSHRLDEVLEMADRVTVIRDGKKISTMPAADMTEDLLTQHM HHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHEEEEECCCEEECCCCCHHHHHHHHHHH MGERIEAEFLTSDTGGGASVLEVRDLSRAGAFDGMTLSGGNQQCVVLGKWLATNPRILIL HCCCCCCEEEECCCCCCEEEEEEHHHHHCCCCCCEEECCCCCEEEEEEEEECCCCEEEEE DSPTIGVDVKNERSIYEIAQDRARQKVPVIMISDELNELYFNANRIFHTADGQRRAEYRP ECCCEEEEECCCCHHHHHHHHHHHCCCCEEEEECCHHHHEEECCEEEECCCCCCCCCCCC LEITREAMTDAICAWMAWHHGRGLLVISIFLVALFSALSPYFYSASNATDLLEPYAVTTV HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHH LAAGVVVVLISGGLNLAIIATANASTLLMVWLLNGLIWPDVTGAEQIAWIALVFAAGLAL HHHHHEEEEEECCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH CVAIGVINGRLVAIVGVHPILATLEPMTLINGVNPYPTNGGTLSGLRDPVLFISNGPIFH HHHHHHHCCCEEEEEECHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCH KPLSLFIFLAAAGAVSFLLGQMPLGIRIRIVGSNLNAAWFSGANTSAVLIRST HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEECCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]