| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is yusQ [H]
Identifier: 89054900
GI number: 89054900
Start: 2410675
End: 2411064
Strand: Direct
Name: yusQ [H]
Synonym: Jann_2409
Alternate gene names: 89054900
Gene position: 2410675-2411064 (Clockwise)
Preceding gene: 89054890
Following gene: 89054902
Centisome position: 55.83
GC content: 55.9
Gene sequence:
>390_bases ATGCCGTTCAACAAACTTCACGTACCTCAAAGCTTGCCTGCGGAAACATGCCGCCAGATCAATGACCTGCTTCACGATAG CCTTGTGGAAACCTGTGGCGTGAACGCCGAGGATTACTTCTGCCTCATCGCCCGATACGCGCCGGACGACATGATCCTGC ACCCGACCTATCTTGGGCAACGGGATGCGGCCCAGACGATCATCATCGACATCACCCTGCTAGCCGGGCGGTCCGACGAT CAAAAGGAGGCGCTTTATAGAGATGTCAGGCAAAGGCTGGCCGCAATCGGCTTTCCACCCGACAACTCCATCCTCTACCT GACGGAGAATGGGCCAATCGACTGGTCGTTCAGCCAAGACGGGTCTGTAAAAAAGGTGCTTGGTCTCTGA
Upstream 100 bases:
>100_bases GACTTTAAAGCAAGGGTGAGTTGCATATTCTGCTGTTTTCCCGACTCTGGGTCAAGAATAGGCTGATCAGGTCGCCTCCC CCAAGCCAAGGACCACGATT
Downstream 100 bases:
>100_bases ACAGGCATCGGGATGTGCCCATGAAAGCTCGACTGGGCCGCAGAGCGGATACAAATCTCTTTCCCAAAACAAGCCGTTAC TGCGCGGCACTGGTCGATGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 129; Mature: 128
Protein sequence:
>129_residues MPFNKLHVPQSLPAETCRQINDLLHDSLVETCGVNAEDYFCLIARYAPDDMILHPTYLGQRDAAQTIIIDITLLAGRSDD QKEALYRDVRQRLAAIGFPPDNSILYLTENGPIDWSFSQDGSVKKVLGL
Sequences:
>Translated_129_residues MPFNKLHVPQSLPAETCRQINDLLHDSLVETCGVNAEDYFCLIARYAPDDMILHPTYLGQRDAAQTIIIDITLLAGRSDD QKEALYRDVRQRLAAIGFPPDNSILYLTENGPIDWSFSQDGSVKKVLGL >Mature_128_residues PFNKLHVPQSLPAETCRQINDLLHDSLVETCGVNAEDYFCLIARYAPDDMILHPTYLGQRDAAQTIIIDITLLAGRSDDQ KEALYRDVRQRLAAIGFPPDNSILYLTENGPIDWSFSQDGSVKKVLGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 4-oxalocrotonate tautomerase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004370 - InterPro: IPR014347 [H]
Pfam domain/function: PF01361 Tautomerase [H]
EC number: NA
Molecular weight: Translated: 14448; Mature: 14316
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFNKLHVPQSLPAETCRQINDLLHDSLVETCGVNAEDYFCLIARYAPDDMILHPTYLGQ CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEECCCCCCC RDAAQTIIIDITLLAGRSDDQKEALYRDVRQRLAAIGFPPDNSILYLTENGPIDWSFSQD CCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCC GSVKKVLGL CCHHHHHCC >Mature Secondary Structure PFNKLHVPQSLPAETCRQINDLLHDSLVETCGVNAEDYFCLIARYAPDDMILHPTYLGQ CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEECCCCCCC RDAAQTIIIDITLLAGRSDDQKEALYRDVRQRLAAIGFPPDNSILYLTENGPIDWSFSQD CCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCC GSVKKVLGL CCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]