| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054902
Identifier: 89054902
GI number: 89054902
Start: 2412178
End: 2412741
Strand: Direct
Name: 89054902
Synonym: Jann_2411
Alternate gene names: NA
Gene position: 2412178-2412741 (Clockwise)
Preceding gene: 89054900
Following gene: 89054903
Centisome position: 55.86
GC content: 61.7
Gene sequence:
>564_bases ATGAATTTAGACAGTTATGAAAGAACCGGATTGCGCGTGTCCCTTGATCTCGTGAACATCGCAACGCCCGGGTCCCGCCG TGGTACACCCCACACCGGGGGGTGCGTGATCGAGGATCTGCACGATCTCCTGAAGGATGACCCCGCGAGTGTCGCGCAAC TGGGCGATGACCATGTTGAAGGGTTCGTGGAACTGGCCCGTCTGCTACACACCGCAATCGACGCGCTGTCCAACGGCCAA GTTGCAACGGCGGCAACTGCGCTGAACCACCTGCTACGGAAGCATCCGGCCACGCCCGAACTGGCCCAGGACCCCGATGG AACGTGGCGGCTGCATCATCACCCCCTTGATGCCGAGCTGGTCCCCATGTGGACGGCGATCTGCGCCGAAGGCCTCGCGC GGGAGATCGGCCATCAGAACGTCCGGCGGTTCGGCATATGCAACGCCCATCGCTGTGATCGCGTCTATTTCGATACGTCG CGCAACGGAACGCGTCAGTATTGCTCGTTGGCCTGCCAGAACAGGGTGAAAGCCGCCGCGTTTCGCGAGCGTCGTGCAAC ATAG
Upstream 100 bases:
>100_bases GCTATGGCCGTTTGTCTGGGTGAAGACTGCATTTGATGTCTTTCGAATAACGCGCAAAAGTGCTTTCATAGGTTATCTTG CATTTTGAGTAACCCGTCAA
Downstream 100 bases:
>100_bases CCCGCACAGGGTGGGGTCCCGAAAGCGTCCGGTCGCCGGATGTCAGCTTCGCCCTGCATGACCCACCTTGGGGAACACCG TGATGCCCTTGTGGAACTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MNLDSYERTGLRVSLDLVNIATPGSRRGTPHTGGCVIEDLHDLLKDDPASVAQLGDDHVEGFVELARLLHTAIDALSNGQ VATAATALNHLLRKHPATPELAQDPDGTWRLHHHPLDAELVPMWTAICAEGLAREIGHQNVRRFGICNAHRCDRVYFDTS RNGTRQYCSLACQNRVKAAAFRERRAT
Sequences:
>Translated_187_residues MNLDSYERTGLRVSLDLVNIATPGSRRGTPHTGGCVIEDLHDLLKDDPASVAQLGDDHVEGFVELARLLHTAIDALSNGQ VATAATALNHLLRKHPATPELAQDPDGTWRLHHHPLDAELVPMWTAICAEGLAREIGHQNVRRFGICNAHRCDRVYFDTS RNGTRQYCSLACQNRVKAAAFRERRAT >Mature_187_residues MNLDSYERTGLRVSLDLVNIATPGSRRGTPHTGGCVIEDLHDLLKDDPASVAQLGDDHVEGFVELARLLHTAIDALSNGQ VATAATALNHLLRKHPATPELAQDPDGTWRLHHHPLDAELVPMWTAICAEGLAREIGHQNVRRFGICNAHRCDRVYFDTS RNGTRQYCSLACQNRVKAAAFRERRAT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20661; Mature: 20661
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLDSYERTGLRVSLDLVNIATPGSRRGTPHTGGCVIEDLHDLLKDDPASVAQLGDDHVE CCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCHHHHH GFVELARLLHTAIDALSNGQVATAATALNHLLRKHPATPELAQDPDGTWRLHHHPLDAEL HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCHH VPMWTAICAEGLAREIGHQNVRRFGICNAHRCDRVYFDTSRNGTRQYCSLACQNRVKAAA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHH FRERRAT HHHHCCC >Mature Secondary Structure MNLDSYERTGLRVSLDLVNIATPGSRRGTPHTGGCVIEDLHDLLKDDPASVAQLGDDHVE CCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCHHHHH GFVELARLLHTAIDALSNGQVATAATALNHLLRKHPATPELAQDPDGTWRLHHHPLDAEL HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCHH VPMWTAICAEGLAREIGHQNVRRFGICNAHRCDRVYFDTSRNGTRQYCSLACQNRVKAAA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHH FRERRAT HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA