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The map label for this gene is mocB [H]

Identifier: 89054897

GI number: 89054897

Start: 2406947

End: 2407858

Strand: Reverse

Name: mocB [H]

Synonym: Jann_2406

Alternate gene names: 89054897

Gene position: 2407858-2406947 (Counterclockwise)

Preceding gene: 89054898

Following gene: 89054896

Centisome position: 55.76

GC content: 64.47

Gene sequence:

>912_bases
ATGAATAAATTCGTCACGCTGGCGGTCTCGTCACTTGCGCTGAGCACGTCTGCCGCCTGGTCCGAGACCGTCGCCGTCAT
CACGCCTTATCTGTCGCAACCCGGCACGCAGGCCTATGTCGAGAGTTTCGAGGCCGCCGCCGCCGCAAATGGCTGGGACG
TGAACGTCATTGATACGGCCGGCGACGTGGCCGCCGTGATCAGCCGCATCGAAGACGCCGTGATCCAGACTGTCGATGCC
ATTGTGATCAACGTCGATCCGGCGCAGGTGAATGTCGGTCTGCTGGCCGCTGCGGATGCCGGTATCCCGGTGGTCGGCAT
GGATGCGGGGTCTGATCCGCTGGTCGCGGTCAATGTCACGTCGAACGGATACGGCATGGCGGCAGAGACATCCGTCTACG
TGGCCAACCGCATCAATGGGCAGGGAAATGTCGTGATGTTCGTGTTTGACGCGTTCCCGCCCGTGCAGCTTCGCGGCGTG
GTTGCGGATGCCGTTTTTGGCAACTTCCCCGATATCGAGGTGCTGGACCGGGTGACGCCTGATGTCTCGGACGGCGGGAT
CGCGGACAGCCGCGCGCGCATGGAAGCGATCCTCGCGGCCAACCCGGAGCCGGGCAGCATTGCCGCCGTCTGGGCCGCCT
GGGATCAGCCTGCCCTGGGCGCACTTCAGGCGATCGAGGATGCGGGGCGCGGCGATGAGGGGATCGTCATCACCGGCATC
GACGCCAACCCACAGGCGCGCGATGCGATTGCAGCCGGAGGCAGTTTCGAGGCCTCCATCGCGCAGGACTTCACCGGGAT
TGGTCAGGCCGCAGCCGATGTCGTCGGGCGTTTGATGGCGGGGGAAGAGGTGCGCGAAAGCGTCATCTATGTGCCCACAA
TGCTGGTCACCTCCGTCAACGCCGCCGAATAG

Upstream 100 bases:

>100_bases
TTGAGCCGGAAAATCCGATTTCTGGTCTGGGAACCTTGCGAAAAACCCTTACAAAATGGCCGCCAAGGCCTTCTGAGAGG
GCCACAAAGGGGAGAGAACC

Downstream 100 bases:

>100_bases
ATCCACCGCGCGACACCGGCGATTTGGTCGGTGTCGCGCAGGCGGCGATCTGCGCCGTTGAGACGATGCAAACCCTGACC
TTCAAACATATGTCGAAGGC

Product: periplasmic binding protein/LacI transcriptional regulator

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MNKFVTLAVSSLALSTSAAWSETVAVITPYLSQPGTQAYVESFEAAAAANGWDVNVIDTAGDVAAVISRIEDAVIQTVDA
IVINVDPAQVNVGLLAAADAGIPVVGMDAGSDPLVAVNVTSNGYGMAAETSVYVANRINGQGNVVMFVFDAFPPVQLRGV
VADAVFGNFPDIEVLDRVTPDVSDGGIADSRARMEAILAANPEPGSIAAVWAAWDQPALGALQAIEDAGRGDEGIVITGI
DANPQARDAIAAGGSFEASIAQDFTGIGQAAADVVGRLMAGEEVRESVIYVPTMLVTSVNAAE

Sequences:

>Translated_303_residues
MNKFVTLAVSSLALSTSAAWSETVAVITPYLSQPGTQAYVESFEAAAAANGWDVNVIDTAGDVAAVISRIEDAVIQTVDA
IVINVDPAQVNVGLLAAADAGIPVVGMDAGSDPLVAVNVTSNGYGMAAETSVYVANRINGQGNVVMFVFDAFPPVQLRGV
VADAVFGNFPDIEVLDRVTPDVSDGGIADSRARMEAILAANPEPGSIAAVWAAWDQPALGALQAIEDAGRGDEGIVITGI
DANPQARDAIAAGGSFEASIAQDFTGIGQAAADVVGRLMAGEEVRESVIYVPTMLVTSVNAAE
>Mature_303_residues
MNKFVTLAVSSLALSTSAAWSETVAVITPYLSQPGTQAYVESFEAAAAANGWDVNVIDTAGDVAAVISRIEDAVIQTVDA
IVINVDPAQVNVGLLAAADAGIPVVGMDAGSDPLVAVNVTSNGYGMAAETSVYVANRINGQGNVVMFVFDAFPPVQLRGV
VADAVFGNFPDIEVLDRVTPDVSDGGIADSRARMEAILAANPEPGSIAAVWAAWDQPALGALQAIEDAGRGDEGIVITGI
DANPQARDAIAAGGSFEASIAQDFTGIGQAAADVVGRLMAGEEVRESVIYVPTMLVTSVNAAE

Specific function: Involved in rhizopine (L-3-O-methyl-scyllo-inosamine) catabolism. Could be involved in its high affinity transport [H]

COG id: COG1879

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: 3940 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 5900 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 1520 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001761 [H]

Pfam domain/function: PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 30920; Mature: 30920

Theoretical pI: Translated: 3.61; Mature: 3.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKFVTLAVSSLALSTSAAWSETVAVITPYLSQPGTQAYVESFEAAAAANGWDVNVIDTA
CCCEEEEEEHHHHHHCCCCHHCEEEEEEHHHCCCCHHHHHHHHHHHHCCCCCEEEEEECC
GDVAAVISRIEDAVIQTVDAIVINVDPAQVNVGLLAAADAGIPVVGMDAGSDPLVAVNVT
HHHHHHHHHHHHHHHHEEEEEEEECCHHHEEEEEEEECCCCCCEEEECCCCCCEEEEEEE
SNGYGMAAETSVYVANRINGQGNVVMFVFDAFPPVQLRGVVADAVFGNFPDIEVLDRVTP
CCCCCCEECCEEEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHCCC
DVSDGGIADSRARMEAILAANPEPGSIAAVWAAWDQPALGALQAIEDAGRGDEGIVITGI
CCCCCCCCCHHHHHEEEEECCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCEEEEEC
DANPQARDAIAAGGSFEASIAQDFTGIGQAAADVVGRLMAGEEVRESVIYVPTMLVTSVN
CCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHEEEECHHEEECCC
AAE
CCC
>Mature Secondary Structure
MNKFVTLAVSSLALSTSAAWSETVAVITPYLSQPGTQAYVESFEAAAAANGWDVNVIDTA
CCCEEEEEEHHHHHHCCCCHHCEEEEEEHHHCCCCHHHHHHHHHHHHCCCCCEEEEEECC
GDVAAVISRIEDAVIQTVDAIVINVDPAQVNVGLLAAADAGIPVVGMDAGSDPLVAVNVT
HHHHHHHHHHHHHHHHEEEEEEEECCHHHEEEEEEEECCCCCCEEEECCCCCCEEEEEEE
SNGYGMAAETSVYVANRINGQGNVVMFVFDAFPPVQLRGVVADAVFGNFPDIEVLDRVTP
CCCCCCEECCEEEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHCCC
DVSDGGIADSRARMEAILAANPEPGSIAAVWAAWDQPALGALQAIEDAGRGDEGIVITGI
CCCCCCCCCHHHHHEEEEECCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCEEEEEC
DANPQARDAIAAGGSFEASIAQDFTGIGQAAADVVGRLMAGEEVRESVIYVPTMLVTSVN
CCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHEEEECHHEEECCC
AAE
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7845353 [H]