| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054881
Identifier: 89054881
GI number: 89054881
Start: 2392464
End: 2392835
Strand: Direct
Name: 89054881
Synonym: Jann_2390
Alternate gene names: NA
Gene position: 2392464-2392835 (Clockwise)
Preceding gene: 89054880
Following gene: 89054882
Centisome position: 55.41
GC content: 64.52
Gene sequence:
>372_bases ATGACCGCCATCGACTATATCAACTTCGCCTTGGCCATCACCACGATTGGCTTGGGGCTTTGCGGCTGGCTTGCCACCCG TTGGACCATGTCCGCCCTGGATATGCAGGCCGGCCCGTCCAACATGGCGTTCACGGAGGTGTCCGGTGTCTCGGGCTGCC TTTTTGTCGGCATGGGCCTGGCGGTGATGGTGCTGAACGATCCGGTGGCCTGGGTAATCCTGGGCGCGGCCTATGCGGGG GCGGCCCTGGGGCGGGTCACGTCGATCCTGCGCGATGATGCGAGTTTCCGCAAAAGCTGGACGTTCTTTGGCACAGAGGC GGCCTTTGCGGCATGGCTTGTGCTGGCCAACCTGCCGGGCGCCCAGGCGTGA
Upstream 100 bases:
>100_bases ACGCGCGCATCCCCTGACCGTTTTTTCCGTTGAAAGTGATCCGTCCACTGTCCCCATGCGTTAAAGCCGTACCTGACATC CATTAAGGTTCGGACCGCAC
Downstream 100 bases:
>100_bases GGCCTGCAAACCGCGTCTTTCATCCGCTGGCGAATCTCGTACAGTAACCGCAAGTGCTCCAACCGTCTGGCCCCGCTGCT ATGTCTGACCTCACCACGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 123; Mature: 122
Protein sequence:
>123_residues MTAIDYINFALAITTIGLGLCGWLATRWTMSALDMQAGPSNMAFTEVSGVSGCLFVGMGLAVMVLNDPVAWVILGAAYAG AALGRVTSILRDDASFRKSWTFFGTEAAFAAWLVLANLPGAQA
Sequences:
>Translated_123_residues MTAIDYINFALAITTIGLGLCGWLATRWTMSALDMQAGPSNMAFTEVSGVSGCLFVGMGLAVMVLNDPVAWVILGAAYAG AALGRVTSILRDDASFRKSWTFFGTEAAFAAWLVLANLPGAQA >Mature_122_residues TAIDYINFALAITTIGLGLCGWLATRWTMSALDMQAGPSNMAFTEVSGVSGCLFVGMGLAVMVLNDPVAWVILGAAYAGA ALGRVTSILRDDASFRKSWTFFGTEAAFAAWLVLANLPGAQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12870; Mature: 12739
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAIDYINFALAITTIGLGLCGWLATRWTMSALDMQAGPSNMAFTEVSGVSGCLFVGMGL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHH AVMVLNDPVAWVILGAAYAGAALGRVTSILRDDASFRKSWTFFGTEAAFAAWLVLANLPG EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHCCCC AQA CCC >Mature Secondary Structure TAIDYINFALAITTIGLGLCGWLATRWTMSALDMQAGPSNMAFTEVSGVSGCLFVGMGL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHH AVMVLNDPVAWVILGAAYAGAALGRVTSILRDDASFRKSWTFFGTEAAFAAWLVLANLPG EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHCCCC AQA CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA