| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054882
Identifier: 89054882
GI number: 89054882
Start: 2392916
End: 2393404
Strand: Direct
Name: 89054882
Synonym: Jann_2391
Alternate gene names: NA
Gene position: 2392916-2393404 (Clockwise)
Preceding gene: 89054881
Following gene: 89054883
Centisome position: 55.42
GC content: 60.12
Gene sequence:
>489_bases ATGTCTGACCTCACCACGACCATTCCCTATGGCCGCCTCATGCATGAGGCCGTGTGTGGTGTGATCCGGGACGTTCTGGA CGGTGTCGCCAAGTCCGGTCTGCCCGGCGAGCATCACTTCTTCATCACCTTTGACACGCAGCACGCGGATGTGGATCTGG CCGATTGGCTGCGCGAACGCTACCCCGAAGAGATGATGATCGTGATCCAGAACTGGTATGACGATTTGCAGGTCGACAAT GATGGCTTCTCCATCACACTGAATTTTGGCGACGCGCCCGAGCGGTTGCGCATTCCCTTCGATTCCATTGCCACCTTTGT CGACCCCTCGGTCGAATTCGGCTGGCGGTTTGAGCAAACCGAAGATGACGACGATCCGACGCCGCCCGATGGCCCCGACG CGCCCGACGATGACGCAGACAGCGACGACGACGGGTCGGAGCGAGAGGCCGAGGTCGTGAGCCTCGATACCTTCCGCCGC AATCACTGA
Upstream 100 bases:
>100_bases TGCCGGGCGCCCAGGCGTGAGGCCTGCAAACCGCGTCTTTCATCCGCTGGCGAATCTCGTACAGTAACCGCAAGTGCTCC AACCGTCTGGCCCCGCTGCT
Downstream 100 bases:
>100_bases CATCCGGGACATTCAGACCATGGCGTCCAGCGACTTCGCGCTCTTCATGGGCCAGCTTCTGCGCAAGCCCCATCAGGTTG TGGCGCTGGCCCCATCGTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MSDLTTTIPYGRLMHEAVCGVIRDVLDGVAKSGLPGEHHFFITFDTQHADVDLADWLRERYPEEMMIVIQNWYDDLQVDN DGFSITLNFGDAPERLRIPFDSIATFVDPSVEFGWRFEQTEDDDDPTPPDGPDAPDDDADSDDDGSEREAEVVSLDTFRR NH
Sequences:
>Translated_162_residues MSDLTTTIPYGRLMHEAVCGVIRDVLDGVAKSGLPGEHHFFITFDTQHADVDLADWLRERYPEEMMIVIQNWYDDLQVDN DGFSITLNFGDAPERLRIPFDSIATFVDPSVEFGWRFEQTEDDDDPTPPDGPDAPDDDADSDDDGSEREAEVVSLDTFRR NH >Mature_161_residues SDLTTTIPYGRLMHEAVCGVIRDVLDGVAKSGLPGEHHFFITFDTQHADVDLADWLRERYPEEMMIVIQNWYDDLQVDND GFSITLNFGDAPERLRIPFDSIATFVDPSVEFGWRFEQTEDDDDPTPPDGPDAPDDDADSDDDGSEREAEVVSLDTFRRN H
Specific function: Unknown
COG id: COG3814
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18396; Mature: 18265
Theoretical pI: Translated: 3.80; Mature: 3.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDLTTTIPYGRLMHEAVCGVIRDVLDGVAKSGLPGEHHFFITFDTQHADVDLADWLRER CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHH YPEEMMIVIQNWYDDLQVDNDGFSITLNFGDAPERLRIPFDSIATFVDPSVEFGWRFEQT CCHHHHHHHHHHHCCEEECCCCEEEEEECCCCCCEEECCHHHHHHHCCCCCCCCEEECCC EDDDDPTPPDGPDAPDDDADSDDDGSEREAEVVSLDTFRRNH CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEHHHHCCCC >Mature Secondary Structure SDLTTTIPYGRLMHEAVCGVIRDVLDGVAKSGLPGEHHFFITFDTQHADVDLADWLRER CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHH YPEEMMIVIQNWYDDLQVDNDGFSITLNFGDAPERLRIPFDSIATFVDPSVEFGWRFEQT CCHHHHHHHHHHHCCEEECCCCEEEEEECCCCCCEEECCHHHHHHHCCCCCCCCEEECCC EDDDDPTPPDGPDAPDDDADSDDDGSEREAEVVSLDTFRRNH CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA