Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89054882

Identifier: 89054882

GI number: 89054882

Start: 2392916

End: 2393404

Strand: Direct

Name: 89054882

Synonym: Jann_2391

Alternate gene names: NA

Gene position: 2392916-2393404 (Clockwise)

Preceding gene: 89054881

Following gene: 89054883

Centisome position: 55.42

GC content: 60.12

Gene sequence:

>489_bases
ATGTCTGACCTCACCACGACCATTCCCTATGGCCGCCTCATGCATGAGGCCGTGTGTGGTGTGATCCGGGACGTTCTGGA
CGGTGTCGCCAAGTCCGGTCTGCCCGGCGAGCATCACTTCTTCATCACCTTTGACACGCAGCACGCGGATGTGGATCTGG
CCGATTGGCTGCGCGAACGCTACCCCGAAGAGATGATGATCGTGATCCAGAACTGGTATGACGATTTGCAGGTCGACAAT
GATGGCTTCTCCATCACACTGAATTTTGGCGACGCGCCCGAGCGGTTGCGCATTCCCTTCGATTCCATTGCCACCTTTGT
CGACCCCTCGGTCGAATTCGGCTGGCGGTTTGAGCAAACCGAAGATGACGACGATCCGACGCCGCCCGATGGCCCCGACG
CGCCCGACGATGACGCAGACAGCGACGACGACGGGTCGGAGCGAGAGGCCGAGGTCGTGAGCCTCGATACCTTCCGCCGC
AATCACTGA

Upstream 100 bases:

>100_bases
TGCCGGGCGCCCAGGCGTGAGGCCTGCAAACCGCGTCTTTCATCCGCTGGCGAATCTCGTACAGTAACCGCAAGTGCTCC
AACCGTCTGGCCCCGCTGCT

Downstream 100 bases:

>100_bases
CATCCGGGACATTCAGACCATGGCGTCCAGCGACTTCGCGCTCTTCATGGGCCAGCTTCTGCGCAAGCCCCATCAGGTTG
TGGCGCTGGCCCCATCGTCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 162; Mature: 161

Protein sequence:

>162_residues
MSDLTTTIPYGRLMHEAVCGVIRDVLDGVAKSGLPGEHHFFITFDTQHADVDLADWLRERYPEEMMIVIQNWYDDLQVDN
DGFSITLNFGDAPERLRIPFDSIATFVDPSVEFGWRFEQTEDDDDPTPPDGPDAPDDDADSDDDGSEREAEVVSLDTFRR
NH

Sequences:

>Translated_162_residues
MSDLTTTIPYGRLMHEAVCGVIRDVLDGVAKSGLPGEHHFFITFDTQHADVDLADWLRERYPEEMMIVIQNWYDDLQVDN
DGFSITLNFGDAPERLRIPFDSIATFVDPSVEFGWRFEQTEDDDDPTPPDGPDAPDDDADSDDDGSEREAEVVSLDTFRR
NH
>Mature_161_residues
SDLTTTIPYGRLMHEAVCGVIRDVLDGVAKSGLPGEHHFFITFDTQHADVDLADWLRERYPEEMMIVIQNWYDDLQVDND
GFSITLNFGDAPERLRIPFDSIATFVDPSVEFGWRFEQTEDDDDPTPPDGPDAPDDDADSDDDGSEREAEVVSLDTFRRN
H

Specific function: Unknown

COG id: COG3814

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18396; Mature: 18265

Theoretical pI: Translated: 3.80; Mature: 3.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDLTTTIPYGRLMHEAVCGVIRDVLDGVAKSGLPGEHHFFITFDTQHADVDLADWLRER
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHH
YPEEMMIVIQNWYDDLQVDNDGFSITLNFGDAPERLRIPFDSIATFVDPSVEFGWRFEQT
CCHHHHHHHHHHHCCEEECCCCEEEEEECCCCCCEEECCHHHHHHHCCCCCCCCEEECCC
EDDDDPTPPDGPDAPDDDADSDDDGSEREAEVVSLDTFRRNH
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEHHHHCCCC
>Mature Secondary Structure 
SDLTTTIPYGRLMHEAVCGVIRDVLDGVAKSGLPGEHHFFITFDTQHADVDLADWLRER
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHH
YPEEMMIVIQNWYDDLQVDNDGFSITLNFGDAPERLRIPFDSIATFVDPSVEFGWRFEQT
CCHHHHHHHHHHHCCEEECCCCEEEEEECCCCCCEEECCHHHHHHHCCCCCCCCEEECCC
EDDDDPTPPDGPDAPDDDADSDDDGSEREAEVVSLDTFRRNH
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA