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The map label for this gene is 89054880

Identifier: 89054880

GI number: 89054880

Start: 2391229

End: 2391906

Strand: Direct

Name: 89054880

Synonym: Jann_2389

Alternate gene names: NA

Gene position: 2391229-2391906 (Clockwise)

Preceding gene: 89054878

Following gene: 89054881

Centisome position: 55.38

GC content: 63.72

Gene sequence:

>678_bases
ATGTATACAGATATACTTATTGGACGGTCACCGCAACGAGAACGCCCCCGAAAGCCCTGTCAGATGCCGAAACACAACGC
CGACTCAATCGCCGACGCCCTGCGCAAACGTATTTGTCTGGAGCCCCCGACCGCAAGCCTCGTTCTGCATGAGCAGGCCC
TGGCGGAAGAGTTCGAGGTGTCGCGCACACCCGTGCGGCAGGCCTTGCAACGCCTGGCCTATGAACGCCTTGTGGAGGTT
CGCTCGGGCGTCGGGACCGTGATCTCCCCCCTGAAGGAGGATGGGCGCGAGATGGATATCAACCTCGCCTCCGCCCTGCT
GGATGTGGCCGCCGACATCGAGGGCGACCGCGCCCTGTCCATCGAGTCGAACGCATTCATCATCGCGTTGGAGCAACAGG
TCAGCGCGGCGACCGCCCTGGATCTGGACACGAATTACACCATCCGCTCCACGTTGATGGGGATCGTCACCCGCGAAATG
TCCAATGATATCCTGGCAGAGGCGCTCAAGGCGGCACTTTGGCGGTTGTTTCGCTGGCGTATGGCGGATGCGGCGGCCGA
GCCGTCGGGCATTGACGCACGCCTGCGCGAGGTGATCGAGCGGATGGCGGCCGCCACCAAGGTCGGCACGGTCCGCGCGC
TTTTGCAGGCGCAGCATTCCCCCTCCGCGCCCGACTGA

Upstream 100 bases:

>100_bases
GACCCCGGCAGCAACGTGGACACGGAGGCCCCATCAGACCCTGCGTCTTGCGCGGCGTGAGGGGCGGGCGATTGAGTCAT
CGGATTGCTTTCCATAAGAG

Downstream 100 bases:

>100_bases
TCGGATCACCGTCAACCGCGCGGCTCCATCAACCCAATGGCACGGACCCATGGGCCAGACCTTGAATCCAACGCCCGCCC
CTCGTATATCTAGCGTGTTC

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator GntR Family

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MYTDILIGRSPQRERPRKPCQMPKHNADSIADALRKRICLEPPTASLVLHEQALAEEFEVSRTPVRQALQRLAYERLVEV
RSGVGTVISPLKEDGREMDINLASALLDVAADIEGDRALSIESNAFIIALEQQVSAATALDLDTNYTIRSTLMGIVTREM
SNDILAEALKAALWRLFRWRMADAAAEPSGIDARLREVIERMAAATKVGTVRALLQAQHSPSAPD

Sequences:

>Translated_225_residues
MYTDILIGRSPQRERPRKPCQMPKHNADSIADALRKRICLEPPTASLVLHEQALAEEFEVSRTPVRQALQRLAYERLVEV
RSGVGTVISPLKEDGREMDINLASALLDVAADIEGDRALSIESNAFIIALEQQVSAATALDLDTNYTIRSTLMGIVTREM
SNDILAEALKAALWRLFRWRMADAAAEPSGIDARLREVIERMAAATKVGTVRALLQAQHSPSAPD
>Mature_225_residues
MYTDILIGRSPQRERPRKPCQMPKHNADSIADALRKRICLEPPTASLVLHEQALAEEFEVSRTPVRQALQRLAYERLVEV
RSGVGTVISPLKEDGREMDINLASALLDVAADIEGDRALSIESNAFIIALEQQVSAATALDLDTNYTIRSTLMGIVTREM
SNDILAEALKAALWRLFRWRMADAAAEPSGIDARLREVIERMAAATKVGTVRALLQAQHSPSAPD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24826; Mature: 24826

Theoretical pI: Translated: 5.43; Mature: 5.43

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYTDILIGRSPQRERPRKPCQMPKHNADSIADALRKRICLEPPTASLVLHEQALAEEFEV
CCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHC
SRTPVRQALQRLAYERLVEVRSGVGTVISPLKEDGREMDINLASALLDVAADIEGDRALS
CHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEE
IESNAFIIALEQQVSAATALDLDTNYTIRSTLMGIVTREMSNDILAEALKAALWRLFRWR
EECCEEEEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MADAAAEPSGIDARLREVIERMAAATKVGTVRALLQAQHSPSAPD
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MYTDILIGRSPQRERPRKPCQMPKHNADSIADALRKRICLEPPTASLVLHEQALAEEFEV
CCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHC
SRTPVRQALQRLAYERLVEVRSGVGTVISPLKEDGREMDINLASALLDVAADIEGDRALS
CHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEE
IESNAFIIALEQQVSAATALDLDTNYTIRSTLMGIVTREMSNDILAEALKAALWRLFRWR
EECCEEEEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MADAAAEPSGIDARLREVIERMAAATKVGTVRALLQAQHSPSAPD
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA