| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054816
Identifier: 89054816
GI number: 89054816
Start: 2330782
End: 2331357
Strand: Direct
Name: 89054816
Synonym: Jann_2325
Alternate gene names: NA
Gene position: 2330782-2331357 (Clockwise)
Preceding gene: 89054815
Following gene: 89054817
Centisome position: 53.98
GC content: 66.67
Gene sequence:
>576_bases ATGGCAGATGGTCTTCCCACCGCTTCGCTTTCCCGGCGGTCTCTTCTCCTCGGCGCGGGATCTCTCCCGCTTCTCGCAGC CTGCGGCAACCCGATTGGGAACTCCAACGCGCCGCGCATTGACAGCCGCGTGGATGCGGCGATCGCGTTCATGCAGCAGG AGGTTCCGGGCACAGCCGATCTGGTGAGCCAGGCGTCGGGCATGTTGGTGATGCCCCTGATCTCGGAGGCGGGGTTCGGC ATTGGCGGCAGCTACGGGCGCGGTGCGCTGCGGGTGGGCGGCGCGACGGTGGATTACTATTCCGCCGTGTCGGGCAGCTT CGGCTTGCAGATCGGCGCGCAGCAATACGCCCACACCCTGTTTTTCATGACCCCGGGGGCGCTGGCCGAGTTCCGCAATT CGGTGGGCTGGTCGGTGGGCGGCGACATCCGCTACGCCGTCAACACCGATGCGGGCACGTTGGGCTTCGACACTGCCACC TTGGCCGATCCGGTGATTGCCGTGATCTACGGGCAAGCGGGCCTGATCATCGGCGCGACGCTGGACGGCACGCGCTATAC GCGGATCATCCCCTGA
Upstream 100 bases:
>100_bases GACAGGCCCTGCATTTCGGCGTATTCTTGCCGCCAAGGATCGGGGCGCAAAGTCCCGGCAATGGCAGTCACACAAGACAC AATATAGGCAAGGTATTCCC
Downstream 100 bases:
>100_bases CGACGCCGATACCAACGCGGCGCTCTCGCAACCGTGACTGGCCGCACTTGTGCGGTCGGTCCATCCTGTGACCTCCAGTC CCCGGAGGTTTCCAATGTTG
Product: twin-arginine translocation pathway signal
Products: NA
Alternate protein names: Twin-Arginine Translocation Pathway Signal
Number of amino acids: Translated: 191; Mature: 190
Protein sequence:
>191_residues MADGLPTASLSRRSLLLGAGSLPLLAACGNPIGNSNAPRIDSRVDAAIAFMQQEVPGTADLVSQASGMLVMPLISEAGFG IGGSYGRGALRVGGATVDYYSAVSGSFGLQIGAQQYAHTLFFMTPGALAEFRNSVGWSVGGDIRYAVNTDAGTLGFDTAT LADPVIAVIYGQAGLIIGATLDGTRYTRIIP
Sequences:
>Translated_191_residues MADGLPTASLSRRSLLLGAGSLPLLAACGNPIGNSNAPRIDSRVDAAIAFMQQEVPGTADLVSQASGMLVMPLISEAGFG IGGSYGRGALRVGGATVDYYSAVSGSFGLQIGAQQYAHTLFFMTPGALAEFRNSVGWSVGGDIRYAVNTDAGTLGFDTAT LADPVIAVIYGQAGLIIGATLDGTRYTRIIP >Mature_190_residues ADGLPTASLSRRSLLLGAGSLPLLAACGNPIGNSNAPRIDSRVDAAIAFMQQEVPGTADLVSQASGMLVMPLISEAGFGI GGSYGRGALRVGGATVDYYSAVSGSFGLQIGAQQYAHTLFFMTPGALAEFRNSVGWSVGGDIRYAVNTDAGTLGFDTATL ADPVIAVIYGQAGLIIGATLDGTRYTRIIP
Specific function: Unknown
COG id: COG2930
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19490; Mature: 19359
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADGLPTASLSRRSLLLGAGSLPLLAACGNPIGNSNAPRIDSRVDAAIAFMQQEVPGTAD CCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHH LVSQASGMLVMPLISEAGFGIGGSYGRGALRVGGATVDYYSAVSGSFGLQIGAQQYAHTL HHHHCCCEEEEEEHHHCCCCCCCCCCCCEEEECCCEEEHHHHCCCCCCEEECHHHHHEEE FFMTPGALAEFRNSVGWSVGGDIRYAVNTDAGTLGFDTATLADPVIAVIYGQAGLIIGAT EEECCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHHHHHCCEEEEEECCCCEEEEEE LDGTRYTRIIP ECCCEEEEECC >Mature Secondary Structure ADGLPTASLSRRSLLLGAGSLPLLAACGNPIGNSNAPRIDSRVDAAIAFMQQEVPGTAD CCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHH LVSQASGMLVMPLISEAGFGIGGSYGRGALRVGGATVDYYSAVSGSFGLQIGAQQYAHTL HHHHCCCEEEEEEHHHCCCCCCCCCCCCEEEECCCEEEHHHHCCCCCCEEECHHHHHEEE FFMTPGALAEFRNSVGWSVGGDIRYAVNTDAGTLGFDTATLADPVIAVIYGQAGLIIGAT EEECCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHHHHHCCEEEEEECCCCEEEEEE LDGTRYTRIIP ECCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA