| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054811
Identifier: 89054811
GI number: 89054811
Start: 2323527
End: 2324267
Strand: Reverse
Name: 89054811
Synonym: Jann_2320
Alternate gene names: NA
Gene position: 2324267-2323527 (Counterclockwise)
Preceding gene: 89054812
Following gene: 89054805
Centisome position: 53.83
GC content: 64.37
Gene sequence:
>741_bases ATGTCCGAGTCTTCCGACCCCAAGCACCGCCCACGCCTTCCTCGTCGCCAGATCCCCAGATGGGGATGGATCGCGTTCCT GCTGTTCTCGGCCCTGTCTGCGGCGTCGGCGTTCAAATTCGTCTTCCCCGGCCTGATCTACGGCGTCTTCGCCCATTGGG GCGAGGGGGTCGCGGCCACCTGGATGGCCTTCGTCGTCGAGGGCATCACCCGGGGGGCGGACCACGTTGCCTATCACATT GAAAATGTGGGCTCGATCCTTGCCGTGCATATGGTGGCGGGGGGGCTGGCCGTCTTGTTGTCGCCCTTGCAGGTCAGCCG CATGTGGCGGCGCGGCGACCGGCGCAAGCATGTCTATCTGGGGTGGGTGATGGTGCCCATCGTCACCATCGGCGCGCTGA CCACGCCGCCGATCAGCTTCAACATGAACTACCCGCTCTGGTCCGAGCTTGGCTTCGCCATGGGGTCCATTGCGTGGTTC GGGGCGCTGGTCATGGGCATCTGGGCGATCAAGACCAAACAATATGTCCGCCACCAGCGCTGGATGGTGATGATGGTGGC GCTCAGCTTCGGGGCGGTGTCGTTCCGGCTGCAACTGCCGATCCTGCGCCTCTTCTGGGATATGCATGTGGTCTTCCCGT ACCTCGGCTGGACCTGCTGGGTGCCCAACGTTCTGGTCGTGGCCTGGTGGTGGCACAGGCAGGCGCGCAAACCGGTGCCC GCAGTACAGCCCGCCGAATAA
Upstream 100 bases:
>100_bases AACGCGGATTGGTAAAGGCGCAGCCGGGTCGCGGCGTCCCATTGCGGGGCAGGCAGGCCCGCGTTAAAAGCGCCCCAGAT GCATCAAAGGCCGCTCTACG
Downstream 100 bases:
>100_bases AGGCGCTGGAACAGGCATGGCCACCCCCTGATGCTATCGCGTATGGGACAGCAACAGGGGGTGATCAACGCTCTCGGGCG AGCTGCTCGAAGAACTCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 246; Mature: 245
Protein sequence:
>246_residues MSESSDPKHRPRLPRRQIPRWGWIAFLLFSALSAASAFKFVFPGLIYGVFAHWGEGVAATWMAFVVEGITRGADHVAYHI ENVGSILAVHMVAGGLAVLLSPLQVSRMWRRGDRRKHVYLGWVMVPIVTIGALTTPPISFNMNYPLWSELGFAMGSIAWF GALVMGIWAIKTKQYVRHQRWMVMMVALSFGAVSFRLQLPILRLFWDMHVVFPYLGWTCWVPNVLVVAWWWHRQARKPVP AVQPAE
Sequences:
>Translated_246_residues MSESSDPKHRPRLPRRQIPRWGWIAFLLFSALSAASAFKFVFPGLIYGVFAHWGEGVAATWMAFVVEGITRGADHVAYHI ENVGSILAVHMVAGGLAVLLSPLQVSRMWRRGDRRKHVYLGWVMVPIVTIGALTTPPISFNMNYPLWSELGFAMGSIAWF GALVMGIWAIKTKQYVRHQRWMVMMVALSFGAVSFRLQLPILRLFWDMHVVFPYLGWTCWVPNVLVVAWWWHRQARKPVP AVQPAE >Mature_245_residues SESSDPKHRPRLPRRQIPRWGWIAFLLFSALSAASAFKFVFPGLIYGVFAHWGEGVAATWMAFVVEGITRGADHVAYHIE NVGSILAVHMVAGGLAVLLSPLQVSRMWRRGDRRKHVYLGWVMVPIVTIGALTTPPISFNMNYPLWSELGFAMGSIAWFG ALVMGIWAIKTKQYVRHQRWMVMMVALSFGAVSFRLQLPILRLFWDMHVVFPYLGWTCWVPNVLVVAWWWHRQARKPVPA VQPAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28040; Mature: 27908
Theoretical pI: Translated: 11.26; Mature: 11.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSESSDPKHRPRLPRRQIPRWGWIAFLLFSALSAASAFKFVFPGLIYGVFAHWGEGVAAT CCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH WMAFVVEGITRGADHVAYHIENVGSILAVHMVAGGLAVLLSPLQVSRMWRRGDRRKHVYL HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE GWVMVPIVTIGALTTPPISFNMNYPLWSELGFAMGSIAWFGALVMGIWAIKTKQYVRHQR HHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WMVMMVALSFGAVSFRLQLPILRLFWDMHVVFPYLGWTCWVPNVLVVAWWWHRQARKPVP HHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC AVQPAE CCCCCC >Mature Secondary Structure SESSDPKHRPRLPRRQIPRWGWIAFLLFSALSAASAFKFVFPGLIYGVFAHWGEGVAAT CCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH WMAFVVEGITRGADHVAYHIENVGSILAVHMVAGGLAVLLSPLQVSRMWRRGDRRKHVYL HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE GWVMVPIVTIGALTTPPISFNMNYPLWSELGFAMGSIAWFGALVMGIWAIKTKQYVRHQR HHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WMVMMVALSFGAVSFRLQLPILRLFWDMHVVFPYLGWTCWVPNVLVVAWWWHRQARKPVP HHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC AVQPAE CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA