Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89054811

Identifier: 89054811

GI number: 89054811

Start: 2323527

End: 2324267

Strand: Reverse

Name: 89054811

Synonym: Jann_2320

Alternate gene names: NA

Gene position: 2324267-2323527 (Counterclockwise)

Preceding gene: 89054812

Following gene: 89054805

Centisome position: 53.83

GC content: 64.37

Gene sequence:

>741_bases
ATGTCCGAGTCTTCCGACCCCAAGCACCGCCCACGCCTTCCTCGTCGCCAGATCCCCAGATGGGGATGGATCGCGTTCCT
GCTGTTCTCGGCCCTGTCTGCGGCGTCGGCGTTCAAATTCGTCTTCCCCGGCCTGATCTACGGCGTCTTCGCCCATTGGG
GCGAGGGGGTCGCGGCCACCTGGATGGCCTTCGTCGTCGAGGGCATCACCCGGGGGGCGGACCACGTTGCCTATCACATT
GAAAATGTGGGCTCGATCCTTGCCGTGCATATGGTGGCGGGGGGGCTGGCCGTCTTGTTGTCGCCCTTGCAGGTCAGCCG
CATGTGGCGGCGCGGCGACCGGCGCAAGCATGTCTATCTGGGGTGGGTGATGGTGCCCATCGTCACCATCGGCGCGCTGA
CCACGCCGCCGATCAGCTTCAACATGAACTACCCGCTCTGGTCCGAGCTTGGCTTCGCCATGGGGTCCATTGCGTGGTTC
GGGGCGCTGGTCATGGGCATCTGGGCGATCAAGACCAAACAATATGTCCGCCACCAGCGCTGGATGGTGATGATGGTGGC
GCTCAGCTTCGGGGCGGTGTCGTTCCGGCTGCAACTGCCGATCCTGCGCCTCTTCTGGGATATGCATGTGGTCTTCCCGT
ACCTCGGCTGGACCTGCTGGGTGCCCAACGTTCTGGTCGTGGCCTGGTGGTGGCACAGGCAGGCGCGCAAACCGGTGCCC
GCAGTACAGCCCGCCGAATAA

Upstream 100 bases:

>100_bases
AACGCGGATTGGTAAAGGCGCAGCCGGGTCGCGGCGTCCCATTGCGGGGCAGGCAGGCCCGCGTTAAAAGCGCCCCAGAT
GCATCAAAGGCCGCTCTACG

Downstream 100 bases:

>100_bases
AGGCGCTGGAACAGGCATGGCCACCCCCTGATGCTATCGCGTATGGGACAGCAACAGGGGGTGATCAACGCTCTCGGGCG
AGCTGCTCGAAGAACTCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 246; Mature: 245

Protein sequence:

>246_residues
MSESSDPKHRPRLPRRQIPRWGWIAFLLFSALSAASAFKFVFPGLIYGVFAHWGEGVAATWMAFVVEGITRGADHVAYHI
ENVGSILAVHMVAGGLAVLLSPLQVSRMWRRGDRRKHVYLGWVMVPIVTIGALTTPPISFNMNYPLWSELGFAMGSIAWF
GALVMGIWAIKTKQYVRHQRWMVMMVALSFGAVSFRLQLPILRLFWDMHVVFPYLGWTCWVPNVLVVAWWWHRQARKPVP
AVQPAE

Sequences:

>Translated_246_residues
MSESSDPKHRPRLPRRQIPRWGWIAFLLFSALSAASAFKFVFPGLIYGVFAHWGEGVAATWMAFVVEGITRGADHVAYHI
ENVGSILAVHMVAGGLAVLLSPLQVSRMWRRGDRRKHVYLGWVMVPIVTIGALTTPPISFNMNYPLWSELGFAMGSIAWF
GALVMGIWAIKTKQYVRHQRWMVMMVALSFGAVSFRLQLPILRLFWDMHVVFPYLGWTCWVPNVLVVAWWWHRQARKPVP
AVQPAE
>Mature_245_residues
SESSDPKHRPRLPRRQIPRWGWIAFLLFSALSAASAFKFVFPGLIYGVFAHWGEGVAATWMAFVVEGITRGADHVAYHIE
NVGSILAVHMVAGGLAVLLSPLQVSRMWRRGDRRKHVYLGWVMVPIVTIGALTTPPISFNMNYPLWSELGFAMGSIAWFG
ALVMGIWAIKTKQYVRHQRWMVMMVALSFGAVSFRLQLPILRLFWDMHVVFPYLGWTCWVPNVLVVAWWWHRQARKPVPA
VQPAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28040; Mature: 27908

Theoretical pI: Translated: 11.26; Mature: 11.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCC
>Mature Secondary Structure 
SESSDPKHRPRLPRRQIPRWGWIAFLLFSALSAASAFKFVFPGLIYGVFAHWGEGVAAT
CCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
WMAFVVEGITRGADHVAYHIENVGSILAVHMVAGGLAVLLSPLQVSRMWRRGDRRKHVYL
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
GWVMVPIVTIGALTTPPISFNMNYPLWSELGFAMGSIAWFGALVMGIWAIKTKQYVRHQR
HHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WMVMMVALSFGAVSFRLQLPILRLFWDMHVVFPYLGWTCWVPNVLVVAWWWHRQARKPVP
HHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
AVQPAE
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA