| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is ywbO [H]
Identifier: 89054807
GI number: 89054807
Start: 2320654
End: 2321319
Strand: Direct
Name: ywbO [H]
Synonym: Jann_2316
Alternate gene names: 89054807
Gene position: 2320654-2321319 (Clockwise)
Preceding gene: 89054806
Following gene: 89054808
Centisome position: 53.74
GC content: 65.02
Gene sequence:
>666_bases ATGATCAAACTCGACATCCTCTCGGACCCTATTTGCCCCTGGTGCTATATCGGCTGGTCGAATCTGGCCCGTGCGATGGA GGCGAGGCCGAACCACCCCTTCACCATCGAATGGCATCCCTTCCAGCTGAACCCCGACATGCCCGAGGATGGCATGGATC GCCGCGCGTATCTGGAGGGCAAATTCGGCGGCAAGGACGCGGCCGTGCGCGCCTATGCGCCCGTGGCCGAAAAGGCCGCA GAGGCGGGGCTGACGCTGAACCTTGAGGGCATCAAACGCACGCCCAACACCCGCGATGCCCATCGTCTGATCCACTGGGC GGGGATCGAGGGACGGCAGACGCCGCTGGTGCTGGCGCTGTTCCGGGCCTATTTCGTCGAGGGGCGCGATATCGGCGACC GCGACACGCTTCTGGAGATCGCCGAAAGCGTCGGACTGGACCGCGCCATGATCGCCAAGCTCTACGACAGCGGCGCCGAT GCCGAGGATATCAAAGCCCGCGACGCCCATGCCCGCGAACGCGGTGTGCAGGCCGTGCCCACGTTCATCGTGGCCAACCA GCACGCCGTGCCGGGCGCGCAACCGCCTGAGCAATGGATGGCCATCATCGACGACCTGACGACACAGCTGGAAAAGCTGC AACAGGACGAAGAGGCGCAGGGGTGA
Upstream 100 bases:
>100_bases AACATCCCCGCGCCTATCTGCATCTGCCAGATGGCCTGCCCCGGGGCGCGAATGGAAAATTGAACCGCCGCGCGCTGGCG CAGGCGGTGAAGGACATGAC
Downstream 100 bases:
>100_bases TCACCGCTCACCTCCCGTCCGGCTACGTGCTGGGGGCCTCCCTCGGCCTGACCGGCACCGCATTTGCCGCCGCCCTGATT GGCGCGGTGTTCCCGGACCT
Product: DSBA oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 221; Mature: 221
Protein sequence:
>221_residues MIKLDILSDPICPWCYIGWSNLARAMEARPNHPFTIEWHPFQLNPDMPEDGMDRRAYLEGKFGGKDAAVRAYAPVAEKAA EAGLTLNLEGIKRTPNTRDAHRLIHWAGIEGRQTPLVLALFRAYFVEGRDIGDRDTLLEIAESVGLDRAMIAKLYDSGAD AEDIKARDAHARERGVQAVPTFIVANQHAVPGAQPPEQWMAIIDDLTTQLEKLQQDEEAQG
Sequences:
>Translated_221_residues MIKLDILSDPICPWCYIGWSNLARAMEARPNHPFTIEWHPFQLNPDMPEDGMDRRAYLEGKFGGKDAAVRAYAPVAEKAA EAGLTLNLEGIKRTPNTRDAHRLIHWAGIEGRQTPLVLALFRAYFVEGRDIGDRDTLLEIAESVGLDRAMIAKLYDSGAD AEDIKARDAHARERGVQAVPTFIVANQHAVPGAQPPEQWMAIIDDLTTQLEKLQQDEEAQG >Mature_221_residues MIKLDILSDPICPWCYIGWSNLARAMEARPNHPFTIEWHPFQLNPDMPEDGMDRRAYLEGKFGGKDAAVRAYAPVAEKAA EAGLTLNLEGIKRTPNTRDAHRLIHWAGIEGRQTPLVLALFRAYFVEGRDIGDRDTLLEIAESVGLDRAMIAKLYDSGAD AEDIKARDAHARERGVQAVPTFIVANQHAVPGAQPPEQWMAIIDDLTTQLEKLQQDEEAQG
Specific function: Unknown
COG id: COG2761
COG function: function code Q; Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001853 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF01323 DSBA [H]
EC number: NA
Molecular weight: Translated: 24624; Mature: 24624
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKLDILSDPICPWCYIGWSNLARAMEARPNHPFTIEWHPFQLNPDMPEDGMDRRAYLEG CEEECCCCCCCCCCEECCHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCCCCEEEECC KFGGKDAAVRAYAPVAEKAAEAGLTLNLEGIKRTPNTRDAHRLIHWAGIEGRQTPLVLAL CCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHEECCCCCCCHHHHHH FRAYFVEGRDIGDRDTLLEIAESVGLDRAMIAKLYDSGADAEDIKARDAHARERGVQAVP HHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHCC TFIVANQHAVPGAQPPEQWMAIIDDLTTQLEKLQQDEEAQG CEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MIKLDILSDPICPWCYIGWSNLARAMEARPNHPFTIEWHPFQLNPDMPEDGMDRRAYLEG CEEECCCCCCCCCCEECCHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCCCCEEEECC KFGGKDAAVRAYAPVAEKAAEAGLTLNLEGIKRTPNTRDAHRLIHWAGIEGRQTPLVLAL CCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHEECCCCCCCHHHHHH FRAYFVEGRDIGDRDTLLEIAESVGLDRAMIAKLYDSGADAEDIKARDAHARERGVQAVP HHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHCC TFIVANQHAVPGAQPPEQWMAIIDDLTTQLEKLQQDEEAQG CEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7934828; 9384377 [H]