| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054786
Identifier: 89054786
GI number: 89054786
Start: 2301454
End: 2302377
Strand: Reverse
Name: 89054786
Synonym: Jann_2295
Alternate gene names: NA
Gene position: 2302377-2301454 (Counterclockwise)
Preceding gene: 89054787
Following gene: 89054778
Centisome position: 53.32
GC content: 61.47
Gene sequence:
>924_bases ATGACCTCTGACGATCTCCTGCCCTATGGGTACATCGACGCGCACCATCACGTTTGGGCCCCGGACAGCCATGGTGATGC GATTGGTTATGGCTGGTTGCGCGATATCGGCGCGATGAAACCGTTTGGGGATCCGACCCCGATCCAGCGCGACTACCTGA TGGCGGAGTTTCTGTCAGAGGCCCCGGACGCGCCGCGCGCGAGTGTGCATGTGCAGACCGACGGGACGCTGCCGGACCCT GTGGCGGAGACGCGGTTCGTGCAGGCGCAGGCAGATGCCACCGATCATCCGGTGAAGATCGTCGGTCTGGCGGATCTCGG CGCAGAGGATCTGACCGGAACCCTGGACCGCCACGCCGAGAGCCGTGATTTCTGCGGCGTGCGGCAGATCGCGGCGCGGC TGGATCACAGGCCGGATCTGACCTTTGCGCCGCAGGACTATCTGGCCGATGAACAATGGGTTAACGGACTGAAAATCCTC GAAGATCGGGGGCTGACTTTTGACTTGCAGATTTACCCCGAACAGGCGGAGGCCGCGCTGGAGGCCCTGTCCGCGACCCC TGCCCTGACCGTCATCATCGACCATGCGCTGTGTCCCTATGATCCCGCAAAGATCACGCAATGGCAGGCCGCCGTGGCGC TTATGGCGGCGCGCGACAACACATTTATCAAGCTCAGCGGTTGGGGCATGTATGACGCGGAATGGGACCTGAACGGAGGG GTGTCCGTGCAGCCGCTGGTGTCCCATATTCTGGAAAGGTTCGGCGCGGATCGCGTCATGTGGGGCAGCAACTTCCCGGT GGAAAAGCTCGCGACGCGGTATGAGACCTGCCGCGATGTCCATCTGGACATGGTGCCTGAGGACGCGCATCAGGATGTGT TTTTCAATTCTGCAGCAAAGACTTACGGACTGACGTTAACCTAA
Upstream 100 bases:
>100_bases GATCACACGGATATCCTTTGTGGTACCGGGCTGAGCCTTCATTCCCAGCCATACCCTTACTTAACATAATCATGATTACT GGCCAAATGGATTGCGCGAT
Downstream 100 bases:
>100_bases AGCGTAGCCAGCCCCGCGCACGGTGCGGATGGGATCACCGGCCTCCCCAACCTTCAGGGCCTTGCGCAGGCGACCCACAT GGACATCGACCGTGCGGCTA
Product: amidohydrolase 2
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 307; Mature: 306
Protein sequence:
>307_residues MTSDDLLPYGYIDAHHHVWAPDSHGDAIGYGWLRDIGAMKPFGDPTPIQRDYLMAEFLSEAPDAPRASVHVQTDGTLPDP VAETRFVQAQADATDHPVKIVGLADLGAEDLTGTLDRHAESRDFCGVRQIAARLDHRPDLTFAPQDYLADEQWVNGLKIL EDRGLTFDLQIYPEQAEAALEALSATPALTVIIDHALCPYDPAKITQWQAAVALMAARDNTFIKLSGWGMYDAEWDLNGG VSVQPLVSHILERFGADRVMWGSNFPVEKLATRYETCRDVHLDMVPEDAHQDVFFNSAAKTYGLTLT
Sequences:
>Translated_307_residues MTSDDLLPYGYIDAHHHVWAPDSHGDAIGYGWLRDIGAMKPFGDPTPIQRDYLMAEFLSEAPDAPRASVHVQTDGTLPDP VAETRFVQAQADATDHPVKIVGLADLGAEDLTGTLDRHAESRDFCGVRQIAARLDHRPDLTFAPQDYLADEQWVNGLKIL EDRGLTFDLQIYPEQAEAALEALSATPALTVIIDHALCPYDPAKITQWQAAVALMAARDNTFIKLSGWGMYDAEWDLNGG VSVQPLVSHILERFGADRVMWGSNFPVEKLATRYETCRDVHLDMVPEDAHQDVFFNSAAKTYGLTLT >Mature_306_residues TSDDLLPYGYIDAHHHVWAPDSHGDAIGYGWLRDIGAMKPFGDPTPIQRDYLMAEFLSEAPDAPRASVHVQTDGTLPDPV AETRFVQAQADATDHPVKIVGLADLGAEDLTGTLDRHAESRDFCGVRQIAARLDHRPDLTFAPQDYLADEQWVNGLKILE DRGLTFDLQIYPEQAEAALEALSATPALTVIIDHALCPYDPAKITQWQAAVALMAARDNTFIKLSGWGMYDAEWDLNGGV SVQPLVSHILERFGADRVMWGSNFPVEKLATRYETCRDVHLDMVPEDAHQDVFFNSAAKTYGLTLT
Specific function: Unknown
COG id: COG3618
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006992 [H]
Pfam domain/function: PF04909 Amidohydro_2 [H]
EC number: NA
Molecular weight: Translated: 33972; Mature: 33841
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSDDLLPYGYIDAHHHVWAPDSHGDAIGYGWLRDIGAMKPFGDPTPIQRDYLMAEFLSE CCCCCCCCCCEEECCCEEECCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH APDAPRASVHVQTDGTLPDPVAETRFVQAQADATDHPVKIVGLADLGAEDLTGTLDRHAE CCCCCCCEEEEEECCCCCCCHHHHEEEEEECCCCCCCEEEEEECCCCCHHHHHHHHHCCC SRDFCGVRQIAARLDHRPDLTFAPQDYLADEQWVNGLKILEDRGLTFDLQIYPEQAEAAL CCCCHHHHHHHHHHCCCCCCCCCCHHHCCCHHHHCCHHEEECCCCEEEEEECCCHHHHHH EALSATPALTVIIDHALCPYDPAKITQWQAAVALMAARDNTFIKLSGWGMYDAEWDLNGG HHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHEECCCCEEEEECCEEECCCCCCCCC VSVQPLVSHILERFGADRVMWGSNFPVEKLATRYETCRDVHLDMVPEDAHQDVFFNSAAK CCHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCHH TYGLTLT CCCCEEC >Mature Secondary Structure TSDDLLPYGYIDAHHHVWAPDSHGDAIGYGWLRDIGAMKPFGDPTPIQRDYLMAEFLSE CCCCCCCCCEEECCCEEECCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH APDAPRASVHVQTDGTLPDPVAETRFVQAQADATDHPVKIVGLADLGAEDLTGTLDRHAE CCCCCCCEEEEEECCCCCCCHHHHEEEEEECCCCCCCEEEEEECCCCCHHHHHHHHHCCC SRDFCGVRQIAARLDHRPDLTFAPQDYLADEQWVNGLKILEDRGLTFDLQIYPEQAEAAL CCCCHHHHHHHHHHCCCCCCCCCCHHHCCCHHHHCCHHEEECCCCEEEEEECCCHHHHHH EALSATPALTVIIDHALCPYDPAKITQWQAAVALMAARDNTFIKLSGWGMYDAEWDLNGG HHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHEECCCCEEEEECCEEECCCCCCCCC VSVQPLVSHILERFGADRVMWGSNFPVEKLATRYETCRDVHLDMVPEDAHQDVFFNSAAK CCHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCHH TYGLTLT CCCCEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]