Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89054787

Identifier: 89054787

GI number: 89054787

Start: 2302444

End: 2302851

Strand: Reverse

Name: 89054787

Synonym: Jann_2296

Alternate gene names: NA

Gene position: 2302851-2302444 (Counterclockwise)

Preceding gene: 89054788

Following gene: 89054786

Centisome position: 53.33

GC content: 59.07

Gene sequence:

>408_bases
ATGACGCGCACTTGGATCACAGCTGCACCGAGCGCGCTTTCACTTGTCGTGCCGATGCTGGCCCATGCACAAGAACAGCT
GTTGGCGCAATACGTCGCCGACATCCGCGCGGAGGATCGACATAACTCAACTGGCGTCCGGCTCACGAGTTTCGCCGCGC
TGCTGGCACAGGACCGCGCCAATTACCATCGGTTCGGGATCAGGCATTCCAATGACGGCGCTGATCCGATCTTTGGGGAT
CGCGCGATGCGGGCGCAGATCACCGATGCAGTGGTGGAGGTCAGTCCAGGCTATGCAGGATATGTGCAGAGCATTCTGGG
AGGCGACATCGCAAGCACATATTTGGTGGTCTACGTTCACGGGACCGGAACCCAGATCACACGGATATCCTTTGTGGTAC
CGGGCTGA

Upstream 100 bases:

>100_bases
CCTGGGTGCCCCAGGGCCATGCACCGGCGCGCGCCTGCGGTGAAGCCAAACTGGCCCGAGATGTTCTGAAAGTGGAAATG
ATCGTCACGGCGGCCGTGGC

Downstream 100 bases:

>100_bases
GCCTTCATTCCCAGCCATACCCTTACTTAACATAATCATGATTACTGGCCAAATGGATTGCGCGATATGACCTCTGACGA
TCTCCTGCCCTATGGGTACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 134

Protein sequence:

>135_residues
MTRTWITAAPSALSLVVPMLAHAQEQLLAQYVADIRAEDRHNSTGVRLTSFAALLAQDRANYHRFGIRHSNDGADPIFGD
RAMRAQITDAVVEVSPGYAGYVQSILGGDIASTYLVVYVHGTGTQITRISFVVPG

Sequences:

>Translated_135_residues
MTRTWITAAPSALSLVVPMLAHAQEQLLAQYVADIRAEDRHNSTGVRLTSFAALLAQDRANYHRFGIRHSNDGADPIFGD
RAMRAQITDAVVEVSPGYAGYVQSILGGDIASTYLVVYVHGTGTQITRISFVVPG
>Mature_134_residues
TRTWITAAPSALSLVVPMLAHAQEQLLAQYVADIRAEDRHNSTGVRLTSFAALLAQDRANYHRFGIRHSNDGADPIFGDR
AMRAQITDAVVEVSPGYAGYVQSILGGDIASTYLVVYVHGTGTQITRISFVVPG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14587; Mature: 14455

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRTWITAAPSALSLVVPMLAHAQEQLLAQYVADIRAEDRHNSTGVRLTSFAALLAQDRA
CCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCC
NYHRFGIRHSNDGADPIFGDRAMRAQITDAVVEVSPGYAGYVQSILGGDIASTYLVVYVH
CHHHCCCEECCCCCCCCCCCHHHHHHHHHHHEEECCCHHHHHHHHHCCCCCCEEEEEEEE
GTGTQITRISFVVPG
CCCCEEEEEEEEECC
>Mature Secondary Structure 
TRTWITAAPSALSLVVPMLAHAQEQLLAQYVADIRAEDRHNSTGVRLTSFAALLAQDRA
CCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCC
NYHRFGIRHSNDGADPIFGDRAMRAQITDAVVEVSPGYAGYVQSILGGDIASTYLVVYVH
CHHHCCCEECCCCCCCCCCCHHHHHHHHHHHEEECCCHHHHHHHHHCCCCCCEEEEEEEE
GTGTQITRISFVVPG
CCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA