| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is yqgH [H]
Identifier: 89054781
GI number: 89054781
Start: 2296383
End: 2297834
Strand: Direct
Name: yqgH [H]
Synonym: Jann_2290
Alternate gene names: 89054781
Gene position: 2296383-2297834 (Clockwise)
Preceding gene: 89054780
Following gene: 89054782
Centisome position: 53.18
GC content: 63.43
Gene sequence:
>1452_bases ATGCTCTGGATTCTCCTTGTCCTCGCGGTTCTCGGCCTTCTGGGATACGTCTTGGGCCGCAGCCGTGCGATCTCCAGCGC TGGGGGGGATGCACGCATTCTGCATTCGCTGCCGACATACTATGGCACCAACGTCACGCTGCTGACCGTCATGCCCGCCC TTCTGGTTCTGGGGGTCTGGCTGATCATCCAGCCGATTGTGATCGACCAATATGTTCAGACGCAGATCCCGGAGCCCTTT GTCTATAGCGTGGGGTCTTTCGACCTGCTGATGACCGAGGTCAGCCGCCTTGCCGACGGCATCGACACCGCAGTGGAGCG TGGCGCGCTGACCGAGGCTGAGGCCGCCGCCCTCGACCCCGCCACGGATGTTCGCGCACAACTGGCAGAGGCGGGCGTGG CCCTGGGGGCCGATGTCCAACCCGAGGTCCTGGTTGCCGCGCAACAGCTGCGCGCGGTCTCCTCTGCCGCATGGGTCTGG ATGCTGATGGTTGTGGGCACATTGGCGGTTGCGGGGCTCGCCTACGCAGCGATGCGCACCCACAAGGACCAGCGTGCGCG CAATTCGGTGGAACGGGCCGTTCTCGGCCTGCTGATGGCCGCCTCGACCATCGCGATCCTGACGACCGTGGGCATCGTCC TGTCAATGCTGTGGGACACGCGCAATTTCTTTCAACTCTACCCCTGGCAGGACTTCTTCTTCGGCCTTGAATGGCGGCCT TCGTTTGAAGGCGGGTCCGAACTTGGCCTGATCCCGCTTCTGTGGGGTACGATGTATATCTCGTTCATCGCGCTTCTGGT GGCGGTGCCCATCGGCCTATTCGCGGCGATCTACATGGCGGAATATGCAACGATCCGCGTCCGCTCGATCGCCAAGCCGC TGATCGAGGTGCTGGCGGGCATTCCCACCATCGTCTACGGTCTCTTCGCCCTGATCACGGTCGGCCCGATGCTGCGGGAC TACTTCGCGCAGCCCCTGGGTCTGGGCGACTCCTCCTCCAGCGTGATGACCGCAGGCATCGTCATGGGCATCATGTTGAT CCCCTTCGTGTCCTCGCTGTCGGACGACATCATCAACGCGGTGCCGCAATCGCTGCGCGACGGCTCTTACGGGTTAGGGG CCACGCAGTCGGAAACGGTGAAGCAGGTGATTCTGCCTGCCGCGTTGCCGGGCATTGTGGGCGCCGTGCTTCTGGCCGCC TCCCGCGCGATTGGCGAGACGATGATCGTGGTTCTGGGGGCAGGGGCCGCGGCCCGGCTGGACCTGAACCCGTTTGAGGC GATGACGACGGTTACTGTGAAGATCGTCGGCCAACTGACTGGGGACACTGACTTTTCTTCACCCGAGGCGCTGGTCGCCT TCGCCCTTGGCCTGACCCTCTTCGTGATCACCCTGGGCCTCAACATCGTGGCGCTCGCCGTCGTGCGCAAATATCGGGAG CAGTACGATTGA
Upstream 100 bases:
>100_bases GTCGCCAACGGCACCTTGATGGGCAACTAGGCCCTTACCTTTCGGGTGGGGCCGCGATACGGCCCTGCCCAAACCTCTCT GACGCGAAAGCTATCCCTTC
Downstream 100 bases:
>100_bases CCGATACATCACCTGATCATTCGCCACCTCGCGACGGGCGGCTCAACCGCTCGCTCTTTGCCAGCGATGCCCGCACCGCA AAACGCAATCGGGCGGAGCG
Product: phosphate ABC transporter permease
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 483; Mature: 483
Protein sequence:
>483_residues MLWILLVLAVLGLLGYVLGRSRAISSAGGDARILHSLPTYYGTNVTLLTVMPALLVLGVWLIIQPIVIDQYVQTQIPEPF VYSVGSFDLLMTEVSRLADGIDTAVERGALTEAEAAALDPATDVRAQLAEAGVALGADVQPEVLVAAQQLRAVSSAAWVW MLMVVGTLAVAGLAYAAMRTHKDQRARNSVERAVLGLLMAASTIAILTTVGIVLSMLWDTRNFFQLYPWQDFFFGLEWRP SFEGGSELGLIPLLWGTMYISFIALLVAVPIGLFAAIYMAEYATIRVRSIAKPLIEVLAGIPTIVYGLFALITVGPMLRD YFAQPLGLGDSSSSVMTAGIVMGIMLIPFVSSLSDDIINAVPQSLRDGSYGLGATQSETVKQVILPAALPGIVGAVLLAA SRAIGETMIVVLGAGAAARLDLNPFEAMTTVTVKIVGQLTGDTDFSSPEALVAFALGLTLFVITLGLNIVALAVVRKYRE QYD
Sequences:
>Translated_483_residues MLWILLVLAVLGLLGYVLGRSRAISSAGGDARILHSLPTYYGTNVTLLTVMPALLVLGVWLIIQPIVIDQYVQTQIPEPF VYSVGSFDLLMTEVSRLADGIDTAVERGALTEAEAAALDPATDVRAQLAEAGVALGADVQPEVLVAAQQLRAVSSAAWVW MLMVVGTLAVAGLAYAAMRTHKDQRARNSVERAVLGLLMAASTIAILTTVGIVLSMLWDTRNFFQLYPWQDFFFGLEWRP SFEGGSELGLIPLLWGTMYISFIALLVAVPIGLFAAIYMAEYATIRVRSIAKPLIEVLAGIPTIVYGLFALITVGPMLRD YFAQPLGLGDSSSSVMTAGIVMGIMLIPFVSSLSDDIINAVPQSLRDGSYGLGATQSETVKQVILPAALPGIVGAVLLAA SRAIGETMIVVLGAGAAARLDLNPFEAMTTVTVKIVGQLTGDTDFSSPEALVAFALGLTLFVITLGLNIVALAVVRKYRE QYD >Mature_483_residues MLWILLVLAVLGLLGYVLGRSRAISSAGGDARILHSLPTYYGTNVTLLTVMPALLVLGVWLIIQPIVIDQYVQTQIPEPF VYSVGSFDLLMTEVSRLADGIDTAVERGALTEAEAAALDPATDVRAQLAEAGVALGADVQPEVLVAAQQLRAVSSAAWVW MLMVVGTLAVAGLAYAAMRTHKDQRARNSVERAVLGLLMAASTIAILTTVGIVLSMLWDTRNFFQLYPWQDFFFGLEWRP SFEGGSELGLIPLLWGTMYISFIALLVAVPIGLFAAIYMAEYATIRVRSIAKPLIEVLAGIPTIVYGLFALITVGPMLRD YFAQPLGLGDSSSSVMTAGIVMGIMLIPFVSSLSDDIINAVPQSLRDGSYGLGATQSETVKQVILPAALPGIVGAVLLAA SRAIGETMIVVLGAGAAARLDLNPFEAMTTVTVKIVGQLTGDTDFSSPEALVAFALGLTLFVITLGLNIVALAVVRKYRE QYD
Specific function: Part of the binding-protein-dependent transport system yqgGHIJK. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0573
COG function: function code P; ABC-type phosphate transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790164, Length=260, Percent_Identity=30, Blast_Score=114, Evalue=2e-26, Organism=Escherichia coli, GI1790163, Length=247, Percent_Identity=27.1255060728745, Blast_Score=67, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011864 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 51409; Mature: 51409
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLWILLVLAVLGLLGYVLGRSRAISSAGGDARILHSLPTYYGTNVTLLTVMPALLVLGVW CHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH LIIQPIVIDQYVQTQIPEPFVYSVGSFDLLMTEVSRLADGIDTAVERGALTEAEAAALDP HHHHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCC ATDVRAQLAEAGVALGADVQPEVLVAAQQLRAVSSAAWVWMLMVVGTLAVAGLAYAAMRT HHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HKDQRARNSVERAVLGLLMAASTIAILTTVGIVLSMLWDTRNFFQLYPWQDFFFGLEWRP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEECCCHHHHCCCCCCC SFEGGSELGLIPLLWGTMYISFIALLVAVPIGLFAAIYMAEYATIRVRSIAKPLIEVLAG CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IPTIVYGLFALITVGPMLRDYFAQPLGLGDSSSSVMTAGIVMGIMLIPFVSSLSDDIINA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VPQSLRDGSYGLGATQSETVKQVILPAALPGIVGAVLLAASRAIGETMIVVLGAGAAARL HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCEEEE DLNPFEAMTTVTVKIVGQLTGDTDFSSPEALVAFALGLTLFVITLGLNIVALAVVRKYRE CCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QYD HCC >Mature Secondary Structure MLWILLVLAVLGLLGYVLGRSRAISSAGGDARILHSLPTYYGTNVTLLTVMPALLVLGVW CHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH LIIQPIVIDQYVQTQIPEPFVYSVGSFDLLMTEVSRLADGIDTAVERGALTEAEAAALDP HHHHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCC ATDVRAQLAEAGVALGADVQPEVLVAAQQLRAVSSAAWVWMLMVVGTLAVAGLAYAAMRT HHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HKDQRARNSVERAVLGLLMAASTIAILTTVGIVLSMLWDTRNFFQLYPWQDFFFGLEWRP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEECCCHHHHCCCCCCC SFEGGSELGLIPLLWGTMYISFIALLVAVPIGLFAAIYMAEYATIRVRSIAKPLIEVLAG CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IPTIVYGLFALITVGPMLRDYFAQPLGLGDSSSSVMTAGIVMGIMLIPFVSSLSDDIINA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VPQSLRDGSYGLGATQSETVKQVILPAALPGIVGAVLLAASRAIGETMIVVLGAGAAARL HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCEEEE DLNPFEAMTTVTVKIVGQLTGDTDFSSPEALVAFALGLTLFVITLGLNIVALAVVRKYRE CCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QYD HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8760913; 8969508; 9384377 [H]