Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

Click here to switch to the map view.

The map label for this gene is sphX [H]

Identifier: 89054780

GI number: 89054780

Start: 2295278

End: 2296312

Strand: Direct

Name: sphX [H]

Synonym: Jann_2289

Alternate gene names: 89054780

Gene position: 2295278-2296312 (Clockwise)

Preceding gene: 89054779

Following gene: 89054781

Centisome position: 53.16

GC content: 63.86

Gene sequence:

>1035_bases
ATGTCGTTCGCAAAATTGAGCGTTTCCGTCCTTGCCGTCACGGCCATCACGACGGCGGCCTCGGCCCAGAGCCGGGACAA
CGTGCAGATCGCCGGGTCCTCGACCGTGCTGCCCTATGCGACCATCGTCGCCGAGGCGTTTGGCGAGAACTTTGACTTCC
CCACACCGGTCGTTGAATCGGGCGGCTCCTCCACCGGTCTGCGCCGCTTCTGCGAGGGCGTGGGCGAGAACACCACCGAC
ATCGCCAATTCCTCCCGCTCGATCCGCGAGAGCGAAATCGCCACCTGCGCTGAAAACGGCGTGACCGACATCATCGAAGT
GCGCTTCGGGTATGACGGCATCGTCTTCGCCTCGGACATCAACGGTCCGTCGTTTGAATTCACCCAGTCCGACTGGCACC
TGGCGCTCGCCGCCGAATTGCCGGTGGATGGCGAGATGGTCGCCAACCCCAACACCAACTGGAGCCAGGTGCGCGATGGC
CTGCCGGATCAGCCGATCTCTGCCTTCGTTCCCGGCACCCGCCACGGCACCCGCGAAGTCTTCGACGAGCGTGTGATCCT
TCAGGGTTGCGAAGACAACGGCTCCATGGCCGCGATAATGGACATGGGCATGGATGAGGATGCGGCTGAGGAAGCCTGCA
TGGAATTGCGCGCCGATGGCGTGTCTGTCGACATCGACGGCGACTATACCGAGACGCTGGCCCGCATCAACGCCGACGCC
AACGGTATCGGCGTCTTTGGCCTCGCGTTCTACGAGAACAACACCAGCGTTCTGCAAGTCGCCACGATGGCCGGCGTCGT
CCCCACCGTGGACGCGATTGCGACGGGCGAATACCCGGTGTCCCGCCCGCTGTATTTCTACATCAAGGCGGCGCATCTGG
GCGTGATCCCCGGCCTGCAGGAATACGCGGACTTCTTCGTCAGCGATGACATCGCCGGGGATTGGGGCCCGCTGGCCGCC
TACGGCCTGGTCTCCGACCCGGAACTGGCCGAGACCCAGGCCATTGTCGCCAACGGCACCTTGATGGGCAACTAG

Upstream 100 bases:

>100_bases
AAGCGTCACAAAAGCTTGGCCAACGGTGCGTAGTCCAAGCCTCAAGCGCGAGGCAGACGCCCTGCGTGATGTCTGAAAAC
AACCTTGGAGCACCTCCAAC

Downstream 100 bases:

>100_bases
GCCCTTACCTTTCGGGTGGGGCCGCGATACGGCCCTGCCCAAACCTCTCTGACGCGAAAGCTATCCCTTCATGCTCTGGA
TTCTCCTTGTCCTCGCGGTT

Product: phosphate ABC transporter periplasmic phosphate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 344; Mature: 343

Protein sequence:

>344_residues
MSFAKLSVSVLAVTAITTAASAQSRDNVQIAGSSTVLPYATIVAEAFGENFDFPTPVVESGGSSTGLRRFCEGVGENTTD
IANSSRSIRESEIATCAENGVTDIIEVRFGYDGIVFASDINGPSFEFTQSDWHLALAAELPVDGEMVANPNTNWSQVRDG
LPDQPISAFVPGTRHGTREVFDERVILQGCEDNGSMAAIMDMGMDEDAAEEACMELRADGVSVDIDGDYTETLARINADA
NGIGVFGLAFYENNTSVLQVATMAGVVPTVDAIATGEYPVSRPLYFYIKAAHLGVIPGLQEYADFFVSDDIAGDWGPLAA
YGLVSDPELAETQAIVANGTLMGN

Sequences:

>Translated_344_residues
MSFAKLSVSVLAVTAITTAASAQSRDNVQIAGSSTVLPYATIVAEAFGENFDFPTPVVESGGSSTGLRRFCEGVGENTTD
IANSSRSIRESEIATCAENGVTDIIEVRFGYDGIVFASDINGPSFEFTQSDWHLALAAELPVDGEMVANPNTNWSQVRDG
LPDQPISAFVPGTRHGTREVFDERVILQGCEDNGSMAAIMDMGMDEDAAEEACMELRADGVSVDIDGDYTETLARINADA
NGIGVFGLAFYENNTSVLQVATMAGVVPTVDAIATGEYPVSRPLYFYIKAAHLGVIPGLQEYADFFVSDDIAGDWGPLAA
YGLVSDPELAETQAIVANGTLMGN
>Mature_343_residues
SFAKLSVSVLAVTAITTAASAQSRDNVQIAGSSTVLPYATIVAEAFGENFDFPTPVVESGGSSTGLRRFCEGVGENTTDI
ANSSRSIRESEIATCAENGVTDIIEVRFGYDGIVFASDINGPSFEFTQSDWHLALAAELPVDGEMVANPNTNWSQVRDGL
PDQPISAFVPGTRHGTREVFDERVILQGCEDNGSMAAIMDMGMDEDAAEEACMELRADGVSVDIDGDYTETLARINADAN
GIGVFGLAFYENNTSVLQVATMAGVVPTVDAIATGEYPVSRPLYFYIKAAHLGVIPGLQEYADFFVSDDIAGDWGPLAAY
GLVSDPELAETQAIVANGTLMGN

Specific function: May be involved in the system for phosphate transport across the cytoplasmic membrane [H]

COG id: COG0226

COG function: function code P; ABC-type phosphate transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pstS family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011862 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36374; Mature: 36242

Theoretical pI: Translated: 3.75; Mature: 3.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFAKLSVSVLAVTAITTAASAQSRDNVQIAGSSTVLPYATIVAEAFGENFDFPTPVVES
CCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCHHHHC
GGSSTGLRRFCEGVGENTTDIANSSRSIRESEIATCAENGVTDIIEVRFGYDGIVFASDI
CCCCHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEECC
NGPSFEFTQSDWHLALAAELPVDGEMVANPNTNWSQVRDGLPDQPISAFVPGTRHGTREV
CCCCEEEECCCCEEEEEEECCCCCCEEECCCCCHHHHHCCCCCCCHHHCCCCCCCCHHHH
FDERVILQGCEDNGSMAAIMDMGMDEDAAEEACMELRADGVSVDIDGDYTETLARINADA
HHHHHEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHCCCC
NGIGVFGLAFYENNTSVLQVATMAGVVPTVDAIATGEYPVSRPLYFYIKAAHLGVIPGLQ
CCEEEEEEEEEECCCCEEEEEHHHCCHHCHHHHCCCCCCCCCCEEEEEEEHHHCCCCCHH
EYADFFVSDDIAGDWGPLAAYGLVSDPELAETQAIVANGTLMGN
HHHHHHHCCCCCCCCCCHHEECCCCCCCHHHCEEEEECCEEECC
>Mature Secondary Structure 
SFAKLSVSVLAVTAITTAASAQSRDNVQIAGSSTVLPYATIVAEAFGENFDFPTPVVES
CCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCHHHHC
GGSSTGLRRFCEGVGENTTDIANSSRSIRESEIATCAENGVTDIIEVRFGYDGIVFASDI
CCCCHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEECC
NGPSFEFTQSDWHLALAAELPVDGEMVANPNTNWSQVRDGLPDQPISAFVPGTRHGTREV
CCCCEEEECCCCEEEEEEECCCCCCEEECCCCCHHHHHCCCCCCCHHHCCCCCCCCHHHH
FDERVILQGCEDNGSMAAIMDMGMDEDAAEEACMELRADGVSVDIDGDYTETLARINADA
HHHHHEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHCCCC
NGIGVFGLAFYENNTSVLQVATMAGVVPTVDAIATGEYPVSRPLYFYIKAAHLGVIPGLQ
CCEEEEEEEEEECCCCEEEEEHHHCCHHCHHHHCCCCCCCCCCEEEEEEEHHHCCCCCHH
EYADFFVSDDIAGDWGPLAAYGLVSDPELAETQAIVANGTLMGN
HHHHHHHCCCCCCCCCCHHEECCCCCCCHHHCEEEEECCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]