| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is sphX [H]
Identifier: 89054780
GI number: 89054780
Start: 2295278
End: 2296312
Strand: Direct
Name: sphX [H]
Synonym: Jann_2289
Alternate gene names: 89054780
Gene position: 2295278-2296312 (Clockwise)
Preceding gene: 89054779
Following gene: 89054781
Centisome position: 53.16
GC content: 63.86
Gene sequence:
>1035_bases ATGTCGTTCGCAAAATTGAGCGTTTCCGTCCTTGCCGTCACGGCCATCACGACGGCGGCCTCGGCCCAGAGCCGGGACAA CGTGCAGATCGCCGGGTCCTCGACCGTGCTGCCCTATGCGACCATCGTCGCCGAGGCGTTTGGCGAGAACTTTGACTTCC CCACACCGGTCGTTGAATCGGGCGGCTCCTCCACCGGTCTGCGCCGCTTCTGCGAGGGCGTGGGCGAGAACACCACCGAC ATCGCCAATTCCTCCCGCTCGATCCGCGAGAGCGAAATCGCCACCTGCGCTGAAAACGGCGTGACCGACATCATCGAAGT GCGCTTCGGGTATGACGGCATCGTCTTCGCCTCGGACATCAACGGTCCGTCGTTTGAATTCACCCAGTCCGACTGGCACC TGGCGCTCGCCGCCGAATTGCCGGTGGATGGCGAGATGGTCGCCAACCCCAACACCAACTGGAGCCAGGTGCGCGATGGC CTGCCGGATCAGCCGATCTCTGCCTTCGTTCCCGGCACCCGCCACGGCACCCGCGAAGTCTTCGACGAGCGTGTGATCCT TCAGGGTTGCGAAGACAACGGCTCCATGGCCGCGATAATGGACATGGGCATGGATGAGGATGCGGCTGAGGAAGCCTGCA TGGAATTGCGCGCCGATGGCGTGTCTGTCGACATCGACGGCGACTATACCGAGACGCTGGCCCGCATCAACGCCGACGCC AACGGTATCGGCGTCTTTGGCCTCGCGTTCTACGAGAACAACACCAGCGTTCTGCAAGTCGCCACGATGGCCGGCGTCGT CCCCACCGTGGACGCGATTGCGACGGGCGAATACCCGGTGTCCCGCCCGCTGTATTTCTACATCAAGGCGGCGCATCTGG GCGTGATCCCCGGCCTGCAGGAATACGCGGACTTCTTCGTCAGCGATGACATCGCCGGGGATTGGGGCCCGCTGGCCGCC TACGGCCTGGTCTCCGACCCGGAACTGGCCGAGACCCAGGCCATTGTCGCCAACGGCACCTTGATGGGCAACTAG
Upstream 100 bases:
>100_bases AAGCGTCACAAAAGCTTGGCCAACGGTGCGTAGTCCAAGCCTCAAGCGCGAGGCAGACGCCCTGCGTGATGTCTGAAAAC AACCTTGGAGCACCTCCAAC
Downstream 100 bases:
>100_bases GCCCTTACCTTTCGGGTGGGGCCGCGATACGGCCCTGCCCAAACCTCTCTGACGCGAAAGCTATCCCTTCATGCTCTGGA TTCTCCTTGTCCTCGCGGTT
Product: phosphate ABC transporter periplasmic phosphate-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 344; Mature: 343
Protein sequence:
>344_residues MSFAKLSVSVLAVTAITTAASAQSRDNVQIAGSSTVLPYATIVAEAFGENFDFPTPVVESGGSSTGLRRFCEGVGENTTD IANSSRSIRESEIATCAENGVTDIIEVRFGYDGIVFASDINGPSFEFTQSDWHLALAAELPVDGEMVANPNTNWSQVRDG LPDQPISAFVPGTRHGTREVFDERVILQGCEDNGSMAAIMDMGMDEDAAEEACMELRADGVSVDIDGDYTETLARINADA NGIGVFGLAFYENNTSVLQVATMAGVVPTVDAIATGEYPVSRPLYFYIKAAHLGVIPGLQEYADFFVSDDIAGDWGPLAA YGLVSDPELAETQAIVANGTLMGN
Sequences:
>Translated_344_residues MSFAKLSVSVLAVTAITTAASAQSRDNVQIAGSSTVLPYATIVAEAFGENFDFPTPVVESGGSSTGLRRFCEGVGENTTD IANSSRSIRESEIATCAENGVTDIIEVRFGYDGIVFASDINGPSFEFTQSDWHLALAAELPVDGEMVANPNTNWSQVRDG LPDQPISAFVPGTRHGTREVFDERVILQGCEDNGSMAAIMDMGMDEDAAEEACMELRADGVSVDIDGDYTETLARINADA NGIGVFGLAFYENNTSVLQVATMAGVVPTVDAIATGEYPVSRPLYFYIKAAHLGVIPGLQEYADFFVSDDIAGDWGPLAA YGLVSDPELAETQAIVANGTLMGN >Mature_343_residues SFAKLSVSVLAVTAITTAASAQSRDNVQIAGSSTVLPYATIVAEAFGENFDFPTPVVESGGSSTGLRRFCEGVGENTTDI ANSSRSIRESEIATCAENGVTDIIEVRFGYDGIVFASDINGPSFEFTQSDWHLALAAELPVDGEMVANPNTNWSQVRDGL PDQPISAFVPGTRHGTREVFDERVILQGCEDNGSMAAIMDMGMDEDAAEEACMELRADGVSVDIDGDYTETLARINADAN GIGVFGLAFYENNTSVLQVATMAGVVPTVDAIATGEYPVSRPLYFYIKAAHLGVIPGLQEYADFFVSDDIAGDWGPLAAY GLVSDPELAETQAIVANGTLMGN
Specific function: May be involved in the system for phosphate transport across the cytoplasmic membrane [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pstS family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011862 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36374; Mature: 36242
Theoretical pI: Translated: 3.75; Mature: 3.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFAKLSVSVLAVTAITTAASAQSRDNVQIAGSSTVLPYATIVAEAFGENFDFPTPVVES CCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCHHHHC GGSSTGLRRFCEGVGENTTDIANSSRSIRESEIATCAENGVTDIIEVRFGYDGIVFASDI CCCCHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEECC NGPSFEFTQSDWHLALAAELPVDGEMVANPNTNWSQVRDGLPDQPISAFVPGTRHGTREV CCCCEEEECCCCEEEEEEECCCCCCEEECCCCCHHHHHCCCCCCCHHHCCCCCCCCHHHH FDERVILQGCEDNGSMAAIMDMGMDEDAAEEACMELRADGVSVDIDGDYTETLARINADA HHHHHEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHCCCC NGIGVFGLAFYENNTSVLQVATMAGVVPTVDAIATGEYPVSRPLYFYIKAAHLGVIPGLQ CCEEEEEEEEEECCCCEEEEEHHHCCHHCHHHHCCCCCCCCCCEEEEEEEHHHCCCCCHH EYADFFVSDDIAGDWGPLAAYGLVSDPELAETQAIVANGTLMGN HHHHHHHCCCCCCCCCCHHEECCCCCCCHHHCEEEEECCEEECC >Mature Secondary Structure SFAKLSVSVLAVTAITTAASAQSRDNVQIAGSSTVLPYATIVAEAFGENFDFPTPVVES CCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCHHHHC GGSSTGLRRFCEGVGENTTDIANSSRSIRESEIATCAENGVTDIIEVRFGYDGIVFASDI CCCCHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEECC NGPSFEFTQSDWHLALAAELPVDGEMVANPNTNWSQVRDGLPDQPISAFVPGTRHGTREV CCCCEEEECCCCEEEEEEECCCCCCEEECCCCCHHHHHCCCCCCCHHHCCCCCCCCHHHH FDERVILQGCEDNGSMAAIMDMGMDEDAAEEACMELRADGVSVDIDGDYTETLARINADA HHHHHEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHCCCC NGIGVFGLAFYENNTSVLQVATMAGVVPTVDAIATGEYPVSRPLYFYIKAAHLGVIPGLQ CCEEEEEEEEEECCCCEEEEEHHHCCHHCHHHHCCCCCCCCCCEEEEEEEHHHCCCCCHH EYADFFVSDDIAGDWGPLAAYGLVSDPELAETQAIVANGTLMGN HHHHHHHCCCCCCCCCCHHEECCCCCCCHHHCEEEEECCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]