| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054763
Identifier: 89054763
GI number: 89054763
Start: 2278410
End: 2279630
Strand: Reverse
Name: 89054763
Synonym: Jann_2272
Alternate gene names: NA
Gene position: 2279630-2278410 (Counterclockwise)
Preceding gene: 89054764
Following gene: 89054762
Centisome position: 52.79
GC content: 61.26
Gene sequence:
>1221_bases TTGGCTTGGCCGCATATTATCACGGACATGCACGACATTTCGGCAGGGCTTCGGCATCCTGATCTGAAGCAAGCGCTCTA CGACGACGGCGCGGTGATCATGGCTGATACTCTGCTGACGCTACACGGAGAGCCGCACCGCAACCGTCGCAAGCTGGAAT TTCGCGTCTTCCGAAAGGACTATTTCCATTGGTACGAGCGCACGGTTTTTCCCGATACGGTAAGGAGCAGCCTAAGCGAT GATCTCGCCGCAGGCCGTAGTGAGTTGGTGGACCTCGGCTACCGCGTCACGATGAACCTGACGGCAGATTTTGCGGGCAT TGATCGACCCGAGCAATCGGCGGAAGAGACGGGTCGGCTGTTGCGGTTGGTGGCGACCTTTTCGGAAGGGGCCACAATTG TCCATTCCAAACGCCCCAAGGACGACGTCCGGGCCGAGGTGCGCGCAGCCATCGCGGATTTTGAGCCGCACTTCCTGTCA GCCTCCGTGGCGCGAAGGAGAGCCCTTTTGGCGGATCATGCGGCGGGACGGATCGACGAAGATGCCCTGCCCCGCGATGT GTTGACGGTCATCCTGCGCGACGGTGATCCAACGGAGTTCACCCCCGAGGTGCTGACCCGCGAGATTGGGTTCTACCTTC AGGCCGGGGCGCATTCGACCGCGAATTCCACGATCCACGCTTTCCACGACATCTACACCTGGGCCGAAGAACGATCCGAG AGATGGGATCAACTGCGCGAAGATCCGATCTTCTTCCAGCGCTGCGTCCATGAAAGCCTGCGCCTGCACCCTGCCAGTCC CGTTGCATGGCGCGCCGCAACTTGTCCGATGAGCCTTCCGGGCGCGGGTGAGGTAGCGGAGGGAGAGATGGTCGAATTTC GCCTCGCCGAAGCAAACCGCGATCCGGCAGTGTTCGGGCCGGATGCGGACGTCTTCAACCCGTACCGCACGGTGAAAGCC CCCACCCTGCCGTTTGGTCATACGTTTGGCACCGGTGTGCACACCTGCCTTGGCCGCGATCTGGATGGCGGTGCCGTGCC CAAGGGCGATGTTGACCCTGAAACGCACCCCTACGGCACGATCACCTTGCTGCTGCGCGAACTCTTTGCCCATGGCGCAC GGCCGGACCCCACCGATCCCCCACAAATCTCCACCAAAACAGAACGGCCCAACTGGGGCCACTACCCGATCATCTTTGAT CCCAAGAAGGCATGGCGATGA
Upstream 100 bases:
>100_bases GTGACATCCAGCTCTGAACCAGCTCCAAGAAGTATTGTTGCCAATAAGATCAATATGAATGTAACGTTCCTCCGAAGCAT TTGGCCTGGGGAGGCGCGCA
Downstream 100 bases:
>100_bases AAACCGCTTTGGTAACCGGCGGCAGCGGCGACATAGGCCGCGCCATTGGGCAAGTCCTGATCGACGATGGCTACCGCGTG GGCCTGCTTGATCTGGATCA
Product: cytochrome P450-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 406; Mature: 405
Protein sequence:
>406_residues MAWPHIITDMHDISAGLRHPDLKQALYDDGAVIMADTLLTLHGEPHRNRRKLEFRVFRKDYFHWYERTVFPDTVRSSLSD DLAAGRSELVDLGYRVTMNLTADFAGIDRPEQSAEETGRLLRLVATFSEGATIVHSKRPKDDVRAEVRAAIADFEPHFLS ASVARRRALLADHAAGRIDEDALPRDVLTVILRDGDPTEFTPEVLTREIGFYLQAGAHSTANSTIHAFHDIYTWAEERSE RWDQLREDPIFFQRCVHESLRLHPASPVAWRAATCPMSLPGAGEVAEGEMVEFRLAEANRDPAVFGPDADVFNPYRTVKA PTLPFGHTFGTGVHTCLGRDLDGGAVPKGDVDPETHPYGTITLLLRELFAHGARPDPTDPPQISTKTERPNWGHYPIIFD PKKAWR
Sequences:
>Translated_406_residues MAWPHIITDMHDISAGLRHPDLKQALYDDGAVIMADTLLTLHGEPHRNRRKLEFRVFRKDYFHWYERTVFPDTVRSSLSD DLAAGRSELVDLGYRVTMNLTADFAGIDRPEQSAEETGRLLRLVATFSEGATIVHSKRPKDDVRAEVRAAIADFEPHFLS ASVARRRALLADHAAGRIDEDALPRDVLTVILRDGDPTEFTPEVLTREIGFYLQAGAHSTANSTIHAFHDIYTWAEERSE RWDQLREDPIFFQRCVHESLRLHPASPVAWRAATCPMSLPGAGEVAEGEMVEFRLAEANRDPAVFGPDADVFNPYRTVKA PTLPFGHTFGTGVHTCLGRDLDGGAVPKGDVDPETHPYGTITLLLRELFAHGARPDPTDPPQISTKTERPNWGHYPIIFD PKKAWR >Mature_405_residues AWPHIITDMHDISAGLRHPDLKQALYDDGAVIMADTLLTLHGEPHRNRRKLEFRVFRKDYFHWYERTVFPDTVRSSLSDD LAAGRSELVDLGYRVTMNLTADFAGIDRPEQSAEETGRLLRLVATFSEGATIVHSKRPKDDVRAEVRAAIADFEPHFLSA SVARRRALLADHAAGRIDEDALPRDVLTVILRDGDPTEFTPEVLTREIGFYLQAGAHSTANSTIHAFHDIYTWAEERSER WDQLREDPIFFQRCVHESLRLHPASPVAWRAATCPMSLPGAGEVAEGEMVEFRLAEANRDPAVFGPDADVFNPYRTVKAP TLPFGHTFGTGVHTCLGRDLDGGAVPKGDVDPETHPYGTITLLLRELFAHGARPDPTDPPQISTKTERPNWGHYPIIFDP KKAWR
Specific function: Unknown
COG id: COG2124
COG function: function code Q; Cytochrome P450
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45594; Mature: 45462
Theoretical pI: Translated: 6.00; Mature: 6.00
Prosite motif: PS00086 CYTOCHROME_P450
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAWPHIITDMHDISAGLRHPDLKQALYDDGAVIMADTLLTLHGEPHRNRRKLEFRVFRKD CCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEEHHHEECCCCCCCCHHHHHHHHHHH YFHWYERTVFPDTVRSSLSDDLAAGRSELVDLGYRVTMNLTADFAGIDRPEQSAEETGRL HHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHCCEEEEEEEEECCCCCCCCHHHHHHHHHH LRLVATFSEGATIVHSKRPKDDVRAEVRAAIADFEPHFLSASVARRRALLADHAAGRIDE HHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCC DALPRDVLTVILRDGDPTEFTPEVLTREIGFYLQAGAHSTANSTIHAFHDIYTWAEERSE CCCCHHHHHEEECCCCCCCCCHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHH RWDQLREDPIFFQRCVHESLRLHPASPVAWRAATCPMSLPGAGEVAEGEMVEFRLAEANR HHHHHCCCHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCEEEEEEECCCC DPAVFGPDADVFNPYRTVKAPTLPFGHTFGTGVHTCLGRDLDGGAVPKGDVDPETHPYGT CCCEECCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCHH ITLLLRELFAHGARPDPTDPPQISTKTERPNWGHYPIIFDPKKAWR HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHCC >Mature Secondary Structure AWPHIITDMHDISAGLRHPDLKQALYDDGAVIMADTLLTLHGEPHRNRRKLEFRVFRKD CCCHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEEHHHEECCCCCCCCHHHHHHHHHHH YFHWYERTVFPDTVRSSLSDDLAAGRSELVDLGYRVTMNLTADFAGIDRPEQSAEETGRL HHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHCCEEEEEEEEECCCCCCCCHHHHHHHHHH LRLVATFSEGATIVHSKRPKDDVRAEVRAAIADFEPHFLSASVARRRALLADHAAGRIDE HHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCC DALPRDVLTVILRDGDPTEFTPEVLTREIGFYLQAGAHSTANSTIHAFHDIYTWAEERSE CCCCHHHHHEEECCCCCCCCCHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHH RWDQLREDPIFFQRCVHESLRLHPASPVAWRAATCPMSLPGAGEVAEGEMVEFRLAEANR HHHHHCCCHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCEEEEEEECCCC DPAVFGPDADVFNPYRTVKAPTLPFGHTFGTGVHTCLGRDLDGGAVPKGDVDPETHPYGT CCCEECCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCHH ITLLLRELFAHGARPDPTDPPQISTKTERPNWGHYPIIFDPKKAWR HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA